Factsheet for AT3G20740.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53612	Canola	plastid	93.5	93.5
Bra023933.1-P	Field mustard	plastid	93.5	93.5
CDY27567	Canola	plastid	93.22	93.22
VIT_19s0014g05210.t01	Wine grape	plastid	74.25	74.05
PGSC0003DMT400049479	Potato	cytosol	72.9	72.31
Solyc07g064090.2.1	Tomato	nucleus	72.9	72.31
KRH31935	Soybean	cytosol	73.71	71.2
GSMUA_Achr5P26370_001	Banana	cytosol	71.0	71.2
KRH71526	Soybean	cytosol	73.17	70.87
Os08t0137100-01	Rice	cytosol	68.83	67.55
KRH27099	Soybean	cytosol, mitochondrion, nucleus	40.92	67.11
Zm00001d024698_P002	Maize	cytosol	68.83	67.02
KRH22237	Soybean	cytosol	69.92	67.01
TraesCS7A01G089100.1	Wheat	cytosol	60.7	59.1
TraesCS4A01G388400.1	Wheat	cytosol, plastid	60.16	58.73
TraesCS7A01G308300.1	Wheat	nucleus, plastid	67.48	52.64
HORVU7Hr1G073410.1	Barley	cytosol	66.67	51.68
OQU79846	Sorghum	plastid	68.83	51.63
TraesCS7D01G305100.1	Wheat	nucleus, plastid	67.48	51.34
Os08t0137250-01	Rice	cytosol	62.06	49.14
TraesCS7D01G084500.1	Wheat	plastid	60.16	48.79
TraesCS7A01G089200.1	Wheat	cytoskeleton, cytosol, nucleus, plastid	60.16	48.79
EES13318	Sorghum	mitochondrion	56.64	46.55
Zm00001d049608_P001	Maize	mitochondrion	56.1	44.9

Protein Annotations

MapMan:12.3.3.1.1.2	Gene3D:2.130.10.10	EntrezGene:821622	UniProt:A0A178VF76	ProteinID:AEE76418.1	EMBL:AF129516
EMBL:AK117114	ArrayExpress:AT3G20740	EnsemblPlantsGene:AT3G20740	RefSeq:AT3G20740	TAIR:AT3G20740	RefSeq:AT3G20740-TAIR-G
EnsemblPlants:AT3G20740.1	TAIR:AT3G20740.1	Unigene:At.74826	ProteinID:BAB02481.1	EMBL:BT005326	Symbol:FIE
InterPro:G-protein_beta_WD-40_rep	GO:GO:0000003	GO:GO:0003674	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005654	GO:GO:0005677
GO:GO:0006139	GO:GO:0006325	GO:GO:0006349	GO:GO:0006351	GO:GO:0006355	GO:GO:0006464
GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009409
GO:GO:0009628	GO:GO:0009791	GO:GO:0009987	GO:GO:0016043	GO:GO:0016571	GO:GO:0019538
GO:GO:0035098	GO:GO:0040029	GO:GO:0043078	GO:GO:2000014	InterPro:IPR001680	InterPro:IPR015943
InterPro:IPR017986	RefSeq:NP_188710.1	ProteinID:OAP04929.1	PFAM:PF00400	PO:PO:0000013	PO:PO:0000037
PO:PO:0000198	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020003
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR10253	PANTHER:PTHR10253:SF5
InterPro:Polycomb_EED	UniProt:Q9LT47	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI00000041E7	InterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	:	:

Description

FIEPolycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM [Source:UniProtKB/Swiss-Prot;Acc:Q9LT47]

Coordinates

chr3:-:7248809..7252452

Molecular Weight (calculated)

41259.2 Da

IEP (calculated)

6.169

GRAVY (calculated)

-0.076

Length

369 amino acids

Sequence
(BLAST)

001: MSKITLGNES IVGSLTPSNK KSYKVTNRIQ EGKKPLYAVV FNFLDARFFD VFVTAGGNRI TLYNCLGDGA ISALQSYADE DKEESFYTVS WACGVNGNPY
101: VAAGGVKGII RVIDVNSETI HKSLVGHGDS VNEIRTQPLK PQLVITASKD ESVRLWNVET GICILIFAGA GGHRYEVLSV DFHPSDIYRF ASCGMDTTIK
201: IWSMKEFWTY VEKSFTWTDD PSKFPTKFVQ FPVFTASIHT NYVDCNRWFG DFILSKSVDN EILLWEPQLK ENSPGEGASD VLLRYPVPMC DIWFIKFSCD
301: LHLSSVAIGN QEGKVYVWDL KSCPPVLITK LSHNQSKSVI RQTAMSVDGS TILACCEDGT IWRWDVITK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.