Factsheet for TraesCS6D01G155800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G167300.1	Wheat	mitochondrion	92.99	98.31
TraesCS6B01G194700.1	Wheat	mitochondrion	92.99	98.31
Os02t0194100-01	Rice	mitochondrion	88.18	93.22
KXG29695	Sorghum	mitochondrion	86.97	91.95
Zm00001d053685_P002	Maize	mitochondrion	86.37	91.31
Os11t0538900-01	Rice	mitochondrion	87.58	88.46
HORVU6Hr1G033980.6	Barley	plastid	85.77	87.89
Zm00001d053684_P005	Maize	mitochondrion	81.16	83.68
Bra000351.1-P	Field mustard	cytosol	73.75	82.88
CDX95601	Canola	mitochondrion	78.16	82.11
VIT_13s0156g00180.t01	Wine grape	mitochondrion	77.35	81.78
CDX83429	Canola	mitochondrion	77.76	81.68
CDY23428	Canola	mitochondrion	77.35	81.26
CDY30465	Canola	mitochondrion	77.35	81.26
Bra037657.1-P	Field mustard	mitochondrion	77.35	81.26
AT2G44350.2	Thale cress	mitochondrion	77.15	81.22
Zm00001d015856_P007	Maize	mitochondrion	78.56	80.33
Bra014513.1-P	Field mustard	mitochondrion	75.15	79.45
CDY42662	Canola	mitochondrion	75.15	79.45
CDX89047	Canola	mitochondrion	75.15	79.45
PGSC0003DMT400074559	Potato	mitochondrion	74.75	79.36
AT3G60100.2	Thale cress	mitochondrion	73.15	77.83
Solyc01g073740.2.1	Tomato	plastid	71.94	75.74
GSMUA_Achr4P19260_001	Banana	mitochondrion	74.15	75.66
KRH13859	Soybean	mitochondrion	67.74	71.61
KRH43565	Soybean	mitochondrion	67.54	71.4
TraesCS5D01G422000.1	Wheat	unclear	21.04	20.87

Protein Annotations

Gene3D:1.10.230.10	Gene3D:1.10.580.10	MapMan:2.3.1	InterPro:Citrate_synth-like_lrg_a-sub	InterPro:Citrate_synth-like_sm_a-sub	InterPro:Citrate_synthase
InterPro:Citrate_synthase_AS	InterPro:Citrate_synthase_euk	InterPro:Citrate_synthase_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0004108	GO:GO:0006091	GO:GO:0006099	GO:GO:0006101	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016740	GO:GO:0046912	InterPro:IPR016142	InterPro:IPR016143	PFAM:PF00285
PRINTS:PR00143	ScanProsite:PS00480	PANTHER:PTHR11739	PANTHER:PTHR11739:SF8	SUPFAM:SSF48256	TIGRFAMs:TIGR01793
EnsemblPlantsGene:TraesCS6D01G155800	EnsemblPlants:TraesCS6D01G155800.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6D:+:131941954..131948685

Molecular Weight (calculated)

55483.3 Da

IEP (calculated)

7.142

GRAVY (calculated)

-0.146

Length

499 amino acids

Sequence
(BLAST)

001: MAFFRGLAAV SRLRSRMGQD ATTLGGVRWL QMQSASDLDL RSQLQEMIPE QQDRLKKLKS EHGKVQLGNI TVDMVLGGMR GMTGMLWETS LLDPEEGIRF
101: RGLSIPECQK VLPAAVKDGE PLPEGLLWLL LTGKVPTKEQ VDALSKELLS RSTVPGYVYK AIDALPVTAH PMTQFTTGVM ALQVDSEFQK AYNKGMPKTK
201: FWEPTYEDCL NLISRLPQVA SYVYRRIFKD GKAIAADNTL DYAANFSHML GFDDPKMLEL MRLYITIHTD HEGGNVSAHT GHLVGSALSD PYLSFAAALN
301: GLAGPLHGLA NQEVLLWIKS VMEETGSNIT TDQLKEYVWK TLKSGKVVPG YGHGVLRNTD PRYSCQREFA LKYLPEDPLF QLVSKLYEVV PPILTELGKV
401: KNPWPNVDAH SGVLLNHFGL TEARYYTVLF GVSRSIGIGS QVCPPLQFPD ASLFGFPSGN LDQLFVTQLI WDRALGLPLE RPKSVTMEWL ENHCKKVAA

Best Arabidopsis Sequence Match ( AT2G44350.1 )
(BLAST)

001: MVFFRSVSAF TRLRSRVGQQ SSLSNSVRWI QMQSSTDLDL KSQLQELIPE QQDRLKKLKS EHGKVQLGNI TVDMVIGGMR GMTGLLWETS LLDPEEGIRF
101: RGLSIPECQK VLPTAQSGAE PLPEGLLWLL LTGKVPSKEQ VEALSKDLAN RAAVPDYVYN AIDALPSTAH PMTQFASGVM ALQVQSEFQK AYENGIHKSK
201: FWEPTYEDCL NLIARVPVVA AYVYRRMYKN GDSIPSDKSL DYGANFSHML GFDDEKVKEL MRLYITIHSD HEGGNVSAHT GHLVGSALSD PYLSFAAALN
301: GLAGPLHGLA NQEVLLWIKS VVEECGEDIS KEQLKEYVWK TLNSGKVIPG YGHGVLRNTD PRYVCQREFA LKHLPDDPLF QLVSKLYEVV PPVLTELGKV
401: KNPWPNVDAH SGVLLNHYGL TEARYYTVLF GVSRSLGICS QLIWDRALGL ALERPKSVTM DWLEAHCKKA SSA

Arabidopsis Description

CSY4Citrate synthase 4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P20115]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.