Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82277 | Canola | cytosol | 96.86 | 62.06 |
| CDY22955 | Canola | cytosol | 43.14 | 55.56 |
| CDX82230 | Canola | cytosol | 80.39 | 50.74 |
| CDY70218 | Canola | plastid | 14.9 | 48.72 |
| CDY37491 | Canola | cytosol | 16.47 | 43.3 |
| CDY45455 | Canola | cytosol | 17.25 | 41.51 |
| CDY33422 | Canola | cytosol | 69.02 | 41.51 |
| AT3G20030.1 | Thale cress | cytosol | 60.0 | 38.06 |
| CDY37492 | Canola | cytosol | 30.98 | 36.41 |
| CDY25355 | Canola | cytosol | 52.94 | 36.39 |
| CDY23772 | Canola | cytosol | 37.65 | 36.09 |
| CDX82226 | Canola | cytosol | 36.86 | 35.74 |
| AT5G60560.2 | Thale cress | cytosol | 55.69 | 34.89 |
| CDY37477 | Canola | nucleus | 22.75 | 31.02 |
| CDY70219 | Canola | cytosol | 21.57 | 30.9 |
| CDY43734 | Canola | mitochondrion, nucleus, plastid, vacuole | 23.14 | 30.41 |
| CDY33027 | Canola | cytosol | 44.71 | 29.84 |
| CDY37490 | Canola | mitochondrion | 19.61 | 29.76 |
| CDY71800 | Canola | cytosol | 44.31 | 29.74 |
| CDY43733 | Canola | cytosol | 37.65 | 29.54 |
| CDY07015 | Canola | cytosol | 44.31 | 29.35 |
| CDX80282 | Canola | cytosol | 43.53 | 28.68 |
| CDY57669 | Canola | cytosol | 43.53 | 28.1 |
| CDX93257 | Canola | cytosol | 42.35 | 27.76 |
| CDY69271 | Canola | cytosol | 39.22 | 27.47 |
| CDX78893 | Canola | cytosol | 17.25 | 27.16 |
| CDY43729 | Canola | cytosol | 40.78 | 27.08 |
| CDX84915 | Canola | cytosol | 35.69 | 27.08 |
| CDY32393 | Canola | mitochondrion | 23.92 | 26.07 |
| CDY67602 | Canola | cytosol | 36.86 | 25.97 |
| CDY19516 | Canola | cytosol | 35.29 | 25.57 |
| CDY03068 | Canola | nucleus | 40.78 | 25.55 |
| CDY67601 | Canola | cytosol | 38.04 | 25.39 |
| CDY17608 | Canola | cytosol | 40.39 | 25.37 |
| CDX87320 | Canola | cytosol, extracellular, mitochondrion, nucleus | 35.29 | 25.21 |
| CDY32394 | Canola | cytosol | 37.65 | 25.13 |
| CDY40874 | Canola | mitochondrion | 36.86 | 25.07 |
| CDY62603 | Canola | cytosol | 37.25 | 25.0 |
| CDY43730 | Canola | cytosol | 24.71 | 24.8 |
| CDY70726 | Canola | cytosol | 21.57 | 24.77 |
| CDX78894 | Canola | cytosol | 36.08 | 24.73 |
| CDY43731 | Canola | cytosol | 16.86 | 24.57 |
| CDX99431 | Canola | cytosol | 19.22 | 24.5 |
| CDY71567 | Canola | cytosol | 38.43 | 24.38 |
| CDY45456 | Canola | cytosol | 22.35 | 24.26 |
| CDY03069 | Canola | plastid | 42.35 | 24.22 |
| CDY67865 | Canola | cytosol | 44.71 | 23.08 |
| CDX94566 | Canola | cytosol | 19.61 | 23.04 |
| CDY17609 | Canola | plastid | 40.0 | 23.02 |
| CDY01863 | Canola | cytosol | 21.96 | 22.49 |
| CDY65844 | Canola | extracellular | 22.75 | 21.72 |
| CDX72756 | Canola | cytosol | 33.33 | 20.33 |
| CDY56208 | Canola | nucleus | 30.59 | 19.7 |
| CDY68693 | Canola | cytosol | 30.98 | 16.42 |
Protein Annotations
| EnsemblPlants:CDY69763 | EnsemblPlantsGene:GSBRNA2T00092153001 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-assoc_dom_typ1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | PFAM:PF00646 | PFAM:PF07734 |
| ProteinID:CDY69763 | ProteinID:CDY69763.1 | SMART:SM00256 | SUPFAM:SSF81383 | UniParc:UPI0004EEFFAE | UniProt:A0A078JQD1 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaCnng65220DBnaCnng65220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JQD1]
Coordinates
chrLK040252:-:440..1638
Molecular Weight (calculated)
28892.6 Da
IEP (calculated)
5.022
GRAVY (calculated)
-0.091
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MTIISDLSWD LVEEILSRVP IISLGAVRST CKRWNRLSKN RLLCKAEARR HQFLRFMVKN YKLCSMRFDL HGILDGEEFV DPSIKEITVV DSLNHVKRFG
101: PPLPLPVEHY VDDTGTLSSL RDEKLAVLYQ PTSMSDVQIW VTTKIEPSAV SWVPFLKIDV EPFTGFGFQF HHDGASFFID EEKKVAVVFQ IDESEMTCYD
201: TAYLIGENGY FEKVGLGEAE KPQWSANNVG EYCPLVCSCS FVPSLVHINN ESAGS
101: PPLPLPVEHY VDDTGTLSSL RDEKLAVLYQ PTSMSDVQIW VTTKIEPSAV SWVPFLKIDV EPFTGFGFQF HHDGASFFID EEKKVAVVFQ IDESEMTCYD
201: TAYLIGENGY FEKVGLGEAE KPQWSANNVG EYCPLVCSCS FVPSLVHINN ESAGS
001: MSDLSVDLVG EILSRVPLTS LSAVRCTCKS WNTLSKHQIF GKAELAATKQ FLGFTVMDYK VCSLRFDLQG IRNDGDDFVD HGKSGLKIRN KAHVHNTQKS
101: MILTPVHGGW LRSIPSAERF GPHLPLPVHS YDDVTLSCVR QEQLALLYGN NETDDSLEIW ITNQIDPNAV SWSIFLKVDI KPLIGFPKDF DPGSFFIDEE
201: KKVVVVYDLD GHLYSTKKNC AYQRLYIIGE DGYFTSVKIK CSDSPEFSAY APSLVTYKPT NYAK
101: MILTPVHGGW LRSIPSAERF GPHLPLPVHS YDDVTLSCVR QEQLALLYGN NETDDSLEIW ITNQIDPNAV SWSIFLKVDI KPLIGFPKDF DPGSFFIDEE
201: KKVVVVYDLD GHLYSTKKNC AYQRLYIIGE DGYFTSVKIK CSDSPEFSAY APSLVTYKPT NYAK
Arabidopsis Description
EDA1F-box associated ubiquitination effector family protein [Source:TAIR;Acc:AT1G59680]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.