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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, nucleus

Predictor Summary:
  • plastid 1
  • nucleus 2
  • mitochondrion 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, nucleus, peroxisome
Any Predictor:mitochondrion, nucleus, peroxisome, plastid
BaCelLo:plastid
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G221800.1 Wheat nucleus 95.31 95.31
TraesCS7D01G318000.1 Wheat mitochondrion, nucleus, peroxisome 94.58 94.58
Os08t0110300-01 Rice cytosol, mitochondrion, nucleus 75.81 75.81
EES14394 Sorghum mitochondrion 72.56 68.37
TraesCS7A01G321000.1 Wheat cytosol, golgi, plasma membrane 86.28 61.28
GSMUA_Achr8P32370_001 Banana cytosol 54.51 55.31
Zm00001d000424_P001 Maize plastid 70.76 49.12
AT4G10170.1 Thale cress cytosol 33.57 36.61
KRH56413 Soybean cytosol 35.38 35.25
VIT_18s0089g00870.t01 Wine grape nucleus 30.69 34.84
AT1G33475.1 Thale cress cytosol 31.05 33.73
PGSC0003DMT400083261 Potato cytosol 29.24 33.47
Solyc06g064430.1.1 Tomato cytosol 28.88 33.2
CDX93763 Canola cytosol, nucleus, plastid 30.69 32.2
Bra028003.1-P Field mustard nucleus 30.69 32.08
CDY05086 Canola cytosol, extracellular, nucleus 28.88 31.13
CDX90746 Canola cytosol, extracellular, nucleus 28.88 31.13
Bra000701.1-P Field mustard cytosol, extracellular, nucleus 28.88 31.13
KRH62495 Soybean cytosol 33.21 30.46
CDY15276 Canola nucleus 30.32 29.07
CDY70770 Canola nucleus 30.32 29.07
Protein Annotations
EnsemblPlants:HORVU7Hr1G076840.1EnsemblPlantsGene:HORVU7Hr1G076840Gene3D:3.30.450.50GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0016192InterPro:IPR010908InterPro:Longin-like_dom_sfInterPro:Longin_dom
PANTHER:PTHR21136PANTHER:PTHR21136:SF88PFscan:PS50859SEG:segSMART:SM01270SUPFAM:SSF64356
TMHMM:TMhelixUniParc:UPI0002957DE2UniProt:M0ULA5MapMan:22.7.6::
Description
No Description!
Coordinates
chrchr7H:-:449330061..449332182
Molecular Weight (calculated)
30306.3 Da
IEP (calculated)
9.730
GRAVY (calculated)
-0.403
Length
277 amino acids
Sequence
(BLAST)
001: MNSRRSRSVK LLSSRAKPLE VDVAEEDPRM SSSADNTVYC CIAKGNKVIY SYSSKDGDSQ TEATAALCLE NVPPYHRHYI HTSGSRSYGY LMADGHTFFA
101: IIDPSVGNAG ALQFLERVRD EFRNTNRNGF HDALVPAVQR LVASLEKMPR AALVPEGGAK RGGSNDGSSC TSSKVPLLGK GSGRKDKKKA KEKGMPMGDG
201: DVEHHGTRGV RIDMQPEDVG GMSLERSTSQ SRLRRQQSSR SLWMRHVKII IIIDVVICLV LFAAWLAVCK GFQCVSG
Best Arabidopsis Sequence Match ( AT4G10170.2 )
(BLAST)
001: MGLIKNTVHY CCVSRDNQIL YSYNGGDQTN ESLAALCLEK SPPFHTWYFE TIGKRRFGFL IGDGFVYFAI VDEVLKRSSV LKFLEHLRDE FKKAARENSR
101: GSFTAMIGSI NVEDQLVPVV TRLIASLERV AESSSNNELK SSNLGEQSEG SNSTKAPLLG RLSKQEKKKG KDHVIELEEH RKSNDRGNIT DDSAGAGTSL
201: EKECVSSSGR SVTQSFEWKW RRLVQIVLAI DAAICLTLFG IWLAICRGIE CTRS
Arabidopsis Description
PHYL1.1Phytolongin Phyl1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN26]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.