Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- golgi 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY62149 | Canola | extracellular, golgi | 86.29 | 62.21 |
| CDY70518 | Canola | endoplasmic reticulum, golgi, plasma membrane | 87.9 | 43.6 |
| CDY62148 | Canola | plasma membrane | 86.29 | 36.27 |
| CDX94258 | Canola | cytosol, peroxisome, plasma membrane | 99.19 | 35.24 |
| CDX85978 | Canola | cytosol, peroxisome, plasma membrane | 87.9 | 33.33 |
| CDY44965 | Canola | cytosol, peroxisome, plasma membrane | 86.29 | 30.14 |
| KRH36308 | Soybean | cytosol, peroxisome, plasma membrane | 82.26 | 28.81 |
| KRG93048 | Soybean | cytosol, peroxisome, plasma membrane | 82.26 | 28.81 |
| VIT_02s0025g03210.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 83.06 | 28.53 |
| PGSC0003DMT400001473 | Potato | cytosol, peroxisome, plasma membrane | 77.42 | 25.88 |
| Solyc03g096810.2.1 | Tomato | nucleus | 77.42 | 25.88 |
| Os02t0106800-01 | Rice | plasma membrane | 73.39 | 25.71 |
| HORVU7Hr1G071960.1 | Barley | nucleus, peroxisome, plasma membrane | 75.0 | 25.62 |
| Zm00001d024602_P001 | Maize | plasma membrane | 75.81 | 25.54 |
| EES14557 | Sorghum | peroxisome | 76.61 | 25.54 |
| TraesCS7B01G203600.1 | Wheat | nucleus, peroxisome, plasma membrane | 75.0 | 25.48 |
| TraesCS7A01G303400.1 | Wheat | nucleus, peroxisome, plasma membrane | 75.0 | 25.48 |
| TraesCS7D01G298800.1 | Wheat | nucleus, peroxisome, plasma membrane | 75.0 | 25.48 |
| Zm00001d049571_P001 | Maize | peroxisome | 75.81 | 25.27 |
| EES04336 | Sorghum | cytosol | 71.77 | 25.14 |
| TraesCS6D01G028000.1 | Wheat | nucleus, peroxisome, plasma membrane | 72.58 | 24.86 |
| Os08t0152800-00 | Rice | peroxisome | 71.77 | 24.72 |
| TraesCS6A01G024600.1 | Wheat | nucleus, peroxisome, plasma membrane | 71.77 | 24.59 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plasma membrane | 71.77 | 24.18 |
| HORVU6Hr1G004260.1 | Barley | cytosol | 71.77 | 24.12 |
| GSMUA_Achr2P17850_001 | Banana | plasma membrane | 76.61 | 23.06 |
| CDX93786 | Canola | cytosol, peroxisome, plasma membrane | 44.35 | 18.64 |
| Zm00001d014951_P002 | Maize | cytosol | 51.61 | 17.78 |
| CDY25256 | Canola | cytosol, nucleus, plastid | 7.26 | 4.35 |
| GSMUA_AchrUn_... | Banana | cytosol | 3.23 | 3.67 |
Protein Annotations
| EnsemblPlants:CDY70882 | EnsemblPlantsGene:GSBRNA2T00008169001 | GO:A0A078JYY8 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:TMPIT | PANTHER:PTHR21433 | PANTHER:PTHR21433:SF0 | PFAM:PF07851 | ProteinID:CDY70882 | ProteinID:CDY70882.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EDFE7B | UniProt:A0A078JYY8 | MapMan:35.2 | : |
Description
BnaAnng35420DBnaAnng35420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JYY8]
Coordinates
chrLK043626:-:1787..2922
Molecular Weight (calculated)
13856.6 Da
IEP (calculated)
10.861
GRAVY (calculated)
0.381
Length
124 amino acids
Sequence
(BLAST)
(BLAST)
001: MMQGVAMLLQ NRYQRQRLYT RIALGKAKRM DVVWGETAGV DGQLWLLCPI LFILQGFQAY VGVLLLRAAL TGVVAEWQVM VCGILLVVMA VGNFINTVET
101: LMAKSRVKAK MKKSKSRAEL NHTS
101: LMAKSRVKAK MKKSKSRAEL NHTS
001: MEEVEEEVRR IVEQVKELHD SSTSFVSSSS QEELSLRNRA SVVDSSIRRL HSTLASDKHL DPKLFEKLEE DLQRARCMLA DGDTSSFLPS KPQGRFVRMF
101: LGPVNVRASR KDIQLKVKEE YNSYRDRTAL LFLVFPAILL TLRSYVWDGC LPAFPVQLYQ AWLLFLYAGL VMRENILRAN GSDIRSWWLY HHYFAMAMSL
201: VSLTWEIKGQ PNCVQKQKGV RLFLQWAMMQ GVAMLLQNRY QRQRLYTRIA LGKAKRMDVV WGETAGVDGQ LLLLFPILFT LQGFEAYVGF QLLRTVLMGV
301: VAEWQVLVCG ILLVVMAIGN FINTVETLMV KSRFKAKMKR SKSRAEL
101: LGPVNVRASR KDIQLKVKEE YNSYRDRTAL LFLVFPAILL TLRSYVWDGC LPAFPVQLYQ AWLLFLYAGL VMRENILRAN GSDIRSWWLY HHYFAMAMSL
201: VSLTWEIKGQ PNCVQKQKGV RLFLQWAMMQ GVAMLLQNRY QRQRLYTRIA LGKAKRMDVV WGETAGVDGQ LLLLFPILFT LQGFEAYVGF QLLRTVLMGV
301: VAEWQVLVCG ILLVVMAIGN FINTVETLMV KSRFKAKMKR SKSRAEL
Arabidopsis Description
TMPIT-like protein [Source:TAIR;Acc:AT1G33230]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.