Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra024839.1-P | |
| Bra024840.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G33210.1 | Bra024839.1-P | AT2G01950.1 | 19000166 |
| AT4G33210.1 | Bra024840.1-P | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46126 | Canola | cytosol | 97.77 | 98.27 |
| Bra011427.1-P | Field mustard | cytosol | 61.26 | 91.52 |
| AT4G33210.1 | Thale cress | cytosol | 85.8 | 85.45 |
| Bra034552.1-P | Field mustard | nucleus | 67.04 | 77.58 |
| Bra034551.1-P | Field mustard | cytosol | 67.14 | 74.38 |
| KRH52245 | Soybean | nucleus | 59.43 | 65.62 |
| KRH61576 | Soybean | nucleus | 56.69 | 62.18 |
| VIT_04s0008g01890.t01 | Wine grape | nucleus | 62.17 | 61.86 |
| KRH15607 | Soybean | cytosol | 60.45 | 61.13 |
| PGSC0003DMT400048411 | Potato | cytosol | 59.43 | 61.04 |
| Solyc08g061820.2.1 | Tomato | cytosol | 60.65 | 60.96 |
| KRH05410 | Soybean | cytosol | 60.34 | 60.59 |
| Os10t0396400-01 | Rice | mitochondrion | 40.06 | 60.4 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, vacuole | 39.45 | 54.1 |
| GSMUA_Achr7P11390_001 | Banana | cytosol | 47.67 | 53.17 |
| OQU91850 | Sorghum | cytosol | 50.71 | 50.45 |
| TraesCS1B01G154100.1 | Wheat | cytosol | 51.22 | 49.7 |
| TraesCS1D01G136800.4 | Wheat | cytosol | 51.12 | 49.61 |
| TraesCS1A01G136200.1 | Wheat | cytosol | 48.38 | 49.48 |
| Zm00001d014232_P014 | Maize | cytosol | 48.38 | 45.34 |
| Zm00001d033037_P008 | Maize | cytosol | 46.45 | 43.45 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | EnsemblPlantsGene:Bra037014 | EnsemblPlants:Bra037014.1 | EnsemblPlants:Bra037014.1-P | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001810 | InterPro:IPR032675 |
| InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt_Cys-con_subtyp | UniProt:M4F7F4 | PFAM:PF12937 | PFscan:PS50181 | PANTHER:PTHR44842 |
| SMART:SM00256 | SMART:SM00367 | SUPFAM:SSF52047 | SUPFAM:SSF52058 | SUPFAM:SSF81383 | UniParc:UPI00025410DD |
| SEG:seg | : | : | : | : | : |
Description
AT4G33210 (E=0.0) | F-box family protein (FBL15)
Coordinates
chrA03:-:28960679..28965457
Molecular Weight (calculated)
108453.0 Da
IEP (calculated)
4.594
GRAVY (calculated)
0.039
Length
986 amino acids
Sequence
(BLAST)
(BLAST)
