Factsheet for TraesCS7D01G318000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, nucleus

Predictor Summary:

nucleus 1
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus, peroxisome
Any Predictor:	mitochondrion, nucleus, peroxisome
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G221800.1	Wheat	nucleus	99.28	99.28
HORVU7Hr1G076840.1	Barley	mitochondrion, nucleus, peroxisome	94.58	94.58
Os08t0110300-01	Rice	cytosol, mitochondrion, nucleus	76.17	76.17
EES14394	Sorghum	mitochondrion	72.56	68.37
TraesCS7A01G321000.1	Wheat	cytosol, golgi, plasma membrane	90.25	64.1
GSMUA_Achr8P32370_001	Banana	cytosol	53.79	54.58
Zm00001d000424_P001	Maize	plastid	72.2	50.13
AT4G10170.1	Thale cress	cytosol	33.57	36.61
KRH56413	Soybean	cytosol	36.46	36.33
VIT_18s0089g00870.t01	Wine grape	nucleus	31.41	35.66
PGSC0003DMT400083261	Potato	cytosol	29.6	33.88
AT1G33475.1	Thale cress	cytosol	30.69	33.33
Solyc06g064430.1.1	Tomato	cytosol	28.88	33.2
CDY05086	Canola	cytosol, extracellular, nucleus	29.6	31.91
CDX90746	Canola	cytosol, extracellular, nucleus	29.6	31.91
Bra000701.1-P	Field mustard	cytosol, extracellular, nucleus	29.6	31.91
CDX93763	Canola	cytosol, nucleus, plastid	30.32	31.82
Bra028003.1-P	Field mustard	nucleus	30.32	31.7
KRH62495	Soybean	cytosol	34.3	31.46
CDY15276	Canola	nucleus	29.96	28.72
CDY70770	Canola	nucleus	29.96	28.72

Protein Annotations

EnsemblPlants:TraesCS7D01G318000.1	EnsemblPlantsGene:TraesCS7D01G318000	Gene3D:3.30.450.50	InterPro:IPR010908	InterPro:Longin-like_dom_sf	InterPro:Longin_dom
PANTHER:PTHR21136	PANTHER:PTHR21136:SF88	PFscan:PS50859	SEG:seg	SMART:SM01270	SUPFAM:SSF64356
TMHMM:TMhelix	MapMan:22.7.6	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:405879995..405880828

Molecular Weight (calculated)

30262.1 Da

IEP (calculated)

9.592

GRAVY (calculated)

-0.422

Length

277 amino acids

Sequence
(BLAST)

001: MNSRRSRSVK LLSSRAKPLE VDVAEEDPRM SSSADNTVYC CIAKGNKVIY SYSSKDGDSQ TEATAALCLE NVPPYHRHYI HTSGSRSYGY LMADGHTFFA
101: IIDPSVGNVG ALQFLERVRD EFRNTNRNGF HDTLVPAVQR LVASLEKMPR AALVPEGGAQ RGGSNGSSGC TSSKAPLLGK GSGRKDKKKA KEKGMPMGDG
201: EDEHHGTRGL RIDVQPEDVG GMSLERSTSQ SRLRRQQSSR SLWMRHVKII IIVDVLVCVV LFAAWLAVCK GFQCVSG

Best Arabidopsis Sequence Match ( AT4G10170.2 )
(BLAST)

001: MGLIKNTVHY CCVSRDNQIL YSYNGGDQTN ESLAALCLEK SPPFHTWYFE TIGKRRFGFL IGDGFVYFAI VDEVLKRSSV LKFLEHLRDE FKKAARENSR
101: GSFTAMIGSI NVEDQLVPVV TRLIASLERV AESSSNNELK SSNLGEQSEG SNSTKAPLLG RLSKQEKKKG KDHVIELEEH RKSNDRGNIT DDSAGAGTSL
201: EKECVSSSGR SVTQSFEWKW RRLVQIVLAI DAAICLTLFG IWLAICRGIE CTRS

Arabidopsis Description

PHYL1.1Phytolongin Phyl1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN26]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.