Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G70030.1 | Thale cress | cytosol | 37.42 | 36.25 |
| AT5G15040.2 | Thale cress | cytoskeleton, cytosol, nucleus | 20.0 | 35.63 |
| AT1G24200.1 | Thale cress | cytosol | 40.65 | 32.14 |
| AT5G15025.1 | Thale cress | cytosol, nucleus, peroxisome | 21.29 | 27.05 |
| AT1G27250.1 | Thale cress | nucleus | 23.23 | 26.28 |
| AT5G15030.1 | Thale cress | endoplasmic reticulum | 22.58 | 25.18 |
| AT1G24210.1 | Thale cress | cytosol | 23.23 | 23.23 |
| AT1G27240.1 | Thale cress | cytosol | 23.87 | 19.89 |
| AT1G24230.1 | Thale cress | cytosol | 26.45 | 16.73 |
| AT1G27280.1 | Thale cress | cytosol | 23.87 | 16.44 |
| AT1G27220.1 | Thale cress | nucleus | 19.35 | 16.3 |
| AT1G27260.1 | Thale cress | cytosol | 23.23 | 16.22 |
| AT1G27270.1 | Thale cress | cytosol | 23.23 | 14.94 |
| AT1G23810.1 | Thale cress | cytosol, nucleus, peroxisome | 21.94 | 14.11 |
| AT1G24250.1 | Thale cress | cytosol | 22.58 | 13.89 |
| AT1G70060.2 | Thale cress | nucleus | 47.74 | 5.58 |
| AT1G59890.2 | Thale cress | nucleus | 40.65 | 5.4 |
| AT1G24190.3 | Thale cress | nucleus | 45.81 | 5.31 |
| AT1G24220.1 | Thale cress | nucleus | 24.52 | 5.11 |
| AT5G15020.1 | Thale cress | nucleus | 44.52 | 5.05 |
| AT1G10450.3 | Thale cress | endoplasmic reticulum, plastid | 38.06 | 5.03 |
| AT3G01320.1 | Thale cress | mitochondrion, nucleus | 44.52 | 5.03 |
| AT1G10250.1 | Thale cress | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.1160.11 | MapMan:35.1 | EntrezGene:833533 | ProteinID:AED93990.1 | ArrayExpress:AT5G35610 | EnsemblPlantsGene:AT5G35610 |
| RefSeq:AT5G35610 | TAIR:AT5G35610 | RefSeq:AT5G35610-TAIR-G | EnsemblPlants:AT5G35610.1 | TAIR:AT5G35610.1 | Unigene:At.55139 |
| ProteinID:BAB09302.1 | GO:GO:0000118 | GO:GO:0000122 | GO:GO:0000785 | GO:GO:0001106 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004407 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005654 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016575 | GO:GO:0016787 | GO:GO:0019538 |
| InterPro:IPR003822 | RefSeq:NP_198411.1 | InterPro:PAH | InterPro:PAH_sf | PFAM:PF02671 | PFscan:PS51477 |
| PANTHER:PTHR12346 | PANTHER:PTHR12346:SF8 | UniProt:Q9FJS7 | SUPFAM:SSF47762 | UniParc:UPI00000A8E44 | : |
Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9FJS7]
Coordinates
chr5:-:13819506..13820293
Molecular Weight (calculated)
18340.4 Da
IEP (calculated)
9.550
GRAVY (calculated)
-0.608
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MSASKITKSN PRKYLKIVKN KLQNKREIYV RFLQVMTAYS AQRIDPSGVK SVVKELFKED QEPISGFNTF LPKGFEIKPE CDQNGFKIKL ECEQTPPKKY
101: VDIEYSEALD FVRKVKDDDR IYKSFVTIMD MYKKKNKSLD EVCREVYMCV YLLQY
101: VDIEYSEALD FVRKVKDDDR IYKSFVTIMD MYKKKNKSLD EVCREVYMCV YLLQY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.