Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017228.1-P | Field mustard | cytosol | 79.4 | 83.14 |
| CDY43734 | Canola | mitochondrion, nucleus, plastid, vacuole | 46.44 | 63.92 |
| CDY43729 | Canola | cytosol | 61.05 | 42.45 |
| CDY43733 | Canola | cytosol | 46.82 | 38.46 |
| CDY70219 | Canola | cytosol | 25.47 | 38.2 |
| CDY45456 | Canola | cytosol | 31.09 | 35.32 |
| CDY37490 | Canola | mitochondrion | 22.1 | 35.12 |
| CDX84915 | Canola | cytosol | 41.57 | 33.04 |
| CDY32393 | Canola | mitochondrion | 28.84 | 32.91 |
| CDY01863 | Canola | cytosol | 30.34 | 32.53 |
| CDY43730 | Canola | cytosol | 29.59 | 31.1 |
| AT3G13680.1 | Thale cress | cytosol | 44.57 | 30.13 |
| CDY22955 | Canola | cytosol | 20.97 | 28.28 |
| CDY62603 | Canola | cytosol | 40.07 | 28.16 |
| CDY70726 | Canola | cytosol | 22.1 | 26.58 |
| CDY40874 | Canola | mitochondrion | 34.83 | 24.8 |
| CDY25355 | Canola | cytosol | 34.08 | 24.53 |
| CDY56208 | Canola | nucleus | 36.33 | 24.49 |
| CDY17608 | Canola | cytosol | 36.7 | 24.14 |
| CDX82277 | Canola | cytosol | 35.96 | 24.12 |
| CDY03068 | Canola | nucleus | 35.58 | 23.34 |
| CDX82230 | Canola | cytosol | 35.21 | 23.27 |
| CDX78894 | Canola | cytosol | 32.21 | 23.12 |
| CDY33422 | Canola | cytosol | 36.33 | 22.88 |
| CDY69763 | Canola | cytosol | 21.72 | 22.75 |
| CDY67602 | Canola | cytosol | 30.34 | 22.38 |
| CDY23772 | Canola | cytosol | 22.1 | 22.18 |
| CDY07015 | Canola | cytosol | 31.84 | 22.08 |
| CDY32394 | Canola | cytosol | 31.46 | 21.99 |
| CDY37477 | Canola | nucleus | 15.36 | 21.93 |
| CDY71800 | Canola | cytosol | 31.09 | 21.84 |
| CDY03069 | Canola | plastid | 36.33 | 21.75 |
| CDY67601 | Canola | cytosol | 31.09 | 21.73 |
| CDX87320 | Canola | cytosol, extracellular, mitochondrion, nucleus | 28.84 | 21.57 |
| CDX80282 | Canola | cytosol | 31.09 | 21.45 |
| CDY17609 | Canola | plastid | 35.58 | 21.44 |
| CDY33027 | Canola | cytosol | 30.34 | 21.2 |
| CDY37492 | Canola | cytosol | 17.23 | 21.2 |
| CDY19516 | Canola | cytosol | 27.72 | 21.02 |
| CDX93257 | Canola | cytosol | 30.34 | 20.82 |
| CDX72756 | Canola | cytosol | 31.09 | 19.86 |
| CDY68693 | Canola | cytosol | 35.21 | 19.54 |
| CDX82226 | Canola | cytosol | 19.1 | 19.39 |
| CDY69271 | Canola | cytosol | 25.84 | 18.96 |
| CDY71567 | Canola | cytosol | 28.46 | 18.91 |
| CDY67865 | Canola | cytosol | 34.46 | 18.62 |
| CDY57669 | Canola | cytosol | 26.59 | 17.97 |
