Factsheet for AT1G33475.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028003.1-P	Field mustard	nucleus	78.04	75.09
CDX93763	Canola	cytosol, nucleus, plastid	77.25	74.62
CDY15276	Canola	nucleus	76.86	67.82
CDY70770	Canola	nucleus	76.86	67.82
AT4G10170.1	Thale cress	cytosol	59.22	59.45
KRH56413	Soybean	cytosol	47.45	43.53
VIT_18s0089g00870.t01	Wine grape	nucleus	40.39	42.21
PGSC0003DMT400083261	Potato	cytosol	38.43	40.5
Solyc06g064430.1.1	Tomato	cytosol	37.25	39.42
KRH62495	Soybean	cytosol	43.53	36.76
GSMUA_Achr8P32370_001	Banana	cytosol	36.86	34.43
Os08t0110300-01	Rice	cytosol, mitochondrion, nucleus	34.12	31.41
HORVU7Hr1G076840.1	Barley	mitochondrion, nucleus, peroxisome	33.73	31.05
TraesCS7D01G318000.1	Wheat	mitochondrion, nucleus, peroxisome	33.33	30.69
TraesCS7B01G221800.1	Wheat	nucleus	32.94	30.32
EES14394	Sorghum	mitochondrion	30.59	26.53
AT4G27840.1	Thale cress	plasma membrane	23.14	22.69
AT5G52990.1	Thale cress	extracellular, plasma membrane	22.75	21.32
TraesCS7A01G321000.1	Wheat	cytosol, golgi, plasma membrane	32.55	21.28
Zm00001d000424_P001	Maize	plastid	31.37	20.05

Protein Annotations

MapMan:22.7.6	Gene3D:3.30.450.50	EntrezGene:840241	UniProt:A0A178WEZ1	ProteinID:AAG51221.1	ProteinID:AEE31598.1
ArrayExpress:AT1G33475	EnsemblPlantsGene:AT1G33475	RefSeq:AT1G33475	TAIR:AT1G33475	RefSeq:AT1G33475-TAIR-G	EnsemblPlants:AT1G33475.1
TAIR:AT1G33475.1	EMBL:BT003879	EMBL:BT015121	ncoils:Coil	GO:GO:0000149	GO:GO:0003674
GO:GO:0005484	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0006906	GO:GO:0008150	GO:GO:0009987
GO:GO:0015031	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016192	GO:GO:0031201
InterPro:IPR010908	InterPro:Longin-like_dom_sf	InterPro:Longin_dom	RefSeq:NP_683346.3	ProteinID:OAP16341.1	PO:PO:0000230
PO:PO:0000293	PO:PO:0007616	PO:PO:0009030	PO:PO:0009031	PO:PO:0020038	PO:PO:0025281
PANTHER:PTHR21136	PANTHER:PTHR21136:SF162	UniProt:Q84WF5	SMART:SM01270	SUPFAM:SSF64356	TMHMM:TMhelix
UniParc:UPI000000C1BB	SEG:seg	:	:	:	:

Description

PHYL1.2Phytolongin Phyl1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q84WF5]

Coordinates

chr1:-:12147188..12148380

Molecular Weight (calculated)

28774.1 Da

IEP (calculated)

9.073

GRAVY (calculated)

-0.536

Length

255 amino acids

Sequence
(BLAST)

001: MGSIQNTVHY CCVSRDNQIM YAYNNAGDHR NNESLAALCL EKTPPFHKWY FETRGKKTFG FLMKDDFVYF AIVDDVFKKS SVLDFLEKLR DELKEANKKN
101: SRGSFSGSIS FSNVQDQIVR RLIASLEFDH TCLPLSSPSI DGAEQSYASN SKAPLLGRSN KQDKKKGRDH AHSLRGIEIE EHRKSNDRGN VTECSNASSE
201: SATYVPRRGR SGGSQSIERK WRRQVKIVLA IDIAICLTLL GVWLAICHGI ECTRS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.