Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plasma membrane 2
- mitochondrion 1
- peroxisome 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44965 | Canola | cytosol, peroxisome, plasma membrane | 99.69 | 90.42 |
| Bra040009.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 95.65 | 88.76 |
| Bra033173.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 86.02 | 80.06 |
| AT1G33230.2 | Thale cress | plastid | 84.16 | 76.55 |
| VIT_02s0025g03210.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 77.64 | 69.25 |
| KRG93048 | Soybean | cytosol, peroxisome, plasma membrane | 75.78 | 68.93 |
| KRH36308 | Soybean | cytosol, peroxisome, plasma membrane | 75.47 | 68.64 |
| Solyc03g096810.2.1 | Tomato | nucleus | 71.74 | 62.26 |
| PGSC0003DMT400001473 | Potato | cytosol, peroxisome, plasma membrane | 71.43 | 61.99 |
| Os08t0152800-00 | Rice | peroxisome | 69.25 | 61.94 |
| Zm00001d024602_P001 | Maize | plasma membrane | 69.88 | 61.14 |
| EES14557 | Sorghum | peroxisome | 70.5 | 61.02 |
| HORVU7Hr1G071960.1 | Barley | nucleus, peroxisome, plasma membrane | 68.63 | 60.88 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plasma membrane | 68.94 | 60.33 |
| TraesCS7D01G298800.1 | Wheat | nucleus, peroxisome, plasma membrane | 68.01 | 60.0 |
| TraesCS7B01G203600.1 | Wheat | nucleus, peroxisome, plasma membrane | 68.01 | 60.0 |
| TraesCS7A01G303400.1 | Wheat | nucleus, peroxisome, plasma membrane | 67.7 | 59.73 |
| Zm00001d049571_P001 | Maize | peroxisome | 68.63 | 59.41 |
| Os02t0106800-01 | Rice | plasma membrane | 64.29 | 58.47 |
| EES04336 | Sorghum | cytosol | 63.04 | 57.34 |
| TraesCS6D01G028000.1 | Wheat | nucleus, peroxisome, plasma membrane | 63.98 | 56.91 |
| TraesCS6A01G024600.1 | Wheat | nucleus, peroxisome, plasma membrane | 63.66 | 56.63 |
| GSMUA_Achr2P17850_001 | Banana | plasma membrane | 69.88 | 54.61 |
| HORVU6Hr1G004260.1 | Barley | cytosol | 60.25 | 52.57 |
| Zm00001d014951_P002 | Maize | cytosol | 55.9 | 50.0 |
| GSMUA_AchrUn_... | Banana | cytosol | 13.66 | 40.37 |
Protein Annotations
| EnsemblPlants:Bra036730.1 | EnsemblPlants:Bra036730.1-P | EnsemblPlantsGene:Bra036730 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:TMPIT | PANTHER:PTHR21433 | PANTHER:PTHR21433:SF0 | PFAM:PF07851 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0002546189 | UniProt:M4F6M0 | MapMan:35.2 | : | : | : |
Description
AT1G33230 (E=1e-151) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TMPIT-like (InterPro:IPR012926); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10430.3); Has 198 Blast hits to 198 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Coordinates
chrA08:-:7581460..7583541
Molecular Weight (calculated)
36942.6 Da
IEP (calculated)
9.750
GRAVY (calculated)
0.051
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVEEEVRRI VEQVKELNDS ATSFVSSSSH EELSLRKRSS LLEEDLQRAR CMLADGDTCS FLPSKPQGRF VRMFLGPLNV RASRKDIQLK VKEEYNSYRD
101: RTALLFLVFP AILLTLRSYV WEGCLPAFPV QLYQAWLLFL YAGLAMRENI LRANGSDIRS WWLYHHYCAM AMALVSLTWE IKGQPNCVQK QKGVRLFLQW
201: AMMQGVAMLL QNRYQRQRLY TRIALGKAKR MDVVWGETAG VDGQLLLLCP ILFTLQGFEA YVGLQLLRTA LTGVVGEWQV LICGILLVVM AIGNFINTVE
301: TLMVKSRFKA KIKRSKSRAE LD
101: RTALLFLVFP AILLTLRSYV WEGCLPAFPV QLYQAWLLFL YAGLAMRENI LRANGSDIRS WWLYHHYCAM AMALVSLTWE IKGQPNCVQK QKGVRLFLQW
201: AMMQGVAMLL QNRYQRQRLY TRIALGKAKR MDVVWGETAG VDGQLLLLCP ILFTLQGFEA YVGLQLLRTA LTGVVGEWQV LICGILLVVM AIGNFINTVE
301: TLMVKSRFKA KIKRSKSRAE LD
001: MEEVEEEVRR IVEQVKELHD SSTSFVSSSS QEELSLRNRA SVVDSSIRRL HSTLASDKHL DPKLFEKLEE DLQRARCMLA DGDTSSFLPS KPQGRFVRMF
101: LGPVNVRASR KDIQLKVKEE YNSYRDRTAL LFLVFPAILL TLRSYVWDGC LPAFPVQLYQ AWLLFLYAGL VMRENILRAN GSDIRSWWLY HHYFAMAMSL
201: VSLTWEIKGQ PNCVQKQKGV RLFLQWAMMQ GVAMLLQNRY QRQRLYTRIA LGKAKRMDVV WGETAGVDGQ LLLLFPILFT LQGFEAYVGF QLLRTVLMGV
301: VAEWQVLVCG ILLVVMAIGN FINTVETLMV KSRFKAKMKR SKSRAEL
101: LGPVNVRASR KDIQLKVKEE YNSYRDRTAL LFLVFPAILL TLRSYVWDGC LPAFPVQLYQ AWLLFLYAGL VMRENILRAN GSDIRSWWLY HHYFAMAMSL
201: VSLTWEIKGQ PNCVQKQKGV RLFLQWAMMQ GVAMLLQNRY QRQRLYTRIA LGKAKRMDVV WGETAGVDGQ LLLLFPILFT LQGFEAYVGF QLLRTVLMGV
301: VAEWQVLVCG ILLVVMAIGN FINTVETLMV KSRFKAKMKR SKSRAEL
Arabidopsis Description
TMPIT-like protein [Source:TAIR;Acc:AT1G33230]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.