Factsheet for Bra037657.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 9
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30465	Canola	mitochondrion	100.0	100.0
Bra000351.1-P	Field mustard	cytosol	90.32	96.62
AT2G44350.2	Thale cress	mitochondrion	95.37	95.57
Bra014513.1-P	Field mustard	mitochondrion	86.53	87.08
PGSC0003DMT400074559	Potato	mitochondrion	85.05	85.96
VIT_13s0156g00180.t01	Wine grape	mitochondrion	83.58	84.11
Solyc01g073740.2.1	Tomato	plastid	82.53	82.7
KXG29695	Sorghum	mitochondrion	81.89	82.42
Os02t0194100-01	Rice	mitochondrion	81.68	82.2
Zm00001d053685_P002	Maize	mitochondrion	81.47	81.99
TraesCS6B01G194700.1	Wheat	mitochondrion	80.84	81.36
TraesCS6A01G167300.1	Wheat	mitochondrion	80.63	81.14
Os11t0538900-01	Rice	mitochondrion	81.26	78.14
TraesCS6D01G155800.1	Wheat	mitochondrion	81.26	77.35
Zm00001d053684_P005	Maize	mitochondrion	76.0	74.59
HORVU6Hr1G033980.6	Barley	plastid	76.0	74.13
GSMUA_Achr4P19260_001	Banana	mitochondrion	76.21	74.03
KRH43565	Soybean	mitochondrion	72.63	73.09
KRH13859	Soybean	mitochondrion	72.42	72.88
Zm00001d015856_P007	Maize	mitochondrion	74.74	72.75
Bra003355.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	23.79	22.24
Bra004720.1-P	Field mustard	cytosol	23.79	22.16
Bra014554.1-P	Field mustard	cytosol	21.68	21.91
Bra007417.1-P	Field mustard	cytosol	23.37	21.89
Bra007416.1-P	Field mustard	cytosol	20.42	21.6

Protein Annotations

Gene3D:1.10.230.10	Gene3D:1.10.580.10	MapMan:2.3.1	EnsemblPlantsGene:Bra037657	EnsemblPlants:Bra037657.1	EnsemblPlants:Bra037657.1-P
InterPro:Citrate_synth-like_lrg_a-sub	InterPro:Citrate_synth-like_sm_a-sub	InterPro:Citrate_synthase	InterPro:Citrate_synthase_AS	InterPro:Citrate_synthase_euk	InterPro:Citrate_synthase_sf
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004108	GO:GO:0006091	GO:GO:0006099
GO:GO:0006101	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0046912
InterPro:IPR016142	InterPro:IPR016143	UniProt:M4F994	PFAM:PF00285	PRINTS:PR00143	ScanProsite:PS00480
PANTHER:PTHR11739	PANTHER:PTHR11739:SF8	SUPFAM:SSF48256	TIGRFAMs:TIGR01793	UniParc:UPI000254406D	SEG:seg

Description

AT2G44350 (E=3e-249) ATCS, CSY4 | ATCS; ATP binding / ATP citrate synthase/ citrate (SI)-synthase

Coordinates

chrA04:+:18294690..18298633

Molecular Weight (calculated)

52764.6 Da

IEP (calculated)

7.636

GRAVY (calculated)

-0.198

Length

475 amino acids

Sequence
(BLAST)

001: MVFFRSVTAL ARLRSRVGQQ SSLSNSVRWI QMQSSTDMDL KSQLQELIPE QQDRLKKLKS EHGKVQLGNI TVDMVIGGMR GMTGLLWETS LLDPEEGIRF
101: RGLSIPECQK VLPAAQSGGE PLPEGLLWLL LTGKVPSKEQ VKALSQDLAN RAAVPDYVYN AIDALPSTAH PMTQFASGVM ALQVQSEFQK AYENGIHKSK
201: FWEPTYEDCL NLIARVPVVA AYVYRRMYKN GDSVPSDKSL DYGANFSHML GFDDDKMKEL MRLYITIHSD HEGGNVSAHT GHLVGSALSD PYLSFAAALN
301: GLAGPLHGLA NQEVLLWIKS VVEECGENIS KDQLKEYVWK TLNSGKVVPG YGHGVLRKTD PRYVCQREFA LKHLPDDPLF QLVSKLYEVV PPVLTELGKV
401: KNPWPNVDAH SGVLLNHYGL TEARYYTVLF GVSRSLGICS QLIWDRALGL ALERPKSVTM DWLDAFCKKA KASSA

Best Arabidopsis Sequence Match ( AT2G44350.1 )
(BLAST)

001: MVFFRSVSAF TRLRSRVGQQ SSLSNSVRWI QMQSSTDLDL KSQLQELIPE QQDRLKKLKS EHGKVQLGNI TVDMVIGGMR GMTGLLWETS LLDPEEGIRF
101: RGLSIPECQK VLPTAQSGAE PLPEGLLWLL LTGKVPSKEQ VEALSKDLAN RAAVPDYVYN AIDALPSTAH PMTQFASGVM ALQVQSEFQK AYENGIHKSK
201: FWEPTYEDCL NLIARVPVVA AYVYRRMYKN GDSIPSDKSL DYGANFSHML GFDDEKVKEL MRLYITIHSD HEGGNVSAHT GHLVGSALSD PYLSFAAALN
301: GLAGPLHGLA NQEVLLWIKS VVEECGEDIS KEQLKEYVWK TLNSGKVIPG YGHGVLRNTD PRYVCQREFA LKHLPDDPLF QLVSKLYEVV PPVLTELGKV
401: KNPWPNVDAH SGVLLNHYGL TEARYYTVLF GVSRSLGICS QLIWDRALGL ALERPKSVTM DWLEAHCKKA SSA

Arabidopsis Description

CSY4Citrate synthase 4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P20115]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.