Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71800 | Canola | cytosol | 91.47 | 93.16 |
| CDY33027 | Canola | cytosol | 91.21 | 92.41 |
| Bra002578.1-P | Field mustard | cytosol | 88.37 | 91.94 |
| CDY07015 | Canola | cytosol | 79.59 | 80.0 |
| CDX93257 | Canola | cytosol | 77.78 | 77.38 |
| CDX78893 | Canola | cytosol | 19.64 | 46.91 |
| AT4G17200.1 | Thale cress | cytosol | 45.48 | 46.19 |
| CDX82230 | Canola | cytosol | 47.55 | 45.54 |
| CDX82277 | Canola | cytosol | 45.74 | 44.47 |
| CDY70218 | Canola | plastid | 8.79 | 43.59 |
| CDY69763 | Canola | cytosol | 28.68 | 43.53 |
| CDY22955 | Canola | cytosol | 22.22 | 43.43 |
| CDY25355 | Canola | cytosol | 41.09 | 42.86 |
| CDX99431 | Canola | cytosol | 21.96 | 42.5 |
| CDY37492 | Canola | cytosol | 23.51 | 41.94 |
| CDY33422 | Canola | cytosol | 45.74 | 41.75 |
| CDY45455 | Canola | cytosol | 11.37 | 41.51 |
| CDY43730 | Canola | cytosol | 27.13 | 41.34 |
| CDY43731 | Canola | cytosol | 18.6 | 41.14 |
| CDY17608 | Canola | cytosol | 43.15 | 41.13 |
| CDY03068 | Canola | nucleus | 42.89 | 40.79 |
| CDY43729 | Canola | cytosol | 39.79 | 40.1 |
| CDY67602 | Canola | cytosol | 37.47 | 40.06 |
| CDY37477 | Canola | nucleus | 18.86 | 39.04 |
| CDY03069 | Canola | plastid | 44.44 | 38.56 |
| CDY43733 | Canola | cytosol | 32.3 | 38.46 |
| CDY32393 | Canola | mitochondrion | 23.0 | 38.03 |
| CDY32394 | Canola | cytosol | 37.47 | 37.96 |
| CDY71567 | Canola | cytosol | 39.28 | 37.81 |
| CDY19516 | Canola | cytosol | 34.11 | 37.5 |
| CDY17609 | Canola | plastid | 42.89 | 37.47 |
| CDY67601 | Canola | cytosol | 36.69 | 37.17 |
| CDY37491 | Canola | cytosol | 9.3 | 37.11 |
| CDX78894 | Canola | cytosol | 35.14 | 36.56 |
| CDX82226 | Canola | cytosol | 24.55 | 36.12 |
| CDY62603 | Canola | cytosol | 35.4 | 36.05 |
| CDY70219 | Canola | cytosol | 16.54 | 35.96 |
| CDX94566 | Canola | cytosol | 19.9 | 35.48 |
| CDX84915 | Canola | cytosol | 30.49 | 35.12 |
| CDY23772 | Canola | cytosol | 24.03 | 34.96 |
| CDY69271 | Canola | cytosol | 32.04 | 34.07 |
| CDY43734 | Canola | mitochondrion, nucleus, plastid, vacuole | 17.05 | 34.02 |
| CDY01863 | Canola | cytosol | 21.71 | 33.73 |
| CDY40874 | Canola | mitochondrion | 32.56 | 33.6 |
| CDY45456 | Canola | cytosol | 20.16 | 33.19 |
| CDX87320 | Canola | cytosol, extracellular, mitochondrion, nucleus | 30.23 | 32.77 |
| CDY37490 | Canola | mitochondrion | 13.95 | 32.14 |
| CDY56208 | Canola | nucleus | 32.56 | 31.82 |
| CDY67865 | Canola | cytosol | 40.57 | 31.78 |
| CDY65844 | Canola | extracellular | 21.45 | 31.09 |
