Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G33210.1 | KRH42483 | AT2G01950.1 | 19000166 |
| AT4G33210.1 | KRH58580 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH52245 | Soybean | nucleus | 88.77 | 89.36 |
| KRH15607 | Soybean | cytosol | 75.97 | 70.05 |
| KRH05410 | Soybean | cytosol | 74.3 | 68.02 |
| Bra011427.1-P | Field mustard | cytosol | 46.72 | 63.64 |
| VIT_04s0008g01890.t01 | Wine grape | nucleus | 68.08 | 61.76 |
| PGSC0003DMT400048411 | Potato | cytosol | 64.74 | 60.62 |
| Os10t0396400-01 | Rice | mitochondrion | 43.49 | 59.79 |
| Solyc08g061820.2.1 | Tomato | cytosol | 64.63 | 59.23 |
| CDX75339 | Canola | cytosol | 62.18 | 57.81 |
| CDX68956 | Canola | cytosol | 62.18 | 57.22 |
| Bra037014.1-P | Field mustard | nucleus | 62.18 | 56.69 |
| CDY46126 | Canola | cytosol | 61.74 | 56.57 |
| AT4G33210.1 | Thale cress | cytosol | 62.18 | 56.46 |
| CDY28286 | Canola | nucleus | 54.95 | 56.46 |
| Bra034552.1-P | Field mustard | nucleus | 53.28 | 56.22 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, vacuole | 44.27 | 55.35 |
| CDY45032 | Canola | nucleus | 53.39 | 55.05 |
| CDY28285 | Canola | cytosol | 54.51 | 54.93 |
| GSMUA_Achr7P11390_001 | Banana | cytosol | 53.73 | 54.64 |
| CDY45031 | Canola | cytosol | 53.73 | 54.27 |
| Bra034551.1-P | Field mustard | cytosol | 53.62 | 54.16 |
| OQU91850 | Sorghum | cytosol | 53.39 | 48.44 |
| TraesCS1A01G136200.1 | Wheat | cytosol | 51.28 | 47.82 |
| TraesCS1D01G136800.4 | Wheat | cytosol | 53.62 | 47.44 |
| TraesCS1B01G154100.1 | Wheat | cytosol | 53.39 | 47.24 |
| Zm00001d014232_P014 | Maize | cytosol | 51.39 | 43.92 |
| Zm00001d033037_P008 | Maize | cytosol | 49.5 | 42.22 |
Protein Annotations
| EntrezGene:100803643 | Gene3D:3.80.10.10 | MapMan:35.1 | EMBL:ACUP02002172 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom |
| EnsemblPlantsGene:GLYMA_04G055700 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | UniProt:I1JU10 | InterPro:IPR001810 |
| InterPro:IPR032675 | EnsemblPlants:KRH61576 | ProteinID:KRH61576 | ProteinID:KRH61576.1 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt_Cys-con_subtyp |
| PFAM:PF12937 | PFscan:PS50181 | PANTHER:PTHR44842 | SMART:SM00256 | SMART:SM00367 | SUPFAM:SSF52058 |
| SUPFAM:SSF81383 | UniParc:UPI00023C039F | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:4502162..4508028
Molecular Weight (calculated)
99109.9 Da
IEP (calculated)
5.024
GRAVY (calculated)
0.146
Length
899 amino acids
Sequence
(BLAST)
(BLAST)
001: MERNRRRSDG ESSSVSAEDT RRKRARVYFD FDGPHCIVKC SNAGKSSASV DEFVDYDNFQ RSSLRSNDDD ALRSMSAGEE SNFDEGDDSD ISKVDDLEVK
101: MDLTDDLLHM VFSFLDHPNL CKAARVCKQW WTASAHEVFW KSLNFEDRSI SVEQFEDICR RYPNIMAIRM SGPACNQLVM KAISSLRNLE ALTLGRAHIM
201: DNFFHALADC SMLKRLTIND AILGSGIQEI SVNHDRLCHL QLTKCRVMRI AVRCPQLETM SLKRSNMAQT ALNCPLLQEL DIGSCHKLPD SAIRSAVTSC