001: MRIWCFDCFT DDEEEGRLKQ SAMDNNNNNN DDVDLDLNER ELGVCEDERW PLCEEMMLAT TEEDGAELEQ LWSSEIRSHP HLLLQGESSN AAAAPAAVGE
101: DCTMEEADHD SYHKRAKVYS GLTEARSASG VSSDAGSSVE RTVSFGVASS SQTDADMFCQ NFILNYSRKD GKKDEGDDNG SSESEDFELH IDLTDDLLHM
201: VFSFLNHIDL CRSAMVCRQW RVASSHEDFW KALNFENIRI SIEQFEDMCL RYPNATEVNV YGTPSVNALA MKAATTLRNL EVLTVGKGHI SENFFQALGE
301: CNMLRSVTVN EAILGNGAQE IHLSHDRLRE LKITKCRVMR LSIRCPQLRS LSLKRSNMSQ AMLNCPLLQL LDIASCHKLL DAAIRSAAIS CPQLESLDVS
401: NCSCVSDETL REIAQACAGL HILNASYCPN ISLESVHLPM LTVLKLHSCE GITSASMTWI ANSPALEVLE LDNCNLLTSV VLHLSHLQSI SLVHCRKFTE
501: LNLQSVMLSS ITVSNCPALR RITITSNSLR RLALQKQENL TTLVLQCQFL QEVDLSDCES LSNAVCEIFS DDGGCPMLKS LILDNCESLT EVRFRNSSLG
601: SLSLVGCRAV TSLELKCPRI EQICLDGCDH LETAFFQPVA LRSLNLGICP KLSVLNIEAP YMVSLELKGC GVLSEASIIC PLLTSLDASF CGQLRDDCLS
701: ATTASCPLIE SLVLMSCPSI GSDGLSSLNG IPNLTVLDLS YTFLMNLEPV FKSCIRLKVL KLQACKYLTD TSLEPLYKEG ALPALEELDL SYGTLCQTAI
801: DDLLACCTHL THLSLNGCVN MHDLDWGSTN VQPFDYFGVY SSGEITQEPA EAGNRLLQNL NCVGCPNIRK VFIPPAARFY HLSTLNLSLS VNLKEVDLAC
901: SNLVLLNLSN CCSLEVLKLG CPRLASLFLQ SCNMDEAGVE AAISRCCSLE TLDLRFCSKI SSVSMARFRA VCPSLKRVFS SPNLAD
101: DCTMEEADHD SYHKRAKVYS GLTEARSASG VSSDAGSSVE RTVSFGVASS SQTDADMFCQ NFILNYSRKD GKKDEGDDNG SSESEDFELH IDLTDDLLHM
201: VFSFLNHIDL CRSAMVCRQW RVASSHEDFW KALNFENIRI SIEQFEDMCL RYPNATEVNV YGTPSVNALA MKAATTLRNL EVLTVGKGHI SENFFQALGE
301: CNMLRSVTVN EAILGNGAQE IHLSHDRLRE LKITKCRVMR LSIRCPQLRS LSLKRSNMSQ AMLNCPLLQL LDIASCHKLL DAAIRSAAIS CPQLESLDVS
401: NCSCVSDETL REIAQACAGL HILNASYCPN ISLESVHLPM LTVLKLHSCE GITSASMTWI ANSPALEVLE LDNCNLLTSV VLHLSHLQSI SLVHCRKFTE
501: LNLQSVMLSS ITVSNCPALR RITITSNSLR RLALQKQENL TTLVLQCQFL QEVDLSDCES LSNAVCEIFS DDGGCPMLKS LILDNCESLT EVRFRNSSLG
601: SLSLVGCRAV TSLELKCPRI EQICLDGCDH LETAFFQPVA LRSLNLGICP KLSVLNIEAP YMVSLELKGC GVLSEASIIC PLLTSLDASF CGQLRDDCLS
701: ATTASCPLIE SLVLMSCPSI GSDGLSSLNG IPNLTVLDLS YTFLMNLEPV FKSCIRLKVL KLQACKYLTD TSLEPLYKEG ALPALEELDL SYGTLCQTAI
801: DDLLACCTHL THLSLNGCVN MHDLDWGSTN VQPFDYFGVY SSGEITQEPA EAGNRLLQNL NCVGCPNIRK VFIPPAARFY HLSTLNLSLS VNLKEVDLAC
901: SNLVLLNLSN CCSLEVLKLG CPRLASLFLQ SCNMDEAGVE AAISRCCSLE TLDLRFCSKI SSVSMARFRA VCPSLKRVFS SPNLAD
001: MRIWCFSCFT DEDEDEEDDN GGRVKKQSLA TAMDNSNGDG DFVNFGENER APRVPRWRLR LCAEESEAAW AELDRFWTSE IPLNQLVQGE SSSNVVAEAE
