Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37490 | Canola | mitochondrion | 79.21 | 83.93 |
| Bra021512.1-P | Field mustard | plastid | 97.19 | 44.13 |
| CDY43734 | Canola | mitochondrion, nucleus, plastid, vacuole | 36.52 | 33.51 |
| CDY45456 | Canola | cytosol | 37.08 | 28.09 |
| CDY32393 | Canola | mitochondrion | 35.96 | 27.35 |
| CDY65844 | Canola | extracellular | 38.2 | 25.47 |
| CDY01863 | Canola | cytosol | 32.58 | 23.29 |
| CDY70726 | Canola | cytosol | 28.09 | 22.52 |
| CDY37492 | Canola | cytosol | 26.97 | 22.12 |
| CDY69763 | Canola | cytosol | 30.9 | 21.57 |
| CDY57669 | Canola | cytosol | 47.19 | 21.27 |
| CDX84915 | Canola | cytosol | 39.33 | 20.83 |
| CDY37477 | Canola | nucleus | 21.35 | 20.32 |
| CDX82226 | Canola | cytosol | 29.78 | 20.15 |
| CDY43733 | Canola | cytosol | 36.52 | 20.0 |
| CDY23772 | Canola | cytosol | 29.78 | 19.92 |
| CDY67865 | Canola | cytosol | 54.49 | 19.64 |
| CDY43729 | Canola | cytosol | 39.89 | 18.49 |
| CDY22955 | Canola | cytosol | 20.22 | 18.18 |
| CDY62603 | Canola | cytosol | 38.76 | 18.16 |
| CDY67602 | Canola | cytosol | 36.52 | 17.96 |
| CDY25355 | Canola | cytosol | 35.96 | 17.25 |
| CDY67601 | Canola | cytosol | 36.52 | 17.02 |
| CDY32394 | Canola | cytosol | 36.52 | 17.02 |
| CDY71800 | Canola | cytosol | 35.39 | 16.58 |
| CDX80282 | Canola | cytosol | 35.96 | 16.54 |
| CDY40874 | Canola | mitochondrion | 34.83 | 16.53 |
| CDY33027 | Canola | cytosol | 35.39 | 16.49 |
| CDX78894 | Canola | cytosol | 34.27 | 16.4 |
| CDY17608 | Canola | cytosol | 37.08 | 16.26 |
| CDY03068 | Canola | nucleus | 37.08 | 16.22 |
| CDY71567 | Canola | cytosol | 36.52 | 16.17 |
| CDY56208 | Canola | nucleus | 35.39 | 15.91 |
| CDY07015 | Canola | cytosol | 34.27 | 15.84 |
| CDX82277 | Canola | cytosol | 35.39 | 15.83 |
| CDY19516 | Canola | cytosol | 30.9 | 15.62 |
| CDY33422 | Canola | cytosol | 37.08 | 15.57 |
| CDX93257 | Canola | cytosol | 33.71 | 15.42 |
| CDY03069 | Canola | plastid | 38.2 | 15.25 |
| CDY43730 | Canola | cytosol | 21.35 | 14.96 |
| CDY17609 | Canola | plastid | 37.08 | 14.9 |
| CDX82230 | Canola | cytosol | 33.71 | 14.85 |
| CDX87320 | Canola | cytosol, extracellular, mitochondrion, nucleus | 29.78 | 14.85 |
| CDY69271 | Canola | cytosol | 29.78 | 14.56 |
| CDY68693 | Canola | cytosol | 35.39 | 13.1 |
| CDX72756 | Canola | cytosol | 28.65 | 12.2 |
| CDX99431 | Canola | cytosol | 6.74 | 6.0 |
| CDX94566 | Canola | cytosol | 6.18 | 5.07 |
| CDY37491 | Canola | cytosol | 2.25 | 4.12 |
| CDY70218 | Canola | plastid | 1.69 | 3.85 |
| CDY45455 | Canola | cytosol | 2.25 | 3.77 |
| CDY43731 | Canola | cytosol | 3.37 | 3.43 |
| CDX78893 | Canola | cytosol | 2.25 | 2.47 |
Protein Annotations
| EnsemblPlants:CDY70219 | EnsemblPlantsGene:GSBRNA2T00097355001 | InterPro:F-box-assoc_dom_typ1 | InterPro:F-box-assoc_interact_dom | PFAM:PF07734 | ProteinID:CDY70219 |
| ProteinID:CDY70219.1 | SEG:seg | TIGRFAMs:TIGR01640 | UniParc:UPI0004EE29BA | UniProt:A0A078JTS2 | MapMan:35.1 |
Description
BnaAnng33000DBnaAnng33000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JTS2]
Coordinates
chrLK041519:+:1349..2038
Molecular Weight (calculated)
20419.8 Da
IEP (calculated)
8.296
GRAVY (calculated)
-0.088
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLGYEIFDL SANTWKRFRK LLPLPFKSYY SDKLVLSCVR EEQLAVLHYS WVMGQALEIW VTKKIDPGEV SWSKFLRLTS WCMGDILPGS FFIDEEKKVV
101: VVVYEIRILT GRNQSAHILG PDGYFKSVNI GETRYIGRRI KHGYMISELC GPLVCSSYVP SSVQLQTNQP VKSEEGEN
101: VVVYEIRILT GRNQSAHILG PDGYFKSVNI GETRYIGRRI KHGYMISELC GPLVCSSYVP SSVQLQTNQP VKSEEGEN
001: MTTMGDLPGD LVEEILSRVP LTSLRAIRST CQKWNSLSKS QICGRKATAA ENKFLGFMMK DSRVCSMKFD LQGIRNDDGE LVEPSIKQVS KLDQIEVSQV
101: FHCDGLVLCI IKDNTGLLVW NPYLGQTRWI HPRNNYQIED RYALGYDNNR NHKILRIFDL YPSSNRVFGY EVYDFSSNSW KVLDVIPEWD IQSHFRGASL
201: KGNAYFPAQK KETVGGIKTI NIEDVLLCFD FTRERFGPPL PLPFHSYNAD FFVSLACVRE EQLAVLYQRW GAFETIEICV TNKIDPNTVS WSKFLITSTG
301: FPVDTFSGSF FIDEEKKVAV VFDLDRYKPT ETCRYQIVYI IGQDEYFKSV NMGVAPNIAK NSYQAYCVPL VCSSSYVPSL VQLQINKPGK RKESN
101: FHCDGLVLCI IKDNTGLLVW NPYLGQTRWI HPRNNYQIED RYALGYDNNR NHKILRIFDL YPSSNRVFGY EVYDFSSNSW KVLDVIPEWD IQSHFRGASL
201: KGNAYFPAQK KETVGGIKTI NIEDVLLCFD FTRERFGPPL PLPFHSYNAD FFVSLACVRE EQLAVLYQRW GAFETIEICV TNKIDPNTVS WSKFLITSTG
301: FPVDTFSGSF FIDEEKKVAV VFDLDRYKPT ETCRYQIVYI IGQDEYFKSV NMGVAPNIAK NSYQAYCVPL VCSSSYVPSL VQLQINKPGK RKESN
Arabidopsis Description
F-box/kelch-repeat protein At3g13680 [Source:UniProtKB/Swiss-Prot;Acc:Q9LID1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.