| CDY43731 | Canola | cytosol | 7.49 | 11.43 |
| CDX94566 | Canola | cytosol | 8.99 | 11.06 |
| CDX99431 | Canola | cytosol | 7.12 | 9.5 |
| CDY45455 | Canola | cytosol | 2.62 | 6.6 |
| CDY37491 | Canola | cytosol | 2.25 | 6.19 |
| CDX78893 | Canola | cytosol | 3.75 | 6.17 |
| CDY70218 | Canola | plastid | 1.12 | 3.85 |
Protein Annotations
| EnsemblPlants:CDY65844 | EnsemblPlantsGene:GSBRNA2T00048346001 | InterPro:F-box-assoc_dom_typ1 | InterPro:F-box-assoc_interact_dom | PFAM:PF07734 | ProteinID:CDY65844 |
| ProteinID:CDY65844.1 | SEG:seg | TIGRFAMs:TIGR01640 | UniParc:UPI0004EECE5C | UniProt:A0A078JGN2 | MapMan:35.1 |
Description
BnaAnng21160DBnaAnng21160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JGN2]
Coordinates
chrLK034974:+:13789..19926
Molecular Weight (calculated)
30446.7 Da
IEP (calculated)
9.434
GRAVY (calculated)
-0.096
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MINVMACCYA SLWIALGIEP RLSSFYRSDR FAFGYDNNLN HKILITSKHV SGELYDFTSS SWKVLDDVTP EWMIRPHRDS VSLKGNAYFL TNLRGFFICF
101: DFTTESFGPL LPLPLRPGHG GVSVSLSCVR EDQLAVLYQH SDKTIEISVT DKIGPDVVSW TKFLKLLTGF RVNPNYGSFF IDEKKKIAVV FVLERAKACR
201: YQTAHVNGQN GYFKSVRIRE APYLQNGSSP RKKYHPPPLC SSYLPSFTAT QPTRLMETNV IIFFRII
101: DFTTESFGPL LPLPLRPGHG GVSVSLSCVR EDQLAVLYQH SDKTIEISVT DKIGPDVVSW TKFLKLLTGF RVNPNYGSFF IDEKKKIAVV FVLERAKACR
201: YQTAHVNGQN GYFKSVRIRE APYLQNGSSP RKKYHPPPLC SSYLPSFTAT QPTRLMETNV IIFFRII
001: MRRRRCDLQP KRTRMCDLQP KRTSMCDLPP KLVGEKILTR IPITSLRAVR STCKLWNALT KDRVLGKAAA QFLGFMTMDS KVCSVRFHLR RSKEEEEDTM
101: DLSIKQVDLL NQVEISRVYH CDGLLLCVAK DNSRVVVWNP YLGQTRWIRP RTESNIGDSY ALGYDINRNH KILRMVQTRN VSVYRYEIYD LRSNSWRVLE
201: VTPNGEMDPN HPLYGVSVKG NTYFFAHEDS SSGEIDEDGD IIDLEDFLLC FDFTTETFGL RLPLPFHSTI DATVTLSCVR DQQLAVLYHN EGLHSDDRFT
301: TVEFWVTTSI EPNSVSWSKF LTVDMRPLAL TGVRFDNDMG ATFFIDEDEK VAVVFDLDGY LSTESARYHT AFISGKDGFF KPVTLGVAPN VGEPCPRTGH
401: IPTTYRPPLV CSSTYLPSLV QVNQQRKRKE RHV
101: DLSIKQVDLL NQVEISRVYH CDGLLLCVAK DNSRVVVWNP YLGQTRWIRP RTESNIGDSY ALGYDINRNH KILRMVQTRN VSVYRYEIYD LRSNSWRVLE
201: VTPNGEMDPN HPLYGVSVKG NTYFFAHEDS SSGEIDEDGD IIDLEDFLLC FDFTTETFGL RLPLPFHSTI DATVTLSCVR DQQLAVLYHN EGLHSDDRFT
301: TVEFWVTTSI EPNSVSWSKF LTVDMRPLAL TGVRFDNDMG ATFFIDEDEK VAVVFDLDGY LSTESARYHT AFISGKDGFF KPVTLGVAPN VGEPCPRTGH
401: IPTTYRPPLV CSSTYLPSLV QVNQQRKRKE RHV
Arabidopsis Description
F-box/kelch-repeat protein At1g25211 [Source:UniProtKB/Swiss-Prot;Acc:P0DI06]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.