Factsheet for AT4G10430.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033173.1-P	Field mustard	cytosol, peroxisome, plasma membrane	89.05	89.31
CDX94258	Canola	cytosol, peroxisome, plasma membrane	88.76	88.25
KRH36308	Soybean	cytosol, peroxisome, plasma membrane	74.64	73.16
VIT_02s0025g03210.t01	Wine grape	cytosol, peroxisome, plasma membrane	76.08	73.13
KRG93048	Soybean	cytosol, peroxisome, plasma membrane	73.78	72.32
AT1G33230.2	Thale cress	plastid	72.05	70.62
Solyc03g096810.2.1	Tomato	nucleus	68.59	64.15
PGSC0003DMT400001473	Potato	cytosol, peroxisome, plasma membrane	68.01	63.61
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	65.71	61.96
Os08t0152800-00	Rice	peroxisome	63.11	60.83
HORVU7Hr1G071960.1	Barley	nucleus, peroxisome, plasma membrane	63.11	60.33
Os02t0106800-01	Rice	plasma membrane	61.1	59.89
Zm00001d024602_P001	Maize	plasma membrane	63.4	59.78
TraesCS7D01G298800.1	Wheat	nucleus, peroxisome, plasma membrane	62.82	59.73
EES14557	Sorghum	peroxisome	63.98	59.68
TraesCS7A01G303400.1	Wheat	nucleus, peroxisome, plasma membrane	62.54	59.45
TraesCS7B01G203600.1	Wheat	nucleus, peroxisome, plasma membrane	62.54	59.45
TraesCS6D01G028000.1	Wheat	nucleus, peroxisome, plasma membrane	61.67	59.12
Zm00001d049571_P001	Maize	peroxisome	63.11	58.87
TraesCS6A01G024600.1	Wheat	nucleus, peroxisome, plasma membrane	61.38	58.84
EES04336	Sorghum	cytosol	59.37	58.19
GSMUA_Achr2P17850_001	Banana	plasma membrane	67.44	56.8
HORVU6Hr1G004260.1	Barley	cytosol	58.5	55.01
Zm00001d014951_P002	Maize	cytosol	52.16	50.28
GSMUA_AchrUn_...	Banana	cytosol	13.26	42.2

Protein Annotations

MapMan:35.2	EntrezGene:826635	ProteinID:AEE82881.1	ProteinID:AEE82882.1	ArrayExpress:AT4G10430	EnsemblPlantsGene:AT4G10430
RefSeq:AT4G10430	TAIR:AT4G10430	RefSeq:AT4G10430-TAIR-G	EnsemblPlants:AT4G10430.1	TAIR:AT4G10430.1	EMBL:AY059867
EMBL:AY093326	Unigene:At.3020	GO:GO:0005575	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
RefSeq:NP_567356.1	RefSeq:NP_974529.1	PFAM:PF07851	PO:PO:0000293	PANTHER:PTHR21433	PANTHER:PTHR21433:SF0
UniProt:Q93XX0	InterPro:TMPIT	TMHMM:TMhelix	UniParc:UPI000009F547	SEG:seg	:

Description

TMPIT-like protein [Source:UniProtKB/TrEMBL;Acc:Q93XX0]

Coordinates

chr4:-:6454813..6458146

Molecular Weight (calculated)

39897.3 Da

IEP (calculated)

9.870

GRAVY (calculated)

0.007

Length

347 amino acids

Sequence
(BLAST)

001: MEVEEEVKQI IDEVKELHDS AASFISSSSQ QELSLRQKAS AVDSSIRRLH STIVSNKNLD PKLVEKLEED LHRARCMLVD GETSSFLPSK PQGRFVRMFC
101: GPVNVRALRK DVQLKVKEEY NRYRDKTALL FLFFPATLLI LRSYYWGGCL PAFPVQLYEA WLLFLYAGLA MRENILRANG SDIRPWWLYH HYCAMAMALV
201: SLTWEIKGQP NCVQKQRGVH LFLQWAMMQG VAMLLQNRYQ RQRLYTRIAL GKAKRMDVVW GETAGVDGQL WLLCPILFIL QVFEAYVGLL LLRKTVTGVV
301: NEWQVMVCGI LLVVMAVGNF INTVETLMAK SRVKAKMKRS KSRAELN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.