Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 9
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX95601 | Canola | mitochondrion | 96.41 | 96.21 |
| CDX83429 | Canola | mitochondrion | 96.2 | 96.0 |
| CDY23428 | Canola | mitochondrion | 95.99 | 95.79 |
| Bra037657.1-P | Field mustard | mitochondrion | 95.57 | 95.37 |
| CDY30465 | Canola | mitochondrion | 95.57 | 95.37 |
| Bra000351.1-P | Field mustard | cytosol | 89.03 | 95.05 |
| AT3G60100.2 | Thale cress | mitochondrion | 85.02 | 85.93 |
| PGSC0003DMT400074559 | Potato | mitochondrion | 84.6 | 85.32 |
| VIT_13s0156g00180.t01 | Wine grape | mitochondrion | 83.76 | 84.11 |
| Solyc01g073740.2.1 | Tomato | plastid | 82.28 | 82.28 |
| Os02t0194100-01 | Rice | mitochondrion | 81.86 | 82.2 |
| KXG29695 | Sorghum | mitochondrion | 81.86 | 82.2 |
| Zm00001d053685_P002 | Maize | mitochondrion | 81.43 | 81.78 |
| TraesCS6B01G194700.1 | Wheat | mitochondrion | 80.8 | 81.14 |
| TraesCS6A01G167300.1 | Wheat | mitochondrion | 80.59 | 80.93 |
| Os11t0538900-01 | Rice | mitochondrion | 81.43 | 78.14 |
| TraesCS6D01G155800.1 | Wheat | mitochondrion | 81.22 | 77.15 |
| Zm00001d053684_P005 | Maize | mitochondrion | 76.16 | 74.59 |
| HORVU6Hr1G033980.6 | Barley | plastid | 75.74 | 73.72 |
| GSMUA_Achr4P19260_001 | Banana | mitochondrion | 75.95 | 73.62 |
| Zm00001d015856_P007 | Maize | mitochondrion | 74.47 | 72.34 |
| AT2G42790.1 | Thale cress | cytosol | 24.26 | 22.59 |
| AT2G11270.1 | Thale cress | mitochondrion | 3.8 | 21.69 |
| AT3G58750.1 | Thale cress | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 23.0 | 21.21 |
| AT3G58740.1 | Thale cress | cytosol | 20.46 | 20.21 |
Protein Annotations
| Gene3D:1.10.230.10 | Gene3D:1.10.580.10 | MapMan:2.3.1 | EntrezGene:819042 | ProteinID:AAC16084.2 | ProteinID:AEC10410.1 |
| ProteinID:AEC10411.1 | EMBL:AF387018 | ProteinID:ANM62353.1 | ProteinID:ANM62354.1 | ArrayExpress:AT2G44350 | EnsemblPlantsGene:AT2G44350 |
| RefSeq:AT2G44350 | TAIR:AT2G44350 | RefSeq:AT2G44350-TAIR-G | EnsemblPlants:AT2G44350.2 | TAIR:AT2G44350.2 | Symbol:ATCS |
| EMBL:AY085647 | Unigene:At.34501 | EMBL:BT006613 | InterPro:Citrate_synth-like_lrg_a-sub | InterPro:Citrate_synth-like_sm_a-sub | InterPro:Citrate_synthase |
| InterPro:Citrate_synthase_AS | InterPro:Citrate_synthase_euk | InterPro:Citrate_synthase_sf | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004108 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005618 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005759 | GO:GO:0006091 |
| GO:GO:0006099 | GO:GO:0006101 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0030312 | GO:GO:0046686 | GO:GO:0046912 |
| InterPro:IPR016142 | InterPro:IPR016143 | RefSeq:NP_001324514.1 | RefSeq:NP_001324515.1 | RefSeq:NP_566016.1 | RefSeq:NP_850415.1 |
| UniProt:P20115 | PFAM:PF00285 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PRINTS:PR00143 | ScanProsite:PS00480 | PANTHER:PTHR11739 | PANTHER:PTHR11739:SF8 | SUPFAM:SSF48256 |
| TIGRFAMs:TIGR01793 | UniParc:UPI000017600F | EMBL:X17528 | SEG:seg | : | : |
Description
CSY4Citrate synthase 4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P20115]
Coordinates
chr2:+:18316278..18320789
Molecular Weight (calculated)
52785.4 Da
IEP (calculated)
6.883
GRAVY (calculated)
-0.211
Length
474 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFFRSVSAF TRLRSRVQGQ QSSLSNSVRW IQMQSSTDLD LKSQLQELIP EQQDRLKKLK SEHGKVQLGN ITVDMVIGGM RGMTGLLWET SLLDPEEGIR
101: FRGLSIPECQ KVLPTAQSGA EPLPEGLLWL LLTGKVPSKE QVEALSKDLA NRAAVPDYVY NAIDALPSTA HPMTQFASGV MALQVQSEFQ KAYENGIHKS
201: KFWEPTYEDC LNLIARVPVV AAYVYRRMYK NGDSIPSDKS LDYGANFSHM LGFDDEKVKE LMRLYITIHS DHEGGNVSAH TGHLVGSALS DPYLSFAAAL
301: NGLAGPLHGL ANQEVLLWIK SVVEECGEDI SKEQLKEYVW KTLNSGKVIP GYGHGVLRNT DPRYVCQREF ALKHLPDDPL FQLVSKLYEV VPPVLTELGK
401: VKNPWPNVDA HSGVLLNHYG LTEARYYTVL FGVSRSLGIC SQLIWDRALG LALERPKSVT MDWLEAHCKK ASSA
101: FRGLSIPECQ KVLPTAQSGA EPLPEGLLWL LLTGKVPSKE QVEALSKDLA NRAAVPDYVY NAIDALPSTA HPMTQFASGV MALQVQSEFQ KAYENGIHKS
201: KFWEPTYEDC LNLIARVPVV AAYVYRRMYK NGDSIPSDKS LDYGANFSHM LGFDDEKVKE LMRLYITIHS DHEGGNVSAH TGHLVGSALS DPYLSFAAAL
301: NGLAGPLHGL ANQEVLLWIK SVVEECGEDI SKEQLKEYVW KTLNSGKVIP GYGHGVLRNT DPRYVCQREF ALKHLPDDPL FQLVSKLYEV VPPVLTELGK
401: VKNPWPNVDA HSGVLLNHYG LTEARYYTVL FGVSRSLGIC SQLIWDRALG LALERPKSVT MDWLEAHCKK ASSA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.