Factsheet for Zm00001d053684_P005

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG29695	Sorghum	mitochondrion	89.88	92.16
Zm00001d053685_P002	Maize	mitochondrion	89.67	91.95
Os02t0194100-01	Rice	mitochondrion	85.95	88.14
Os11t0538900-01	Rice	mitochondrion	87.19	85.43
TraesCS6B01G194700.1	Wheat	mitochondrion	83.26	85.38
TraesCS6A01G167300.1	Wheat	mitochondrion	83.06	85.17
TraesCS6D01G155800.1	Wheat	mitochondrion	83.68	81.16
Zm00001d015856_P007	Maize	mitochondrion	80.99	80.33
VIT_13s0156g00180.t01	Wine grape	mitochondrion	76.45	78.39
Bra000351.1-P	Field mustard	cytosol	71.49	77.93
CDX95601	Canola	mitochondrion	75.21	76.63
CDX83429	Canola	mitochondrion	75.0	76.42
HORVU6Hr1G033980.6	Barley	plastid	76.86	76.39
AT2G44350.2	Thale cress	mitochondrion	74.59	76.16
CDY23428	Canola	mitochondrion	74.59	76.0
CDY30465	Canola	mitochondrion	74.59	76.0
Bra037657.1-P	Field mustard	mitochondrion	74.59	76.0
CDX89047	Canola	mitochondrion	73.35	75.21
Bra014513.1-P	Field mustard	mitochondrion	73.35	75.21
CDY42662	Canola	mitochondrion	73.14	75.0
PGSC0003DMT400074559	Potato	mitochondrion	72.73	74.89
AT3G60100.2	Thale cress	mitochondrion	71.69	73.99
GSMUA_Achr4P19260_001	Banana	mitochondrion	72.31	71.57
Solyc01g073740.2.1	Tomato	plastid	70.04	71.52
KRH13859	Soybean	mitochondrion	67.15	68.86
KRH43565	Soybean	mitochondrion	66.94	68.64
Zm00001d016248_P001	Maize	mitochondrion	22.52	21.67

Protein Annotations

Gene3D:1.10.230.10	Gene3D:1.10.580.10	MapMan:2.3.1	UniProt:A0A1D6QRH8	ProteinID:AQK60111.1	ProteinID:AQK60116.1
InterPro:Citrate_synth-like_lrg_a-sub	InterPro:Citrate_synth-like_sm_a-sub	InterPro:Citrate_synthase	InterPro:Citrate_synthase_AS	InterPro:Citrate_synthase_euk	InterPro:Citrate_synthase_sf
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004108	GO:GO:0006091	GO:GO:0006099
GO:GO:0006101	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0046912
InterPro:IPR016142	InterPro:IPR016143	PFAM:PF00285	PRINTS:PR00143	ScanProsite:PS00480	PANTHER:PTHR11739
PANTHER:PTHR11739:SF8	SUPFAM:SSF48256	TIGRFAMs:TIGR01793	UniParc:UPI0008442B1C	EnsemblPlantsGene:Zm00001d053684	EnsemblPlants:Zm00001d053684_P005
EnsemblPlants:Zm00001d053684_T005	SEG:seg	:	:	:	:

Description

Putative citrate synthase family protein

Coordinates

chr4:+:238977919..238988994

Molecular Weight (calculated)

53842.5 Da

IEP (calculated)

7.474

GRAVY (calculated)

-0.100

Length

484 amino acids

Sequence
(BLAST)

001: MAFFRGLTAV SRLRSRMAQE ATTLGGVRWL QMQSASDLVG QLVFLLLYIA DLKSQLRELI PEQQDRLKKL KSEHGKVQLG NITVDMVLGG MRGIIGMLWE
101: TSLVDPEEGI RFRGLSIPEC RKVLPTAVEG GEPLPEGLLW LLLTGKVPTK DQVDALSKEL LARSTVPAHV YKVIDALPVT AHPMTQFTAG IMALQVESEF
201: QKAYGNGLPK SKLWEPTYED CLNLIARLPP VASYVYRRIF KDGKSIEADD SLDYAANLSH MLGFDDPRML ELMRLHVTIH ADHEGGNISS HTGHLVGSAL
301: SDPYLSFASS VNGLAGPLHG LANQEALLWL KSIIQETGSD VTTDQLKDYV WKTLKSGKVV HGFGHGVLRR TDPRYLCQRE FALKYLPEDP LFQLLSKLYE
401: VVPPILTELG KVKNPWPNVD AHSGLLLNHF GLSETRYHTV LFGVSRSMGV GSQLIWDRAL GLPLERPKSV TMEWLENYCK NKAA

Best Arabidopsis Sequence Match ( AT2G44350.1 )
(BLAST)

001: MVFFRSVSAF TRLRSRVGQQ SSLSNSVRWI QMQSSTDLDL KSQLQELIPE QQDRLKKLKS EHGKVQLGNI TVDMVIGGMR GMTGLLWETS LLDPEEGIRF
101: RGLSIPECQK VLPTAQSGAE PLPEGLLWLL LTGKVPSKEQ VEALSKDLAN RAAVPDYVYN AIDALPSTAH PMTQFASGVM ALQVQSEFQK AYENGIHKSK
201: FWEPTYEDCL NLIARVPVVA AYVYRRMYKN GDSIPSDKSL DYGANFSHML GFDDEKVKEL MRLYITIHSD HEGGNVSAHT GHLVGSALSD PYLSFAAALN
301: GLAGPLHGLA NQEVLLWIKS VVEECGEDIS KEQLKEYVWK TLNSGKVIPG YGHGVLRNTD PRYVCQREFA LKHLPDDPLF QLVSKLYEVV PPVLTELGKV
401: KNPWPNVDAH SGVLLNHYGL TEARYYTVLF GVSRSLGICS QLIWDRALGL ALERPKSVTM DWLEAHCKKA SSA

Arabidopsis Description

CSY4Citrate synthase 4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P20115]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.