Factsheet for AT1G23810.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G24250.1	Thale cress	cytosol	87.14	83.33
AT1G27270.1	Thale cress	cytosol	68.46	68.46
AT1G27260.1	Thale cress	cytosol	57.68	62.61
AT1G24210.1	Thale cress	cytosol	28.63	44.52
AT1G24230.1	Thale cress	cytosol	45.23	44.49
AT1G27280.1	Thale cress	cytosol	34.02	36.44
AT1G27240.1	Thale cress	cytosol	26.56	34.41
AT5G15040.2	Thale cress	cytoskeleton, cytosol, nucleus	10.79	29.89
AT1G70030.1	Thale cress	cytosol	19.09	28.75
AT5G15025.1	Thale cress	cytosol, nucleus, peroxisome	14.11	27.87
AT5G15030.1	Thale cress	endoplasmic reticulum	14.94	25.9
AT1G24200.1	Thale cress	cytosol	20.75	25.51
AT1G27250.1	Thale cress	nucleus	14.11	24.82
AT5G35610.1	Thale cress	cytosol	14.11	21.94
AT1G27220.1	Thale cress	nucleus	13.28	17.39
AT1G24220.1	Thale cress	nucleus	50.62	16.4
VIT_17s0000g07540.t01	Wine grape	nucleus	12.45	16.13
AT1G59890.2	Thale cress	nucleus	23.24	4.8
AT1G10450.3	Thale cress	endoplasmic reticulum, plastid	21.58	4.43
AT5G15020.1	Thale cress	nucleus	24.9	4.39
AT1G70060.2	Thale cress	nucleus	24.07	4.37
AT1G24190.3	Thale cress	nucleus	24.07	4.33
AT3G01320.1	Thale cress	mitochondrion, nucleus	24.48	4.3
AT1G10250.1	Thale cress	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.1160.11	MapMan:35.1	EntrezGene:838992	UniProt:A0A178WGF3	ProteinID:AAC98036.1	ProteinID:AEE30434.1
ArrayExpress:AT1G23810	EnsemblPlantsGene:AT1G23810	RefSeq:AT1G23810	TAIR:AT1G23810	RefSeq:AT1G23810-TAIR-G	EnsemblPlants:AT1G23810.1
TAIR:AT1G23810.1	Unigene:At.51744	GO:GO:0000118	GO:GO:0000122	GO:GO:0000785	GO:GO:0001106
GO:GO:0003674	GO:GO:0003824	GO:GO:0004407	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005654	GO:GO:0006139	GO:GO:0006355	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016575	GO:GO:0016787
GO:GO:0019538	InterPro:IPR003822	RefSeq:NP_173793.1	ProteinID:OAP16182.1	InterPro:PAH	InterPro:PAH_sf
PFAM:PF02671	PFscan:PS51477	PANTHER:PTHR12346	PANTHER:PTHR12346:SF0	UniProt:Q9ZUB5	SUPFAM:SSF47762
UniParc:UPI00000A215D	:	:	:	:	:

Description

F5O8.36 [Source:UniProtKB/TrEMBL;Acc:Q9ZUB5]

Coordinates

chr1:+:8417495..8418566

Molecular Weight (calculated)

26860.3 Da

IEP (calculated)

5.912

GRAVY (calculated)

-0.218

Length

241 amino acids

Sequence
(BLAST)

001: MAGGSKSPAS SLEDGKAYVN AVKVALEEAE PAKYQEFLRL FHEVIARRMG MATFSARMQD LLKDHPSLCL GLNVMLAPEY QRAIPPEASE EFHKVVGRSV
101: PRPEPTIDDA TSYLIAVKEA FHDEPAKYEE MLKLLNDFKA RRVNAASVIA RVEELMKDHS NLLFGFCVFL SATTSFTTKL KAKFQGDGSQ VVDSVLQIMR
201: MYGEGNKSKH DAYQEIVALV QGHDDLVMEL SQIFTDPSTR V

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.