Factsheet for AT3G60100.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 9
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014513.1-P	Field mustard	mitochondrion	90.83	90.25
CDX89047	Canola	mitochondrion	90.83	90.25
CDY42662	Canola	mitochondrion	90.83	90.25
AT2G44350.2	Thale cress	mitochondrion	85.93	85.02
PGSC0003DMT400074559	Potato	mitochondrion	84.01	83.83
VIT_13s0156g00180.t01	Wine grape	mitochondrion	83.58	83.05
Solyc01g073740.2.1	Tomato	plastid	81.24	80.38
KXG29695	Sorghum	mitochondrion	79.53	79.03
Os02t0194100-01	Rice	mitochondrion	78.46	77.97
Zm00001d053685_P002	Maize	mitochondrion	78.46	77.97
TraesCS6A01G167300.1	Wheat	mitochondrion	78.04	77.54
TraesCS6B01G194700.1	Wheat	mitochondrion	78.04	77.54
Os11t0538900-01	Rice	mitochondrion	78.25	74.29
TraesCS6D01G155800.1	Wheat	mitochondrion	77.83	73.15
GSMUA_Achr4P19260_001	Banana	mitochondrion	75.91	72.8
Zm00001d053684_P005	Maize	mitochondrion	73.99	71.69
HORVU6Hr1G033980.6	Barley	plastid	73.99	71.25
Zm00001d015856_P007	Maize	mitochondrion	71.86	69.06
AT2G42790.1	Thale cress	cytosol	24.73	22.79
AT3G58750.1	Thale cress	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	23.67	21.6
AT2G11270.1	Thale cress	mitochondrion	3.62	20.48
AT3G58740.1	Thale cress	cytosol	20.47	20.0

Protein Annotations

Gene3D:1.10.230.10	Gene3D:1.10.580.10	MapMan:2.3.1	EntrezGene:825180	UniProt:A0A1I9LSJ6	ProteinID:ANM65554.1
ArrayExpress:AT3G60100	EnsemblPlantsGene:AT3G60100	RefSeq:AT3G60100	TAIR:AT3G60100	RefSeq:AT3G60100-TAIR-G	EnsemblPlants:AT3G60100.2
Unigene:At.70776	Symbol:CSY5	InterPro:Citrate_synth-like_lrg_a-sub	InterPro:Citrate_synth-like_sm_a-sub	InterPro:Citrate_synthase	InterPro:Citrate_synthase_AS
InterPro:Citrate_synthase_euk	InterPro:Citrate_synthase_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004108
GO:GO:0006091	GO:GO:0006099	GO:GO:0006101	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016740	GO:GO:0046912	InterPro:IPR016142	InterPro:IPR016143	RefSeq:NP_001327513.1	PFAM:PF00285
PRINTS:PR00143	ScanProsite:PS00480	PANTHER:PTHR11739	PANTHER:PTHR11739:SF8	SUPFAM:SSF48256	TIGRFAMs:TIGR01793
UniParc:UPI0008493D85	SEG:seg	:	:	:	:

Description

CSY5Citrate synthase [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSJ6]

Coordinates

chr3:+:22192730..22196447

Molecular Weight (calculated)

52410.1 Da

IEP (calculated)

6.653

GRAVY (calculated)

-0.177

Length

469 amino acids

Sequence
(BLAST)

001: MVFFRSVSAI SRLRSRAVQQ SSLSNSVRWL HSSELDLKSQ MQEIIPEQQD RLKKLKSEQG KVPVGNITVD MVLGGMRGMT GLLWETSLLD ADEGIRFRGM
101: SIPECQKILP SAESGEEPLP ESLLWLLLTG KVPTKEQANA LSTELAHRAA VPDYIYKAID ALPSTAHPMT QFASGVMALQ VQSEFQKAYE QGDISKSKYW
201: EPTFEDALNL IARVPVVASY VYRRMYKDGS IIPLDDSLDY GANFSHMLGF DSPQMKELMR LYVTIHSDHE GGNVSAHAGH LVGSALSDPY LSFAAALNGL
301: AGPLHGLANQ EVLLWIKLVV EECGESISKE QLKDYVWKTL NSGKVVPGYG HGVLRKTDPR YICQREFALK HLPDDPLFQL VSKLYEVVPP ILTELGKVKN
401: PWPNVDAHSG VLLNYYGLTE ARYYTVLFGV SRSLGICSQL IWDRALGLPL ERPKSVNMDW LDNFTRLNR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.