Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra024839.1-P | |
| Bra024840.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G33210.1 | Bra024839.1-P | AT2G01950.1 | 19000166 |
| AT4G33210.1 | Bra024840.1-P | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45032 | Canola | nucleus | 97.07 | 94.84 |
| Bra011427.1-P | Field mustard | cytosol | 59.39 | 76.67 |
| Bra034551.1-P | Field mustard | cytosol | 78.87 | 75.51 |
| AT4G33210.1 | Thale cress | cytosol | 78.4 | 67.47 |
| Bra037014.1-P | Field mustard | nucleus | 77.58 | 67.04 |
| KRH52245 | Soybean | nucleus | 59.74 | 57.0 |
| Os10t0396400-01 | Rice | mitochondrion | 42.61 | 55.5 |
| KRH61576 | Soybean | nucleus | 56.22 | 53.28 |
| PGSC0003DMT400048411 | Potato | cytosol | 59.51 | 52.81 |
| Solyc08g061820.2.1 | Tomato | cytosol | 59.74 | 51.89 |
| VIT_04s0008g01890.t01 | Wine grape | nucleus | 60.33 | 51.87 |
| KRH05410 | Soybean | cytosol | 59.74 | 51.83 |
| KRH15607 | Soybean | cytosol | 58.92 | 51.49 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, vacuole | 42.84 | 50.76 |
| GSMUA_Achr7P11390_001 | Banana | cytosol | 49.65 | 47.85 |
| OQU91850 | Sorghum | cytosol | 51.88 | 44.6 |
| TraesCS1D01G136800.4 | Wheat | cytosol | 52.46 | 44.0 |
| TraesCS1B01G154100.1 | Wheat | cytosol | 52.11 | 43.7 |
| TraesCS1A01G136200.1 | Wheat | cytosol | 48.59 | 42.95 |
| Zm00001d014232_P014 | Maize | cytosol | 50.0 | 40.49 |
| Zm00001d033037_P008 | Maize | cytosol | 47.54 | 38.42 |
Protein Annotations
| EnsemblPlants:Bra034552.1 | EnsemblPlants:Bra034552.1-P | EnsemblPlantsGene:Bra034552 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| InterPro:Leu-rich_rpt_Cys-con_subtyp | PANTHER:PTHR44842 | SEG:seg | SMART:SM00367 | SUPFAM:SSF52047 | SUPFAM:SSF52058 |
| UniParc:UPI0002546941 | UniProt:M4F0F8 | MapMan:35.1 | : | : | : |
Description
AT4G33210 (E=2e-155) | F-box family protein (FBL15)
Coordinates
chrA08:+:12863368..12867705
Molecular Weight (calculated)
93143.1 Da
IEP (calculated)
6.196
GRAVY (calculated)
0.164
Length
852 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEGELKRVW SSTDAEDDDT YHKRPKLECP ASASSDSSSM EERTVASSSR THTTDMFCQN FILNHGRKDD DSQVHFDLTA DLLHVVFSFL KHVDLCRSAM
101: VCLENMCHRY PNATSVNVYG VPAVNALAMK AATTLRNLET LTIGNGHISE NFFQILGECN SLRSVTISDA VLGSGGPQEI HLSHDRLHKL KIRQCSALRL
201: SIRCPQLRSL SLKRSNMVLA MLHCPLLQHL DIASCHKLQD ADIRSAVTSC PQLESLDVSN SSRLSNETLR EIAQACAALH ILNASYCSNI SFESVHLPML
301: TVLKLRSCER ITSASMTWIA NSPALEVLEL DNCNMLTSLA LHLSCLQSLI LLNCRKFVEL NLQSTMLSSI TIANCPALRR VTITSNALRR LGLKKQENLT
401: TLVLNCQSLQ EVDLSGCKSL SNTVCESFSD VGGCPLLKSL ILDNCESLTE VRFCNSSLSS LSLVGCRAVT SLALKCPRIE EICLDGCDNL ETAFFKPVAL
501: RSLNLEICPK LSVLSIEAPY MVSLDLKCFG GLSEASIICP LLTSLDASFC GQLRDDCLPA ITASCPLIES LVLMSCSSIG SVGFSSLKGL QNLSVLDLSY
601: TCLMNLEPIF KSCIQLKVLK LQACKDLTDS SLEPLYKEGA LPALEELDLS YGTLCRTVIA DLLACCTHLT HLSLNGCVNM HDLEHDWGSG ESNQEPAETS
701: TNRLLQNLSC VGCPNIRKVL IPPAARFNHL SSLNLSLCVN LKEVDLACSN LVLLNLSNCC SLEVLKLGCP RLSTLFLQSC KMDEAEVEAA ISGCGSLETL
801: DLRLCSKISS VSMVRLQTVC PSLKRVFSSP NLLQDQGFAS NVFLYTTLSK LY
