Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G23810.1 | Thale cress | cytosol, nucleus, peroxisome | 68.46 | 68.46 |
| AT1G24250.1 | Thale cress | cytosol | 67.22 | 64.29 |
| AT1G27260.1 | Thale cress | cytosol | 54.36 | 59.01 |
| AT1G24210.1 | Thale cress | cytosol | 28.63 | 44.52 |
| AT1G24230.1 | Thale cress | cytosol | 42.74 | 42.04 |
| AT1G27280.1 | Thale cress | cytosol | 36.51 | 39.11 |
| AT1G27240.1 | Thale cress | cytosol | 25.31 | 32.8 |
| AT5G15040.2 | Thale cress | cytoskeleton, cytosol, nucleus | 11.62 | 32.18 |
| AT1G70030.1 | Thale cress | cytosol | 19.92 | 30.0 |
| AT5G15025.1 | Thale cress | cytosol, nucleus, peroxisome | 14.52 | 28.69 |
| AT1G24200.1 | Thale cress | cytosol | 22.82 | 28.06 |
| AT5G15030.1 | Thale cress | endoplasmic reticulum | 14.52 | 25.18 |
| AT1G27250.1 | Thale cress | nucleus | 13.69 | 24.09 |
| AT5G35610.1 | Thale cress | cytosol | 14.94 | 23.23 |
| AT1G27220.1 | Thale cress | nucleus | 12.45 | 16.3 |
| AT1G24220.1 | Thale cress | nucleus | 48.96 | 15.86 |
| VIT_17s0000g07540.t01 | Wine grape | nucleus | 9.96 | 12.9 |
| AT1G59890.2 | Thale cress | nucleus | 23.65 | 4.88 |
| AT1G10450.3 | Thale cress | endoplasmic reticulum, plastid | 23.24 | 4.77 |
| AT3G01320.1 | Thale cress | mitochondrion, nucleus | 24.9 | 4.37 |
| AT5G15020.1 | Thale cress | nucleus | 24.07 | 4.24 |
| AT1G70060.2 | Thale cress | nucleus | 23.24 | 4.22 |
| AT1G24190.3 | Thale cress | nucleus | 23.24 | 4.19 |
| AT1G10250.1 | Thale cress | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.1160.11 | MapMan:35.2 | EntrezGene:839615 | ProteinID:AAF99725.1 | ProteinID:AEE30800.1 | ArrayExpress:AT1G27270 |
| EnsemblPlantsGene:AT1G27270 | RefSeq:AT1G27270 | TAIR:AT1G27270 | RefSeq:AT1G27270-TAIR-G | EnsemblPlants:AT1G27270.1 | TAIR:AT1G27270.1 |
| Unigene:At.51787 | GO:GO:0000118 | GO:GO:0000122 | GO:GO:0000785 | GO:GO:0001106 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004407 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005654 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016575 | GO:GO:0016787 | GO:GO:0019538 |
| InterPro:IPR003822 | RefSeq:NP_174046.1 | InterPro:PAH | InterPro:PAH_sf | PFAM:PF02671 | PFscan:PS51477 |
| PANTHER:PTHR12346 | PANTHER:PTHR12346:SF0 | UniProt:Q9FZK9 | SUPFAM:SSF47762 | UniParc:UPI000009F15B | SEG:seg |
Description
F17L21.5 [Source:UniProtKB/TrEMBL;Acc:Q9FZK9]
Coordinates
chr1:+:9472077..9473149
Molecular Weight (calculated)
27105.5 Da
IEP (calculated)
5.380
GRAVY (calculated)
-0.162
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGKSKSPEF NFEDGMAYFD AVKVALQDTE PEKYQEFVRI FIDYTANRFG FETLSASLQE LLRDHANLCH GSNVLLPFRL QTAIPPEASA EFHINKVVGR
101: SVPPAVAVPT MDDATSYLNA VKEAFHDEPA KYMEITKLLT DLKARRINAA SVIARMEELL KDHLNLLLGF CVFLSPTRRF ITKLKARFLG DGSQVVDSVL
201: QILRMHSEGN KSKDEASQEV RALIQGHEDL LMELSEIFSD P
101: SVPPAVAVPT MDDATSYLNA VKEAFHDEPA KYMEITKLLT DLKARRINAA SVIARMEELL KDHLNLLLGF CVFLSPTRRF ITKLKARFLG DGSQVVDSVL
201: QILRMHSEGN KSKDEASQEV RALIQGHEDL LMELSEIFSD P
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.