CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004262.1-P	Field mustard	cytosol, nucleus, peroxisome	98.48	98.98
CDY01863	Canola	cytosol	49.24	78.31
CDX72756	Canola	cytosol	57.83	54.78
CDY70726	Canola	cytosol	28.03	50.0
CDX87320	Canola	cytosol, extracellular, mitochondrion, nucleus	42.42	47.06
CDY32393	Canola	mitochondrion	22.73	38.46
CDY43734	Canola	mitochondrion, nucleus, plastid, vacuole	18.43	37.63
CDY65844	Canola	extracellular	24.49	36.33
CDY17608	Canola	cytosol	37.12	36.21
CDX82277	Canola	cytosol	36.11	35.93
CDY03068	Canola	nucleus	36.87	35.87
CDY25355	Canola	cytosol	33.59	35.85
CDY43729	Canola	cytosol	34.6	35.68
CDY70219	Canola	cytosol	15.91	35.39
CDX82230	Canola	cytosol	35.35	34.65
CDY43730	Canola	cytosol	22.22	34.65
CDY37492	Canola	cytosol	18.69	34.1
CDY33422	Canola	cytosol	36.36	33.96
CDY67601	Canola	cytosol	32.32	33.51
CDY67602	Canola	cytosol	30.56	33.43
CDY22955	Canola	cytosol	16.67	33.33
CDX84915	Canola	cytosol	28.28	33.33
CDY33027	Canola	cytosol	32.07	33.25
CDY45456	Canola	cytosol	19.7	33.19
CDY43733	Canola	cytosol	27.02	32.92
CDY32394	Canola	cytosol	31.57	32.72
CDY71800	Canola	cytosol	31.31	32.63
CDX80282	Canola	cytosol	31.82	32.56
CDY17609	Canola	plastid	35.86	32.05
CDY03069	Canola	plastid	35.86	31.84
CDY37490	Canola	mitochondrion	13.38	31.55
CDY62603	Canola	cytosol	30.05	31.32
CDY07015	Canola	cytosol	30.05	30.91
CDY69763	Canola	cytosol	19.7	30.59
CDY40874	Canola	mitochondrion	28.54	30.13
CDY71567	Canola	cytosol	30.56	30.1
CDX93257	Canola	cytosol	29.55	30.08
CDX78893	Canola	cytosol	12.12	29.63
CDY19516	Canola	cytosol	26.26	29.55
CDX78894	Canola	cytosol	27.53	29.3
CDY37477	Canola	nucleus	13.64	28.88
CDY69271	Canola	cytosol	26.52	28.85
CDY43731	Canola	cytosol	12.63	28.57
CDX82226	Canola	cytosol	18.94	28.52
CDY23772	Canola	cytosol	18.94	28.2
CDX99431	Canola	cytosol	14.14	28.0
CDY67865	Canola	cytosol	33.84	27.13
CDX94566	Canola	cytosol	14.65	26.73
CDY68693	Canola	cytosol	27.78	22.87
CDY57669	Canola	cytosol	21.97	22.03
CDY37491	Canola	cytosol	5.05	20.62
CDY45455	Canola	cytosol	5.05	18.87
CDY70218	Canola	plastid	3.54	17.95

Protein Annotations

EnsemblPlants:CDY56208	EnsemblPlantsGene:GSBRNA2T00017974001	InterPro:F-box-assoc_dom_typ1	InterPro:F-box-assoc_interact_dom	InterPro:Gal_Oxase/kelch_b-propeller	PANTHER:PTHR44355
PANTHER:PTHR44355:SF1	PFAM:PF07734	ProteinID:CDY56208	ProteinID:CDY56208.1	SUPFAM:SSF50965	TIGRFAMs:TIGR01640
UniParc:UPI0004EF059E	UniProt:A0A078J285	MapMan:35.1	:	:	:

Description

BnaAnng14070DBnaAnng14070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J285]

Coordinates

chrLK033469:+:9622..11075

Molecular Weight (calculated)

45483.8 Da

IEP (calculated)

6.993

GRAVY (calculated)

-0.390

Length

396 amino acids

Sequence
(BLAST)

001: MMSDHGGRKV WGKTKRNRED LEENPNIPIA ARVGRMMKKV SITSEEEEAV GPQQQFLTMN GKVYSLRYQD DFVDASVKEV DLLNELEVSK LYHCDGLVLC
101: VAKDNSELVL WNPYLCQTRW IGPRESFHLS DRHAVGYDEG RNHKILRFWD NFIRNMKRIE VVYEIYEIRS NSWRVLEEVN HEGLIDTHQR GVSVKGNTYF
201: VANHYGLAHK VSLICFDFTK ERFGPRLPLP FDSFDGFNGD LVTLSSFFRG GGDDEQLAVL FGGYESGFFE FWVTLTVHPN RASWSKFLRM EPGPFSGYGF
301: KLYSSFSGGS FFVDEENKFA VLFELYGSKT KTVHAAFVFG QDGFFKSSVN LGQALILEHH HHKAARPPLV CSYRPSFVQV KENERLVSSS HQQTHV

Best Arabidopsis Sequence Match ( AT1G24800.1 )
(BLAST)

001: MRRRRCDLQP KRTRMCDLQP KRTSMCDLPP KLVGEKILTR IPITSLRAVR STCKLWNALT KDRVLGKAAA QFLGFMTMDS KVCSVRFHLR RSKEEEEDTM
101: DLSIKQVDLL NQVEISRVYH CDGLLLCVAK DNSRVVVWNP YLGQTRWIRP RTESNIGDSY ALGYDINRNH KILRMVQTRN VSVYRYEIYD LRSNSWRVLE
201: VTPNGEMDPN HPLYGVSVKG NTYFFAHEDS SSGEIDEDGD IIDLEDFLLC FDFTTETFGL RLPLPFHSTI DATVTLSCVR DQQLAVLYHN EGLHSDDRFT
301: TVEFWVTTSI EPNSVSWSKF LTVDMRPLAL TGVRFDNDMG ATFFIDEDEK VAVVFDLDGY LSTESARYHT AFISGKDGFF KPVTLGVAPN VGEPCPRTGH
401: IPTTYRPPLV CSSTYLPSLV QVNQQRKRKE RHV

Arabidopsis Description

F-box/kelch-repeat protein At1g25211 [Source:UniProtKB/Swiss-Prot;Acc:P0DI06]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.