101: VCLENMCHRY PNATSVNVYG VPAVNALAMK AATTLRNLET LTIGNGHISE NFFQILGECN SLRSVTISDA VLGSGGPQEI HLSHDRLHKL KIRQCSALRL
201: SIRCPQLRSL SLKRSNMVLA MLHCPLLQHL DIASCHKLQD ADIRSAVTSC PQLESLDVSN SSRLSNETLR EIAQACAALH ILNASYCSNI SFESVHLPML
301: TVLKLRSCER ITSASMTWIA NSPALEVLEL DNCNMLTSLA LHLSCLQSLI LLNCRKFVEL NLQSTMLSSI TIANCPALRR VTITSNALRR LGLKKQENLT
401: TLVLNCQSLQ EVDLSGCKSL SNTVCESFSD VGGCPLLKSL ILDNCESLTE VRFCNSSLSS LSLVGCRAVT SLALKCPRIE EICLDGCDNL ETAFFKPVAL
501: RSLNLEICPK LSVLSIEAPY MVSLDLKCFG GLSEASIICP LLTSLDASFC GQLRDDCLPA ITASCPLIES LVLMSCSSIG SVGFSSLKGL QNLSVLDLSY
601: TCLMNLEPIF KSCIQLKVLK LQACKDLTDS SLEPLYKEGA LPALEELDLS YGTLCRTVIA DLLACCTHLT HLSLNGCVNM HDLEHDWGSG ESNQEPAETS
701: TNRLLQNLSC VGCPNIRKVL IPPAARFNHL SSLNLSLCVN LKEVDLACSN LVLLNLSNCC SLEVLKLGCP RLSTLFLQSC KMDEAEVEAA ISGCGSLETL
801: DLRLCSKISS VSMVRLQTVC PSLKRVFSSP NLLQDQGFAS NVFLYTTLSK LY
001: MRIWCFSCFT DEDEDEEDDN GGRVKKQSLA TAMDNSNGDG DFVNFGENER APRVPRWRLR LCAEESEAAW AELDRFWTSE IPLNQLVQGE SSSNVVAEAE
101: DCTMEEADHD SYHKRAKVYS GLAECRSVSG VSSDAGNSVS SVERTVSFGI ASSSRTDTDM FCQNFILNYN RKDGKKDDGD DNGSSDTEDF EVHIDLTDDL
201: LHMVFSFLNH VDLCRSAMVC RQWRVASAHE DFWRVLNFEN IRISMEQFEN MCSRYPNATE VNVYGAPAVN ALAMKAATTL RNLEVLTIGK GHISESFFQA
301: LGECNMLRSV TVSDAILGNG AQEIHLSHDR LRELKITKCR VMRLSIRCPQ LRSLSLKRSN MSQAMLNCPL LQLLDIASCH KLLDAAIRSA AISCPQLESL
401: DVSNCSCVSD ETLREIAQAC ANLHILNASY CPNISLESVH LPMLTVLKLH SCEGITSASM TWIANSPALE VLELDNCNLL TTVSLHLSRL QSISLVHCRK
501: FTDLNLQSIM LSSITVSNCP ALRRITITSN ALRRLALQKQ ENLTTLVLQC HSLQEVDLSD CESLSNSVCK IFSDDGGCPM LKSLILDNCE SLTAVRFCNS
601: SLASLSLVGC RAVTSLELKC PRIEQICLDG CDHLETAFFQ PVALRSLNLG ICPKLSVLNI EAPYMVSLEL KGCGVLSEAS IMCPLLTSLD ASFCSQLRDD
701: CLSATTASCP LIESLVLMSC PSIGSDGLSS LNGLPNLTVL DLSYTFLMNL EPVFKSCIQL KVLKLQACKY LTDSSLEPLY KEGALPALEE LDLSYGTLCQ
801: TAIDDLLACC THLTHLSLNG CVNMHDLDWG STSVHLFDYF GVYSSSDNTQ EPAETANRLL QNLNCVGCPN IRKVLIPPAA RFYHLSTLNL SLSVNLKEVD
901: LTCSNLVLLN LSNCCSLEVL KLGCPRLASL FLQSCNMDEA GVEAAISGCS SLETLDLRFC PKISSVSMSK FRTVCPSLKR VFSSPNLLQD
101: DCTMEEADHD SYHKRAKVYS GLAECRSVSG VSSDAGNSVS SVERTVSFGI ASSSRTDTDM FCQNFILNYN RKDGKKDDGD DNGSSDTEDF EVHIDLTDDL
201: LHMVFSFLNH VDLCRSAMVC RQWRVASAHE DFWRVLNFEN IRISMEQFEN MCSRYPNATE VNVYGAPAVN ALAMKAATTL RNLEVLTIGK GHISESFFQA
301: LGECNMLRSV TVSDAILGNG AQEIHLSHDR LRELKITKCR VMRLSIRCPQ LRSLSLKRSN MSQAMLNCPL LQLLDIASCH KLLDAAIRSA AISCPQLESL
401: DVSNCSCVSD ETLREIAQAC ANLHILNASY CPNISLESVH LPMLTVLKLH SCEGITSASM TWIANSPALE VLELDNCNLL TTVSLHLSRL QSISLVHCRK
501: FTDLNLQSIM LSSITVSNCP ALRRITITSN ALRRLALQKQ ENLTTLVLQC HSLQEVDLSD CESLSNSVCK IFSDDGGCPM LKSLILDNCE SLTAVRFCNS
601: SLASLSLVGC RAVTSLELKC PRIEQICLDG CDHLETAFFQ PVALRSLNLG ICPKLSVLNI EAPYMVSLEL KGCGVLSEAS IMCPLLTSLD ASFCSQLRDD
701: CLSATTASCP LIESLVLMSC PSIGSDGLSS LNGLPNLTVL DLSYTFLMNL EPVFKSCIQL KVLKLQACKY LTDSSLEPLY KEGALPALEE LDLSYGTLCQ
801: TAIDDLLACC THLTHLSLNG CVNMHDLDWG STSVHLFDYF GVYSSSDNTQ EPAETANRLL QNLNCVGCPN IRKVLIPPAA RFYHLSTLNL SLSVNLKEVD
901: LTCSNLVLLN LSNCCSLEVL KLGCPRLASL FLQSCNMDEA GVEAAISGCS SLETLDLRFC PKISSVSMSK FRTVCPSLKR VFSSPNLLQD
Arabidopsis Description
FBL15SLOMO [Source:UniProtKB/TrEMBL;Acc:A0A178V148]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.