CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036730.1-P	Field mustard	cytosol, peroxisome, plasma membrane	90.42	99.69
CDY70518	Canola	endoplasmic reticulum, golgi, plasma membrane	68.45	97.2
CDY62149	Canola	extracellular, golgi	46.48	95.93
CDY62148	Canola	plasma membrane	79.15	95.25
CDX85978	Canola	cytosol, peroxisome, plasma membrane	87.32	94.8
CDX93786	Canola	cytosol, peroxisome, plasma membrane	74.93	90.17
CDY70882	Canola	mitochondrion	30.14	86.29
CDX94258	Canola	cytosol, peroxisome, plasma membrane	82.25	83.67
AT1G33230.2	Thale cress	plastid	77.75	77.97
VIT_02s0025g03210.t01	Wine grape	cytosol, peroxisome, plasma membrane	74.08	72.85
KRG93048	Soybean	cytosol, peroxisome, plasma membrane	72.39	72.6
KRH36308	Soybean	cytosol, peroxisome, plasma membrane	71.83	72.03
Solyc03g096810.2.1	Tomato	nucleus	67.32	64.42
Os08t0152800-00	Rice	peroxisome	64.79	63.89
PGSC0003DMT400001473	Potato	cytosol, peroxisome, plasma membrane	66.76	63.88
Zm00001d024602_P001	Maize	plasma membrane	65.07	62.77
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	64.79	62.5
EES14557	Sorghum	peroxisome	65.35	62.37
HORVU7Hr1G071960.1	Barley	nucleus, peroxisome, plasma membrane	63.38	61.98
Os02t0106800-01	Rice	plasma membrane	61.13	61.3
TraesCS7B01G203600.1	Wheat	nucleus, peroxisome, plasma membrane	62.82	61.1
TraesCS7D01G298800.1	Wheat	nucleus, peroxisome, plasma membrane	62.82	61.1
TraesCS7A01G303400.1	Wheat	nucleus, peroxisome, plasma membrane	62.54	60.82
Zm00001d049571_P001	Maize	peroxisome	63.66	60.75
TraesCS6D01G028000.1	Wheat	nucleus, peroxisome, plasma membrane	61.13	59.94
EES04336	Sorghum	cytosol	59.72	59.89
TraesCS6A01G024600.1	Wheat	nucleus, peroxisome, plasma membrane	60.85	59.67
GSMUA_Achr2P17850_001	Banana	plasma membrane	65.92	56.8
CDY25256	Canola	cytosol, nucleus, plastid	32.96	56.52
HORVU6Hr1G004260.1	Barley	cytosol	57.46	55.28
Zm00001d014951_P002	Maize	cytosol	53.24	52.5
GSMUA_AchrUn_...	Banana	cytosol	12.39	40.37

Protein Annotations

EnsemblPlants:CDY44965	EnsemblPlantsGene:GSBRNA2T00081136001	GO:A0A078I2A3	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:TMPIT	PANTHER:PTHR21433	PANTHER:PTHR21433:SF0	PFAM:PF07851	ProteinID:CDY44965	ProteinID:CDY44965.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EEA4B5	UniProt:A0A078I2A3	MapMan:35.2	:

Description

BnaA08g06650DBnaA08g06650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I2A3]

Coordinates

chrLK032607:-:83896..86304

Molecular Weight (calculated)

40636.1 Da

IEP (calculated)

9.723

GRAVY (calculated)

0.030

Length

355 amino acids

Sequence
(BLAST)

001: MEVEEEVRRI VEQVKELNDS ATSFVSSSSH EELSLRKRSS LVDASITRLH STLLSDKHHD PKLLDKAFFS SLSLLEEDLQ RARCMLADGD TCSFLPSKPQ
101: GRFVRMFLGP LNVRASRKDI QLKVKEEYNS YRDRTALLFL VFPAILLTLR SYVWEGCLPA FPVQLYQAWL LFLYAGLAMR ENILRANGSD IRSWWLYHHY
201: CAMAMALVSL TWEIKGQPNC VQKQKGVRLF LQWAMMQGVA MLLQNRYQRQ RLYTRIALGK AKRMDVVWGE TAGVDGQLLL LCPILFTLQG FEAYVGLQLL
301: RTALTGVVGE WQVLICGILL VVMAIGNFIN TVETLMVKSR FKAKMKRSKS RAELD

Best Arabidopsis Sequence Match ( AT1G33230.1 )
(BLAST)

001: MEEVEEEVRR IVEQVKELHD SSTSFVSSSS QEELSLRNRA SVVDSSIRRL HSTLASDKHL DPKLFEKLEE DLQRARCMLA DGDTSSFLPS KPQGRFVRMF
101: LGPVNVRASR KDIQLKVKEE YNSYRDRTAL LFLVFPAILL TLRSYVWDGC LPAFPVQLYQ AWLLFLYAGL VMRENILRAN GSDIRSWWLY HHYFAMAMSL
201: VSLTWEIKGQ PNCVQKQKGV RLFLQWAMMQ GVAMLLQNRY QRQRLYTRIA LGKAKRMDVV WGETAGVDGQ LLLLFPILFT LQGFEAYVGF QLLRTVLMGV
301: VAEWQVLVCG ILLVVMAIGN FINTVETLMV KSRFKAKMKR SKSRAEL

Arabidopsis Description

TMPIT-like protein [Source:TAIR;Acc:AT1G33230]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.