Factsheet for Zm00001d015856_P007

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG29695	Sorghum	mitochondrion	86.07	88.98
Zm00001d053685_P002	Maize	mitochondrion	85.25	88.14
Os02t0194100-01	Rice	mitochondrion	82.17	84.96
TraesCS6B01G194700.1	Wheat	mitochondrion	80.12	82.84
TraesCS6A01G167300.1	Wheat	mitochondrion	79.92	82.63
Os11t0538900-01	Rice	mitochondrion	82.58	81.58
Zm00001d053684_P005	Maize	mitochondrion	80.33	80.99
TraesCS6D01G155800.1	Wheat	mitochondrion	80.33	78.56
Bra000351.1-P	Field mustard	cytosol	69.67	76.58
VIT_13s0156g00180.t01	Wine grape	mitochondrion	73.98	76.48
CDX95601	Canola	mitochondrion	73.16	75.16
CDX83429	Canola	mitochondrion	72.95	74.95
CDY30465	Canola	mitochondrion	72.75	74.74
Bra037657.1-P	Field mustard	mitochondrion	72.75	74.74
CDY23428	Canola	mitochondrion	72.54	74.53
AT2G44350.2	Thale cress	mitochondrion	72.34	74.47
PGSC0003DMT400074559	Potato	mitochondrion	71.72	74.47
HORVU6Hr1G033980.6	Barley	plastid	73.77	73.92
Bra014513.1-P	Field mustard	mitochondrion	70.9	73.31
CDX89047	Canola	mitochondrion	70.9	73.31
CDY42662	Canola	mitochondrion	70.7	73.09
AT3G60100.2	Thale cress	mitochondrion	69.06	71.86
Solyc01g073740.2.1	Tomato	plastid	69.47	71.52
GSMUA_Achr4P19260_001	Banana	mitochondrion	67.83	67.69
KRH13859	Soybean	mitochondrion	62.7	64.83
KRH43565	Soybean	mitochondrion	62.5	64.62
Zm00001d016248_P001	Maize	mitochondrion	19.88	19.28

Protein Annotations

Gene3D:1.10.230.10	Gene3D:1.10.580.10	EntrezGene:100279573	MapMan:2.3.1	UniProt:A0A1D6H4C4	ProteinID:AQK69685.1
InterPro:Citrate_synth-like_lrg_a-sub	InterPro:Citrate_synth-like_sm_a-sub	InterPro:Citrate_synthase	InterPro:Citrate_synthase_AS	InterPro:Citrate_synthase_sf	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0046912
InterPro:IPR016142	InterPro:IPR016143	PFAM:PF00285	PRINTS:PR00143	ScanProsite:PS00480	PANTHER:PTHR11739
PANTHER:PTHR11739:SF8	SUPFAM:SSF48256	TMHMM:TMhelix	UniParc:UPI0008426353	EnsemblPlantsGene:Zm00001d015856	EnsemblPlants:Zm00001d015856_P007
EnsemblPlants:Zm00001d015856_T007	SEG:seg	:	:	:	:

Description

citrate synthase1 citrate synthase1

Coordinates

chr5:+:126813464..126819393

Molecular Weight (calculated)

54410.2 Da

IEP (calculated)

8.596

GRAVY (calculated)

-0.053

Length

488 amino acids

Sequence
(BLAST)

001: MAFYRGLTAV SRLRSRMAQE ATTLGGVRWL QMQSASDLDL KSQLQELIPE QQDRLKKLKS EHGKTQLGNI TVDMVLGGMR GMTGMLWETS LLDPEEGIRF
101: RGLSIPECQK VLPTAVKGGE PLPEGLLWLL LTGKVYAFLY SFNLNLKMCQ MCSVKNTFLA YLCISIPLIY FSFFPNSHPI SISFKAVFFF LFQVPTKEQV
201: DALSKELLAR STVPAHVYKT IDALPVDAHP MTQFTTGVMA LQVESEFQKA YDNGLPKSKF WEPTYEDCLN LIARLPPVAS YVYRSDHEGG NVSAHTGHLV
301: GSALSDPYLS FAAALNGLAG PLHGLANQEV LLWIKSVIEE TGSGVTTDQL KDYVWKTLKS GKVVPGFGHG VLRKTDPRYS CQREFALKHL PKDPLFQLVS
401: KLYEVVPPIL TELGKVKNPW PNVDAHSGVL LNHFGLSEAR YYTVLFGVSR SMGIGSQLIW DRALGLPLER PKSVTMEWLE NYCKNKAA

Best Arabidopsis Sequence Match ( AT2G44350.1 )
(BLAST)

001: MVFFRSVSAF TRLRSRVGQQ SSLSNSVRWI QMQSSTDLDL KSQLQELIPE QQDRLKKLKS EHGKVQLGNI TVDMVIGGMR GMTGLLWETS LLDPEEGIRF
101: RGLSIPECQK VLPTAQSGAE PLPEGLLWLL LTGKVPSKEQ VEALSKDLAN RAAVPDYVYN AIDALPSTAH PMTQFASGVM ALQVQSEFQK AYENGIHKSK
201: FWEPTYEDCL NLIARVPVVA AYVYRRMYKN GDSIPSDKSL DYGANFSHML GFDDEKVKEL MRLYITIHSD HEGGNVSAHT GHLVGSALSD PYLSFAAALN
301: GLAGPLHGLA NQEVLLWIKS VVEECGEDIS KEQLKEYVWK TLNSGKVIPG YGHGVLRNTD PRYVCQREFA LKHLPDDPLF QLVSKLYEVV PPVLTELGKV
401: KNPWPNVDAH SGVLLNHYGL TEARYYTVLF GVSRSLGICS QLIWDRALGL ALERPKSVTM DWLEAHCKKA SSA

Arabidopsis Description

CSY4Citrate synthase 4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P20115]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.