CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	21.26	40.37
CDX94258	Canola	cytosol, peroxisome, plasma membrane	63.77	37.82
CDX93786	Canola	cytosol, peroxisome, plasma membrane	52.66	36.95
CDY44965	Canola	cytosol, peroxisome, plasma membrane	56.52	32.96
CDX85978	Canola	cytosol, peroxisome, plasma membrane	50.72	32.11
CDY62148	Canola	plasma membrane	38.16	26.78
KRG93048	Soybean	cytosol, peroxisome, plasma membrane	43.48	25.42
KRH36308	Soybean	cytosol, peroxisome, plasma membrane	43.0	25.14
VIT_02s0025g03210.t01	Wine grape	cytosol, peroxisome, plasma membrane	43.48	24.93
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	41.55	23.37
Solyc03g096810.2.1	Tomato	nucleus	41.06	22.91
Os08t0152800-00	Rice	peroxisome	39.13	22.5
PGSC0003DMT400001473	Potato	cytosol, peroxisome, plasma membrane	40.1	22.37
Zm00001d024602_P001	Maize	plasma membrane	38.65	21.74
TraesCS6D01G028000.1	Wheat	nucleus, peroxisome, plasma membrane	37.68	21.55
TraesCS6A01G024600.1	Wheat	nucleus, peroxisome, plasma membrane	37.68	21.55
EES14557	Sorghum	peroxisome	38.16	21.24
EES04336	Sorghum	cytosol	36.23	21.19
Os02t0106800-01	Rice	plasma membrane	36.23	21.19
Zm00001d014951_P002	Maize	cytosol	36.23	20.83
Zm00001d049571_P001	Maize	peroxisome	37.2	20.7
HORVU7Hr1G071960.1	Barley	nucleus, peroxisome, plasma membrane	36.23	20.66
GSMUA_Achr2P17850_001	Banana	plasma membrane	41.06	20.63
TraesCS7A01G303400.1	Wheat	nucleus, peroxisome, plasma membrane	36.23	20.55
TraesCS7B01G203600.1	Wheat	nucleus, peroxisome, plasma membrane	36.23	20.55
TraesCS7D01G298800.1	Wheat	nucleus, peroxisome, plasma membrane	36.23	20.55
CDY70518	Canola	endoplasmic reticulum, golgi, plasma membrane	23.19	19.2
HORVU6Hr1G004260.1	Barley	cytosol	31.88	17.89
CDY62149	Canola	extracellular, golgi	8.21	9.88
CDY70882	Canola	mitochondrion	4.35	7.26

Protein Annotations

EnsemblPlants:CDY25256	EnsemblPlantsGene:GSBRNA2T00029301001	GO:A0A078GIP2	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:TMPIT	PANTHER:PTHR21433	PANTHER:PTHR21433:SF0	PFAM:PF07851	ProteinID:CDY25256	ProteinID:CDY25256.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EE9134	UniProt:A0A078GIP2	MapMan:35.2	:

Description

BnaA02g22000DBnaA02g22000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GIP2]

Coordinates

chrLK032172:-:228030..229021

Molecular Weight (calculated)

23581.6 Da

IEP (calculated)

8.480

GRAVY (calculated)

-0.132

Length

207 amino acids

Sequence
(BLAST)

001: MEVEEEVKRM VEEVKELHDS AASFISSSSH QELTLRQKAS SVDASLRRLH STLASDKSLD PKLEEDLHRA RCMLADGDLS SFLPSKPQGR FVRMFLGPVN
101: VRASRKDIQL KVKEEYNSYR VRQDCASLSV LSCSTHDSQI FLLGWMFACL SCSALRGLAL VPLCWVGYAR ERIKSQRERY PSMVLLLLCS LHYGLFSNVY
201: LRVILSY

Best Arabidopsis Sequence Match ( AT4G10430.1 )
(BLAST)

001: MEVEEEVKQI IDEVKELHDS AASFISSSSQ QELSLRQKAS AVDSSIRRLH STIVSNKNLD PKLVEKLEED LHRARCMLVD GETSSFLPSK PQGRFVRMFC
101: GPVNVRALRK DVQLKVKEEY NRYRDKTALL FLFFPATLLI LRSYYWGGCL PAFPVQLYEA WLLFLYAGLA MRENILRANG SDIRPWWLYH HYCAMAMALV
201: SLTWEIKGQP NCVQKQRGVH LFLQWAMMQG VAMLLQNRYQ RQRLYTRIAL GKAKRMDVVW GETAGVDGQL WLLCPILFIL QVFEAYVGLL LLRKTVTGVV
301: NEWQVMVCGI LLVVMAVGNF INTVETLMAK SRVKAKMKRS KSRAELN

Arabidopsis Description

TMPIT-like protein [Source:UniProtKB/TrEMBL;Acc:Q93XX0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.