CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 2
cytosol 1
peroxisome 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049571_P001	Maize	peroxisome	91.13	91.13
Zm00001d024602_P001	Maize	plasma membrane	89.78	90.76
Os08t0152800-00	Rice	peroxisome	83.6	86.39
HORVU7Hr1G071960.1	Barley	nucleus, peroxisome, plasma membrane	81.45	83.47
TraesCS7B01G203600.1	Wheat	nucleus, peroxisome, plasma membrane	80.11	81.64
TraesCS7A01G303400.1	Wheat	nucleus, peroxisome, plasma membrane	80.11	81.64
TraesCS7D01G298800.1	Wheat	nucleus, peroxisome, plasma membrane	80.11	81.64
CDY70518	Canola	endoplasmic reticulum, golgi, plasma membrane	52.69	78.4
CDY70882	Canola	mitochondrion	25.54	76.61
CDY62149	Canola	extracellular, golgi	34.68	75.0
CDY62148	Canola	plasma membrane	58.6	73.9
Bra036730.1-P	Field mustard	cytosol, peroxisome, plasma membrane	61.02	70.5
CDX85978	Canola	cytosol, peroxisome, plasma membrane	61.56	70.03
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	67.74	68.48
VIT_02s0025g03210.t01	Wine grape	cytosol, peroxisome, plasma membrane	64.78	66.76
Bra040009.1-P	Field mustard	cytosol, peroxisome, plasma membrane	62.1	66.57
EES04336	Sorghum	cytosol	63.17	66.38
KRG93048	Soybean	cytosol, peroxisome, plasma membrane	62.9	66.1
KRH36308	Soybean	cytosol, peroxisome, plasma membrane	62.63	65.82
Bra033173.1-P	Field mustard	cytosol, peroxisome, plasma membrane	61.02	65.61
CDY44965	Canola	cytosol, peroxisome, plasma membrane	62.37	65.35
CDX94258	Canola	cytosol, peroxisome, plasma membrane	60.48	64.47
AT4G10430.1	Thale cress	cytosol, peroxisome, plasma membrane	59.68	63.98
Solyc03g096810.2.1	Tomato	nucleus	62.9	63.07
PGSC0003DMT400001473	Potato	cytosol, peroxisome, plasma membrane	62.63	62.8
AT1G33230.2	Thale cress	plastid	59.41	62.43
GSMUA_Achr2P17850_001	Banana	plasma membrane	68.55	61.89
CDX93786	Canola	cytosol, peroxisome, plasma membrane	48.66	61.36
CDY25256	Canola	cytosol, nucleus, plastid	21.24	38.16

Protein Annotations

EnsemblPlants:EES14557	EnsemblPlantsGene:SORBI_3007G042300	EntrezGene:8067841	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:TMPIT	ncoils:Coil	PANTHER:PTHR21433	PANTHER:PTHR21433:SF4	PFAM:PF07851	ProteinID:EES14557
ProteinID:EES14557.1	RefSeq:XP_002445062.1	SEG:seg	TMHMM:TMhelix	unigene:Sbi.16729	UniParc:UPI0001A87B7A
UniProt:C5YGW5	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:4200312..4204833

Molecular Weight (calculated)

41639.0 Da

IEP (calculated)

9.544

GRAVY (calculated)

-0.013

Length

372 amino acids

Sequence
(BLAST)

001: MGEEERKGGA DDGAAAAAAA RAAEQARELQ DAAAALLTRT RAEEEALRRR AAALQVELRR LREAAAASHA DSDKVEEDLD RATCLIADGD VASLLPSKTQ
101: GAFLKMFLGP VNLRATRKEV QLKVKEEYNS YRDRTALLFL GFPVILLFLR QWLWNGCFPA LPVQLYQAWL LFLYTSLALR ENILRVNGSD IRPWWILHHY
201: CAMLMSLISL TWEIKGQPNC ARKQRGVELF LCWAIMQGFV MMLQNRYQRQ RLYTRIALGK AKRMDVVWGE TAGVEGQLLL LCPLLFLLQG FEGYVGFLLL
301: RTAHTGVVPE WQVVVCGILL VAMAIGNFAN TVDTLMTKSR FKAKMKKSKG KRDLDTCPSP TGSLPTDSTT KA

Best Arabidopsis Sequence Match ( AT1G33230.1 )
(BLAST)

001: MEEVEEEVRR IVEQVKELHD SSTSFVSSSS QEELSLRNRA SVVDSSIRRL HSTLASDKHL DPKLFEKLEE DLQRARCMLA DGDTSSFLPS KPQGRFVRMF
101: LGPVNVRASR KDIQLKVKEE YNSYRDRTAL LFLVFPAILL TLRSYVWDGC LPAFPVQLYQ AWLLFLYAGL VMRENILRAN GSDIRSWWLY HHYFAMAMSL
201: VSLTWEIKGQ PNCVQKQKGV RLFLQWAMMQ GVAMLLQNRY QRQRLYTRIA LGKAKRMDVV WGETAGVDGQ LLLLFPILFT LQGFEAYVGF QLLRTVLMGV
301: VAEWQVLVCG ILLVVMAIGN FINTVETLMV KSRFKAKMKR SKSRAEL

Arabidopsis Description

TMPIT-like protein [Source:TAIR;Acc:AT1G33230]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.