101: DCTMEEADHD SYHKRAKVYS GLAECRSVSG VSSDAGNSVS SVERTVSFGI ASSSRTDTDM FCQNFILNYN RKDGKKDDGD DNGSSDTEDF EVHIDLTDDL
201: LHMVFSFLNH VDLCRSAMVC RQWRVASAHE DFWRVLNFEN IRISMEQFEN MCSRYPNATE VNVYGAPAVN ALAMKAATTL RNLEVLTIGK GHISESFFQA
301: LGECNMLRSV TVSDAILGNG AQEIHLSHDR LRELKITKCR VMRLSIRCPQ LRSLSLKRSN MSQAMLNCPL LQLLDIASCH KLLDAAIRSA AISCPQLESL
401: DVSNCSCVSD ETLREIAQAC ANLHILNASY CPNISLESVH LPMLTVLKLH SCEGITSASM TWIANSPALE VLELDNCNLL TTVSLHLSRL QSISLVHCRK
501: FTDLNLQSIM LSSITVSNCP ALRRITITSN ALRRLALQKQ ENLTTLVLQC HSLQEVDLSD CESLSNSVCK IFSDDGGCPM LKSLILDNCE SLTAVRFCNS
601: SLASLSLVGC RAVTSLELKC PRIEQICLDG CDHLETAFFQ PVALRSLNLG ICPKLSVLNI EAPYMVSLEL KGCGVLSEAS IMCPLLTSLD ASFCSQLRDD
701: CLSATTASCP LIESLVLMSC PSIGSDGLSS LNGLPNLTVL DLSYTFLMNL EPVFKSCIQL KVLKLQACKY LTDSSLEPLY KEGALPALEE LDLSYGTLCQ
801: TAIDDLLACC THLTHLSLNG CVNMHDLDWG STSVHLFDYF GVYSSSDNTQ EPAETANRLL QNLNCVGCPN IRKVLIPPAA RFYHLSTLNL SLSVNLKEVD
901: LTCSNLVLLN LSNCCSLEVL KLGCPRLASL FLQSCNMDEA GVEAAISGCS SLETLDLRFC PKISSVSMSK FRTVCPSLKR VFSSPNLLQD
101: DCTMEEADHD SYHKRAKVYS GLAECRSVSG VSSDAGNSVS SVERTVSFGI ASSSRTDTDM FCQNFILNYN RKDGKKDDGD DNGSSDTEDF EVHIDLTDDL
201: LHMVFSFLNH VDLCRSAMVC RQWRVASAHE DFWRVLNFEN IRISMEQFEN MCSRYPNATE VNVYGAPAVN ALAMKAATTL RNLEVLTIGK GHISESFFQA
301: LGECNMLRSV TVSDAILGNG AQEIHLSHDR LRELKITKCR VMRLSIRCPQ LRSLSLKRSN MSQAMLNCPL LQLLDIASCH KLLDAAIRSA AISCPQLESL
401: DVSNCSCVSD ETLREIAQAC ANLHILNASY CPNISLESVH LPMLTVLKLH SCEGITSASM TWIANSPALE VLELDNCNLL TTVSLHLSRL QSISLVHCRK
501: FTDLNLQSIM LSSITVSNCP ALRRITITSN ALRRLALQKQ ENLTTLVLQC HSLQEVDLSD CESLSNSVCK IFSDDGGCPM LKSLILDNCE SLTAVRFCNS
601: SLASLSLVGC RAVTSLELKC PRIEQICLDG CDHLETAFFQ PVALRSLNLG ICPKLSVLNI EAPYMVSLEL KGCGVLSEAS IMCPLLTSLD ASFCSQLRDD
701: CLSATTASCP LIESLVLMSC PSIGSDGLSS LNGLPNLTVL DLSYTFLMNL EPVFKSCIQL KVLKLQACKY LTDSSLEPLY KEGALPALEE LDLSYGTLCQ
801: TAIDDLLACC THLTHLSLNG CVNMHDLDWG STSVHLFDYF GVYSSSDNTQ EPAETANRLL QNLNCVGCPN IRKVLIPPAA RFYHLSTLNL SLSVNLKEVD
901: LTCSNLVLLN LSNCCSLEVL KLGCPRLASL FLQSCNMDEA GVEAAISGCS SLETLDLRFC PKISSVSMSK FRTVCPSLKR VFSSPNLLQD
Arabidopsis Description
FBL15SLOMO [Source:UniProtKB/TrEMBL;Acc:A0A178V148]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.