| CDX72756 | Canola | cytosol | 32.82 | 30.38 |
| CDY70726 | Canola | cytosol | 16.28 | 28.38 |
| CDY57669 | Canola | cytosol | 28.94 | 28.35 |
| CDY68693 | Canola | cytosol | 31.78 | 25.57 |
Protein Annotations
| EnsemblPlants:CDX80282 | EnsemblPlantsGene:GSBRNA2T00133279001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-assoc_dom_typ1 |
| InterPro:F-box-assoc_interact_dom | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | PANTHER:PTHR31790 | PFAM:PF00646 |
| PFAM:PF07734 | ProteinID:CDX80282 | ProteinID:CDX80282.1 | SUPFAM:SSF81383 | TIGRFAMs:TIGR01640 | UniParc:UPI0004EDF422 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC09g34600D
Coordinates
chrLK031820:-:1190874..1192037
Molecular Weight (calculated)
44606.8 Da
IEP (calculated)
5.908
GRAVY (calculated)
-0.181
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTISDLSRD LIGDILSKVP ITCVGKVRCT CKQWNASSRH RIFGKAVARQ FMGFMMMDFK VCSVRIDLNG IVKDEEGSGP VSTKPIDKLN KIEISKVFHC
101: DGLLLCTTRD NTRLLVWNPY LGQMKWIEPK TAYHRLDRYA LGYDTNKKSY KILRFVDDAY WPTPLFEFEI YDMNSNLWRA LDVTPDWDNE FFRPGLTVKG
201: NTYFFAKQKI ILDEGEADED VDDFLVSFDF TKERFGPHLH VPFHSRLHGD TVVLSSVGEE KLAALYQCMD INMMEIWVTT KIEPHAVSWS KLYFLAVDKM
301: VPLLSGSFFI DEEKKLALAF TLDTLGRYKR AYIIGEDEYF KQVDLGEAVV IPDDDDYPYC FPLVCSYVPS LVQINQGLVL SGKRKER
101: DGLLLCTTRD NTRLLVWNPY LGQMKWIEPK TAYHRLDRYA LGYDTNKKSY KILRFVDDAY WPTPLFEFEI YDMNSNLWRA LDVTPDWDNE FFRPGLTVKG
201: NTYFFAKQKI ILDEGEADED VDDFLVSFDF TKERFGPHLH VPFHSRLHGD TVVLSSVGEE KLAALYQCMD INMMEIWVTT KIEPHAVSWS KLYFLAVDKM
301: VPLLSGSFFI DEEKKLALAF TLDTLGRYKR AYIIGEDEYF KQVDLGEAVV IPDDDDYPYC FPLVCSYVPS LVQINQGLVL SGKRKER
001: MTTMGDLPGD LVEEILSRVP LTSLRAIRST CQKWNSLSKS QICGRKATAA ENKFLGFMMK DSRVCSMKFD LQGIRNDDGE LVEPSIKQVS KLDQIEVSQV
101: FHCDGLVLCI IKDNTGLLVW NPYLGQTRWI HPRNNYQIED RYALGYDNNR NHKILRIFDL YPSSNRVFGY EVYDFSSNSW KVLDVIPEWD IQSHFRGASL
201: KGNAYFPAQK KETVGGIKTI NIEDVLLCFD FTRERFGPPL PLPFHSYNAD FFVSLACVRE EQLAVLYQRW GAFETIEICV TNKIDPNTVS WSKFLITSTG
301: FPVDTFSGSF FIDEEKKVAV VFDLDRYKPT ETCRYQIVYI IGQDEYFKSV NMGVAPNIAK NSYQAYCVPL VCSSSYVPSL VQLQINKPGK RKESN
101: FHCDGLVLCI IKDNTGLLVW NPYLGQTRWI HPRNNYQIED RYALGYDNNR NHKILRIFDL YPSSNRVFGY EVYDFSSNSW KVLDVIPEWD IQSHFRGASL
201: KGNAYFPAQK KETVGGIKTI NIEDVLLCFD FTRERFGPPL PLPFHSYNAD FFVSLACVRE EQLAVLYQRW GAFETIEICV TNKIDPNTVS WSKFLITSTG
301: FPVDTFSGSF FIDEEKKVAV VFDLDRYKPT ETCRYQIVYI IGQDEYFKSV NMGVAPNIAK NSYQAYCVPL VCSSSYVPSL VQLQINKPGK RKESN
Arabidopsis Description
F-box/kelch-repeat protein At3g13680 [Source:UniProtKB/Swiss-Prot;Acc:Q9LID1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.