Factsheet for Bra014513.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 9
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89047	Canola	mitochondrion	100.0	100.0
AT3G60100.2	Thale cress	mitochondrion	90.25	90.83
Bra000351.1-P	Field mustard	cytosol	81.57	86.71
Bra037657.1-P	Field mustard	mitochondrion	87.08	86.53
PGSC0003DMT400074559	Potato	mitochondrion	83.26	83.62
VIT_13s0156g00180.t01	Wine grape	mitochondrion	83.05	83.05
Solyc01g073740.2.1	Tomato	plastid	80.93	80.59
KXG29695	Sorghum	mitochondrion	80.51	80.51
Zm00001d053685_P002	Maize	mitochondrion	79.87	79.87
Os02t0194100-01	Rice	mitochondrion	79.66	79.66
TraesCS6A01G167300.1	Wheat	mitochondrion	79.45	79.45
TraesCS6B01G194700.1	Wheat	mitochondrion	79.45	79.45
Os11t0538900-01	Rice	mitochondrion	79.66	76.11
TraesCS6D01G155800.1	Wheat	mitochondrion	79.45	75.15
GSMUA_Achr4P19260_001	Banana	mitochondrion	76.91	74.23
HORVU6Hr1G033980.6	Barley	plastid	75.85	73.51
Zm00001d053684_P005	Maize	mitochondrion	75.21	73.35
KRH13859	Soybean	mitochondrion	73.31	73.31
KRH43565	Soybean	mitochondrion	73.31	73.31
Zm00001d015856_P007	Maize	mitochondrion	73.31	70.9
Bra007416.1-P	Field mustard	cytosol	21.4	22.49
Bra003355.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	24.15	22.44
Bra014554.1-P	Field mustard	cytosol	22.03	22.13
Bra007417.1-P	Field mustard	cytosol	23.73	22.09
Bra004720.1-P	Field mustard	cytosol	23.73	21.96

Protein Annotations

Gene3D:1.10.230.10	Gene3D:1.10.580.10	MapMan:2.3.1	EnsemblPlantsGene:Bra014513	EnsemblPlants:Bra014513.1	EnsemblPlants:Bra014513.1-P
InterPro:Citrate_synth-like_lrg_a-sub	InterPro:Citrate_synth-like_sm_a-sub	InterPro:Citrate_synthase	InterPro:Citrate_synthase_AS	InterPro:Citrate_synthase_euk	InterPro:Citrate_synthase_sf
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004108	GO:GO:0006091	GO:GO:0006099
GO:GO:0006101	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0046912
InterPro:IPR016142	InterPro:IPR016143	UniProt:M4DDE5	PFAM:PF00285	PRINTS:PR00143	ScanProsite:PS00480
PANTHER:PTHR11739	PANTHER:PTHR11739:SF8	SUPFAM:SSF48256	TIGRFAMs:TIGR01793	UniParc:UPI0002543DE4	SEG:seg

Description

AT3G60100 (E=2e-221) CSY5 | CSY5 (citrate synthase 5); citrate (SI)-synthase/ transferase, transferring acyl groups, acyl groups converted into alkyl on transfer

Coordinates

chrA04:-:1137848..1141309

Molecular Weight (calculated)

52467.5 Da

IEP (calculated)

7.151

GRAVY (calculated)

-0.113

Length

472 amino acids

Sequence
(BLAST)

001: MVFLRSVSAI SRLRSRVAKQ SSVSYSVRWI QTQGSSDLDL KSQLQEIIPE QQDRLKKLKS QHGTVPVGNI TVDMVLGGMR GMTGLLWETS LLDAEEGIRF
101: RGMSIPECQK VLPAAQPGGE PLPEGLLWLL LTGKVPNKEQ VDALSKELAS RAAVPDYVYK AINALPLTAH PMTQFASGVM ALQVESEFQK AYEEGVVHKS
201: KFWEPTFEDA LNLIARVPVV ASYVYRRMFK DGSIIPLDDS LDYGANFSHM LGFDSPQMKE LMRLYVTIHS DHEGGNVSAH AGHLVGSALS DPYLAFAAAL
301: NGLAGPLHGL ANQEVLLWIK SVVEECGENI SKEQLKDYVW KTLNSGKVVP GYGHGVLRKT DPRYVCQREF ALKHLPDDPL FQLVSKLYEV VPPILTELGK
401: VKNPWPNVDA HSGVLLNYYG LTEARYYTVL FGVSRSLGIC SQLIWDRALG LPLERPKSVN MDWLDKFMSL SR

Best Arabidopsis Sequence Match ( AT3G60100.2 )
(BLAST)

001: MVFFRSVSAI SRLRSRAVQQ SSLSNSVRWL HSSELDLKSQ MQEIIPEQQD RLKKLKSEQG KVPVGNITVD MVLGGMRGMT GLLWETSLLD ADEGIRFRGM
101: SIPECQKILP SAESGEEPLP ESLLWLLLTG KVPTKEQANA LSTELAHRAA VPDYIYKAID ALPSTAHPMT QFASGVMALQ VQSEFQKAYE QGDISKSKYW
201: EPTFEDALNL IARVPVVASY VYRRMYKDGS IIPLDDSLDY GANFSHMLGF DSPQMKELMR LYVTIHSDHE GGNVSAHAGH LVGSALSDPY LSFAAALNGL
301: AGPLHGLANQ EVLLWIKLVV EECGESISKE QLKDYVWKTL NSGKVVPGYG HGVLRKTDPR YICQREFALK HLPDDPLFQL VSKLYEVVPP ILTELGKVKN
401: PWPNVDAHSG VLLNYYGLTE ARYYTVLFGV SRSLGICSQL IWDRALGLPL ERPKSVNMDW LDNFTRLNR

Arabidopsis Description

CSY5Citrate synthase [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSJ6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.