Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78567 | Canola | nucleus | 92.58 | 92.58 |
| Bra006245.1-P | Field mustard | nucleus | 92.58 | 92.58 |
| CDX69595 | Canola | nucleus | 91.41 | 91.41 |
| CDY57895 | Canola | nucleus | 91.41 | 91.41 |
| CDX70549 | Canola | nucleus | 89.84 | 90.91 |
| Bra008770.1-P | Field mustard | nucleus | 90.62 | 90.62 |
| CDX91077 | Canola | nucleus | 66.02 | 85.35 |
| VIT_14s0171g00260.t01 | Wine grape | cytosol | 71.88 | 73.02 |
| KRH27547 | Soybean | cytosol | 69.53 | 72.65 |
| KRG94316 | Soybean | cytosol | 69.53 | 72.65 |
| Bra023452.1-P | Field mustard | endoplasmic reticulum, extracellular | 43.36 | 72.08 |
| PGSC0003DMT400029686 | Potato | cytosol | 69.92 | 71.31 |
| Solyc10g078830.1.1 | Tomato | cytosol | 69.92 | 71.31 |
| CDX85609 | Canola | endoplasmic reticulum, extracellular | 26.95 | 70.41 |
| Zm00001d036057_P002 | Maize | cytosol | 66.8 | 68.4 |
| Zm00001d039560_P002 | Maize | cytosol | 66.8 | 68.4 |
| Os01t0184800-01 | Rice | cytosol, nucleus, plastid | 66.8 | 68.13 |
| EES00161 | Sorghum | cytosol | 66.02 | 67.6 |
| GSMUA_Achr6P08390_001 | Banana | cytosol | 66.02 | 67.06 |
| TraesCS2A01G124900.1 | Wheat | cytosol | 64.06 | 65.34 |
| TraesCS2B01G147400.1 | Wheat | cytosol | 64.06 | 65.34 |
| TraesCS2D01G127800.1 | Wheat | cytosol, nucleus, plastid | 64.06 | 65.34 |
| TraesCS3A01G112100.1 | Wheat | cytosol | 62.5 | 65.04 |
| TraesCS3B01G131900.1 | Wheat | cytosol | 61.72 | 64.23 |
| TraesCS3D01G114100.1 | Wheat | plastid | 62.89 | 51.44 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:35.2 | EntrezGene:831274 | UniProt:A0A178UI53 | ProteinID:AED92004.1 | ArrayExpress:AT5G14240 |
| EnsemblPlantsGene:AT5G14240 | RefSeq:AT5G14240 | TAIR:AT5G14240 | RefSeq:AT5G14240-TAIR-G | EnsemblPlants:AT5G14240.1 | TAIR:AT5G14240.1 |
| Unigene:At.31959 | EMBL:BT000966 | ProteinID:CAB87763.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008479 | GO:GO:0008616 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | RefSeq:NP_196928.1 |
| ProteinID:OAO93478.1 | PFAM:PF02114 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR21148 |
| PANTHER:PTHR21148:SF1 | InterPro:Phosducin_thioredoxin-like_dom | UniProt:Q9LYA5 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | UniParc:UPI00000ABFD2 |
| SEG:seg | : | : | : | : | : |
Description
Thioredoxin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYA5]
Coordinates
chr5:-:4595928..4597708
Molecular Weight (calculated)
28750.4 Da
IEP (calculated)
4.471
GRAVY (calculated)
-0.678
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MADYHFVYKD IEGASTQWDD IQRKLGNLPE KAPAFKPPAY TPAEDESSAP KDQAWFDKKT EEELEDLEDD KDLDDDRFLE EYRKKRLSEL REAAKVKRYG
101: TVTPISGSDF VREVTQASAE DWVVVCLYKD GVAECSLLLG CLDELGSRYP ATKFVKIIST DCIPNYPDCN LPTLLVYHHG AIKGTHVGLK SFGRRCTPES
201: VALLLCQSEP VLNDGKGGDD DSSREAVMAG VRRQFIERVV KDHEDKDNDD GGYNSD
101: TVTPISGSDF VREVTQASAE DWVVVCLYKD GVAECSLLLG CLDELGSRYP ATKFVKIIST DCIPNYPDCN LPTLLVYHHG AIKGTHVGLK SFGRRCTPES
201: VALLLCQSEP VLNDGKGGDD DSSREAVMAG VRRQFIERVV KDHEDKDNDD GGYNSD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.