Factsheet for TraesCS7B01G221800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, peroxisome
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G318000.1	Wheat	mitochondrion, nucleus, peroxisome	99.28	99.28
HORVU7Hr1G076840.1	Barley	mitochondrion, nucleus, peroxisome	95.31	95.31
Os08t0110300-01	Rice	cytosol, mitochondrion, nucleus	75.81	75.81
EES14394	Sorghum	mitochondrion	72.92	68.71
TraesCS7A01G321000.1	Wheat	cytosol, golgi, plasma membrane	90.97	64.62
GSMUA_Achr8P32370_001	Banana	cytosol	54.15	54.95
Zm00001d000424_P001	Maize	plastid	71.84	49.87
AT4G10170.1	Thale cress	cytosol	33.57	36.61
KRH56413	Soybean	cytosol	36.1	35.97
VIT_18s0089g00870.t01	Wine grape	nucleus	31.05	35.25
PGSC0003DMT400083261	Potato	cytosol	29.24	33.47
AT1G33475.1	Thale cress	cytosol	30.32	32.94
Solyc06g064430.1.1	Tomato	cytosol	28.52	32.78
CDY05086	Canola	cytosol, extracellular, nucleus	29.24	31.52
CDX90746	Canola	cytosol, extracellular, nucleus	29.24	31.52
Bra000701.1-P	Field mustard	cytosol, extracellular, nucleus	29.24	31.52
CDX93763	Canola	cytosol, nucleus, plastid	29.96	31.44
Bra028003.1-P	Field mustard	nucleus	29.96	31.32
KRH62495	Soybean	cytosol	33.94	31.13
CDY15276	Canola	nucleus	29.6	28.37
CDY70770	Canola	nucleus	29.6	28.37

Protein Annotations

EnsemblPlants:TraesCS7B01G221800.1	EnsemblPlantsGene:TraesCS7B01G221800	Gene3D:3.30.450.50	InterPro:IPR010908	InterPro:Longin-like_dom_sf	InterPro:Longin_dom
PANTHER:PTHR21136	PANTHER:PTHR21136:SF88	PFscan:PS50859	SEG:seg	SUPFAM:SSF64356	TMHMM:TMhelix
MapMan:22.7.6	:	:	:	:	:

Description

No Description!

Coordinates

chr7B:+:413973154..413973987

Molecular Weight (calculated)

30218.1 Da

IEP (calculated)

9.592

GRAVY (calculated)

-0.413

Length

277 amino acids

Sequence
(BLAST)

001: MNSRRSRSVK LLSSRAKPLE VDVAEEDPRM SSSADNTVYC CIAKGNKVIY SYSSKDGDSQ TEATAALCLE NVPPYHRHYI HTSGSRSYGY LMADGHTFFA
101: IIDPSVGNVG ALQFLERVRD EFRNTNRNGF HDALVPAVQR LVASLEKMPR AALVPEGGAQ RGGSNGSSGC TSSKAPLLGK GSGRKDKKKA KEKGMPMGDG
201: DDEHHGTRGL RIDVQPEDVG GMSLERSTSQ SRLRRQQSSR SLWMRHVKII IIVDVLVCVV LFAAWLAVCK GFQCVSG

Best Arabidopsis Sequence Match ( AT4G10170.2 )
(BLAST)

001: MGLIKNTVHY CCVSRDNQIL YSYNGGDQTN ESLAALCLEK SPPFHTWYFE TIGKRRFGFL IGDGFVYFAI VDEVLKRSSV LKFLEHLRDE FKKAARENSR
101: GSFTAMIGSI NVEDQLVPVV TRLIASLERV AESSSNNELK SSNLGEQSEG SNSTKAPLLG RLSKQEKKKG KDHVIELEEH RKSNDRGNIT DDSAGAGTSL
201: EKECVSSSGR SVTQSFEWKW RRLVQIVLAI DAAICLTLFG IWLAICRGIE CTRS

Arabidopsis Description

PHYL1.1Phytolongin Phyl1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN26]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.