Factsheet for Zm00001d053685_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG29695	Sorghum	mitochondrion	98.52	98.52
Os02t0194100-01	Rice	mitochondrion	94.28	94.28
TraesCS6B01G194700.1	Wheat	mitochondrion	91.1	91.1
Os11t0538900-01	Rice	mitochondrion	95.13	90.89
TraesCS6A01G167300.1	Wheat	mitochondrion	90.89	90.89
Zm00001d053684_P005	Maize	mitochondrion	91.95	89.67
TraesCS6D01G155800.1	Wheat	mitochondrion	91.31	86.37
Zm00001d015856_P007	Maize	mitochondrion	88.14	85.25
Bra000351.1-P	Field mustard	cytosol	79.03	84.01
VIT_13s0156g00180.t01	Wine grape	mitochondrion	82.63	82.63
HORVU6Hr1G033980.6	Barley	plastid	84.75	82.14
CDX95601	Canola	mitochondrion	82.63	82.11
CDX83429	Canola	mitochondrion	82.63	82.11
CDY30465	Canola	mitochondrion	81.99	81.47
Bra037657.1-P	Field mustard	mitochondrion	81.99	81.47
AT2G44350.2	Thale cress	mitochondrion	81.78	81.43
CDY23428	Canola	mitochondrion	81.78	81.26
CDX89047	Canola	mitochondrion	79.87	79.87
Bra014513.1-P	Field mustard	mitochondrion	79.87	79.87
CDY42662	Canola	mitochondrion	79.66	79.66
PGSC0003DMT400074559	Potato	mitochondrion	79.24	79.57
AT3G60100.2	Thale cress	mitochondrion	77.97	78.46
Solyc01g073740.2.1	Tomato	plastid	76.48	76.16
GSMUA_Achr4P19260_001	Banana	mitochondrion	77.75	75.05
KRH13859	Soybean	mitochondrion	70.76	70.76
KRH43565	Soybean	mitochondrion	70.55	70.55
Zm00001d016248_P001	Maize	mitochondrion	22.46	21.07

Protein Annotations

Gene3D:1.10.230.10	Gene3D:1.10.580.10	EntrezGene:100194338	MapMan:2.3.1	ProteinID:AQK60117.1	ProteinID:AQK60118.1
ProteinID:AQK60119.1	ProteinID:AQK60120.1	ProteinID:AQK60122.1	ProteinID:AQK60124.1	ProteinID:AQK60126.1	ProteinID:AQK60127.1
UniProt:B4FIC0	EMBL:BT036858	EMBL:BT066187	InterPro:Citrate_synth-like_lrg_a-sub	InterPro:Citrate_synth-like_sm_a-sub	InterPro:Citrate_synthase
InterPro:Citrate_synthase_AS	InterPro:Citrate_synthase_euk	InterPro:Citrate_synthase_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0004108	GO:GO:0006091	GO:GO:0006099	GO:GO:0006101	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016740	GO:GO:0046912	InterPro:IPR016142	InterPro:IPR016143	PFAM:PF00285
PRINTS:PR00143	ScanProsite:PS00480	PANTHER:PTHR11739	PANTHER:PTHR11739:SF8	SUPFAM:SSF48256	TIGRFAMs:TIGR01793
UniParc:UPI00017B71CF	EnsemblPlantsGene:Zm00001d053685	EnsemblPlants:Zm00001d053685_P002	EnsemblPlants:Zm00001d053685_T002	SEG:seg	:

Description

Citrate synthase

Coordinates

chr4:+:239005570..239012726

Molecular Weight (calculated)

52459.6 Da

IEP (calculated)

7.421

GRAVY (calculated)

-0.164

Length

472 amino acids

Sequence
(BLAST)

001: MAFFRGLTAV SRLRSRMAQE ATTLGGVRWL QMQSASDLDL KSQLQELIPE QQDRLKKLKS EHGKVQLGNI TVDMVLGGMR GMIGMLWETS LLDPEEGIRF
101: RGLSIPECQK VLPTAVKGGE PLPEGLLWLL LTGKVPTKEQ VDALSKELLA RSTVPAHVYK AIDALPVTAH PMTQFTTGVM ALQVESEFQK AYDNGLPKSK
201: FWEPTYEDCL NMIARLPPVA SYVYRRIFKG GKSIETDNSL DYAANFSHML GFDDPKMLEL MRLYVTIHTD HEGGNVSAHT GHLVGSALSD PYLSFAAALN
301: GLAGPLHGLA NQEVLLWIKS VIQETGSDVT TDQLKEYVWK TLKSGKVVPG FGHGVLRKTD PRYSCQREFA LKHLPEDPLF QLVSKLYEVV PPILTELGKV
401: KNPWPNVDAH SGVLLNHFGL SEARYYTVLF GVSRSMGIGS QLIWDRALGL PLERPKSVTM EWLENYCNNK AA

Best Arabidopsis Sequence Match ( AT2G44350.1 )
(BLAST)

001: MVFFRSVSAF TRLRSRVGQQ SSLSNSVRWI QMQSSTDLDL KSQLQELIPE QQDRLKKLKS EHGKVQLGNI TVDMVIGGMR GMTGLLWETS LLDPEEGIRF
101: RGLSIPECQK VLPTAQSGAE PLPEGLLWLL LTGKVPSKEQ VEALSKDLAN RAAVPDYVYN AIDALPSTAH PMTQFASGVM ALQVQSEFQK AYENGIHKSK
201: FWEPTYEDCL NLIARVPVVA AYVYRRMYKN GDSIPSDKSL DYGANFSHML GFDDEKVKEL MRLYITIHSD HEGGNVSAHT GHLVGSALSD PYLSFAAALN
301: GLAGPLHGLA NQEVLLWIKS VVEECGEDIS KEQLKEYVWK TLNSGKVIPG YGHGVLRNTD PRYVCQREFA LKHLPDDPLF QLVSKLYEVV PPVLTELGKV
401: KNPWPNVDAH SGVLLNHYGL TEARYYTVLF GVSRSLGICS QLIWDRALGL ALERPKSVTM DWLEAHCKKA SSA

Arabidopsis Description

CSY4Citrate synthase 4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P20115]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.