Factsheet for TraesCS7A01G321000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
golgi 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plasma membrane
Any Predictor:	cytosol, golgi, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G221800.1	Wheat	nucleus	64.62	90.97
TraesCS7D01G318000.1	Wheat	mitochondrion, nucleus, peroxisome	64.1	90.25
HORVU7Hr1G076840.1	Barley	mitochondrion, nucleus, peroxisome	61.28	86.28
Os08t0110300-01	Rice	cytosol, mitochondrion, nucleus	48.72	68.59
EES14394	Sorghum	mitochondrion	47.44	62.93
GSMUA_Achr8P32370_001	Banana	cytosol	35.38	50.55
Zm00001d000424_P001	Maize	plastid	47.69	46.62
AT4G10170.1	Thale cress	cytosol	23.59	36.22
KRH56413	Soybean	cytosol	25.13	35.25
VIT_18s0089g00870.t01	Wine grape	nucleus	21.54	34.43
PGSC0003DMT400083261	Potato	cytosol	20.51	33.06
AT1G33475.1	Thale cress	cytosol	21.28	32.55
Solyc06g064430.1.1	Tomato	cytosol	20.0	32.37
CDY05086	Canola	cytosol, extracellular, nucleus	20.51	31.13
CDX90746	Canola	cytosol, extracellular, nucleus	20.51	31.13
Bra000701.1-P	Field mustard	cytosol, extracellular, nucleus	20.51	31.13
CDX93763	Canola	cytosol, nucleus, plastid	21.03	31.06
Bra028003.1-P	Field mustard	nucleus	21.03	30.94
KRH62495	Soybean	cytosol	23.59	30.46
CDY15276	Canola	nucleus	21.03	28.37
CDY70770	Canola	nucleus	21.03	28.37

Protein Annotations

EnsemblPlants:TraesCS7A01G321000.1	EnsemblPlantsGene:TraesCS7A01G321000	Gene3D:3.30.450.50	InterPro:IPR010908	InterPro:Longin-like_dom_sf	InterPro:Longin_dom
PANTHER:PTHR21136	PANTHER:PTHR21136:SF88	PFscan:PS50859	SEG:seg	SMART:SM01270	SUPFAM:SSF64356
TMHMM:TMhelix	MapMan:22.7.6	:	:	:	:

Description

No Description!

Coordinates

chr7A:+:463201700..463205876

Molecular Weight (calculated)

42616.7 Da

IEP (calculated)

8.939

GRAVY (calculated)

-0.445

Length

390 amino acids

Sequence
(BLAST)

001: MTETPLWPIT DSGIWIPMLA PTYSMMISSD EPRCRGFNQS CIQFPLSIGH ISNSGVVSHE NKRVEMDLAA LSQTSAGNHD DRTQRNRNLT GKSLRHLPHG
101: QRPSDPPSSP RQAATPFLSR SVKLVSSRAK PLEVDVAEED PRMSSSADNT VYCCIAKGNK VIYSYSSKDG DSQTEATAAL CLENVPPYHR HYIHTSGSRS
201: YGYLMADGHT FFAIIDPSVG HVGALQFLER VQDEFRNTNR NGFHDALVPA VQRLVASLEK MPRAALVPEG GAQRGGSNGS SGCTSSKAPL LGKGSGRKDK
301: KKAKEKGMPM GDGDDEHHGT RGLRIDVQPE DVGGMSLERS TSQSRLRRQQ SSRSLWMRHV KIIIIVDVLV CVVLFAAWLA VCKGFQCVSG

Best Arabidopsis Sequence Match ( AT4G10170.2 )
(BLAST)

001: MGLIKNTVHY CCVSRDNQIL YSYNGGDQTN ESLAALCLEK SPPFHTWYFE TIGKRRFGFL IGDGFVYFAI VDEVLKRSSV LKFLEHLRDE FKKAARENSR
101: GSFTAMIGSI NVEDQLVPVV TRLIASLERV AESSSNNELK SSNLGEQSEG SNSTKAPLLG RLSKQEKKKG KDHVIELEEH RKSNDRGNIT DDSAGAGTSL
201: EKECVSSSGR SVTQSFEWKW RRLVQIVLAI DAAICLTLFG IWLAICRGIE CTRS

Arabidopsis Description

PHYL1.1Phytolongin Phyl1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN26]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.