301: SQLVSLDMSN CSSVSDETLR EISMNCANLS FLDASYCPNL FLETVRLPML TVLKLHSCDG ITAASMAAIS HSYMLEVLEL DNCSLLTSVS LDLPRLQNIR
401: LVHCRKFADL NLMTLTLSSI LVSNCPVLHR INITSNSLQK LTIPKQDSLT TLALQCQSLQ EVDLSECESL NNSVCNVFND GGGCPMLKSL VLGNCESLTS
501: VQFISTSLIS LSLGGCRAIT NLELTCPNLE KVILDGCDHL ERASFCPVGL LSLNLGICPK LNTLSIEAPF MVSLELKGCG VLSEAFINCP LLASLDASFC
601: SQLTDGCLSA TTVSCPLIES LILMSCSSIG SEGLRSLYCL PNLTVLDLSY TFLVNMQPVF DSCLQLKVLK LQACKYLTET SLEPLYKGGA LPALQELDLS
701: YGTLCQSAID ELLACCTNLT HVSLNGCVNM HDLNWGSSRG QSDNFPAVNT PSWASSNEII SESSEHSARL LQNLYCVGCP NIRKVVIPLR ENCFHLLFLN
801: LSLSANLKVV DVTCLNLCFL NLSNCSSLEI LKLECPKLTS LFLQSCNIDD EAVEAAISKC TMLETLDVRF CPKVREQTQF VIFLHHFACC LGLLSILTI
101: MDLTDDLLHM VFSFLDHPNL CKAARVCKQW WTASAHEVFW KSLNFEDRSI SVEQFEDICR RYPNIMAIRM SGPACNQLVM KAISSLRNLE ALTLGRAHIM
201: DNFFHALADC SMLKRLTIND AILGSGIQEI SVNHDRLCHL QLTKCRVMRI AVRCPQLETM SLKRSNMAQT ALNCPLLQEL DIGSCHKLPD SAIRSAVTSC
301: SQLVSLDMSN CSSVSDETLR EISMNCANLS FLDASYCPNL FLETVRLPML TVLKLHSCDG ITAASMAAIS HSYMLEVLEL DNCSLLTSVS LDLPRLQNIR
401: LVHCRKFADL NLMTLTLSSI LVSNCPVLHR INITSNSLQK LTIPKQDSLT TLALQCQSLQ EVDLSECESL NNSVCNVFND GGGCPMLKSL VLGNCESLTS
501: VQFISTSLIS LSLGGCRAIT NLELTCPNLE KVILDGCDHL ERASFCPVGL LSLNLGICPK LNTLSIEAPF MVSLELKGCG VLSEAFINCP LLASLDASFC
601: SQLTDGCLSA TTVSCPLIES LILMSCSSIG SEGLRSLYCL PNLTVLDLSY TFLVNMQPVF DSCLQLKVLK LQACKYLTET SLEPLYKGGA LPALQELDLS
701: YGTLCQSAID ELLACCTNLT HVSLNGCVNM HDLNWGSSRG QSDNFPAVNT PSWASSNEII SESSEHSARL LQNLYCVGCP NIRKVVIPLR ENCFHLLFLN
801: LSLSANLKVV DVTCLNLCFL NLSNCSSLEI LKLECPKLTS LFLQSCNIDD EAVEAAISKC TMLETLDVRF CPKVREQTQF VIFLHHFACC LGLLSILTI
001: MRIWCFSCFT DEDEDEEDDN GGRVKKQSLA TAMDNSNGDG DFVNFGENER APRVPRWRLR LCAEESEAAW AELDRFWTSE IPLNQLVQGE SSSNVVAEAE
101: DCTMEEADHD SYHKRAKVYS GLAECRSVSG VSSDAGNSVS SVERTVSFGI ASSSRTDTDM FCQNFILNYN RKDGKKDDGD DNGSSDTEDF EVHIDLTDDL
201: LHMVFSFLNH VDLCRSAMVC RQWRVASAHE DFWRVLNFEN IRISMEQFEN MCSRYPNATE VNVYGAPAVN ALAMKAATTL RNLEVLTIGK GHISESFFQA
301: LGECNMLRSV TVSDAILGNG AQEIHLSHDR LRELKITKCR VMRLSIRCPQ LRSLSLKRSN MSQAMLNCPL LQLLDIASCH KLLDAAIRSA AISCPQLESL
401: DVSNCSCVSD ETLREIAQAC ANLHILNASY CPNISLESVH LPMLTVLKLH SCEGITSASM TWIANSPALE VLELDNCNLL TTVSLHLSRL QSISLVHCRK
501: FTDLNLQSIM LSSITVSNCP ALRRITITSN ALRRLALQKQ ENLTTLVLQC HSLQEVDLSD CESLSNSVCK IFSDDGGCPM LKSLILDNCE SLTAVRFCNS
601: SLASLSLVGC RAVTSLELKC PRIEQICLDG CDHLETAFFQ PVALRSLNLG ICPKLSVLNI EAPYMVSLEL KGCGVLSEAS IMCPLLTSLD ASFCSQLRDD
701: CLSATTASCP LIESLVLMSC PSIGSDGLSS LNGLPNLTVL DLSYTFLMNL EPVFKSCIQL KVLKLQACKY LTDSSLEPLY KEGALPALEE LDLSYGTLCQ
801: TAIDDLLACC THLTHLSLNG CVNMHDLDWG STSVHLFDYF GVYSSSDNTQ EPAETANRLL QNLNCVGCPN IRKVLIPPAA RFYHLSTLNL SLSVNLKEVD
901: LTCSNLVLLN LSNCCSLEVL KLGCPRLASL FLQSCNMDEA GVEAAISGCS SLETLDLRFC PKISSVSMSK FRTVCPSLKR VFSSPNLLQD
101: DCTMEEADHD SYHKRAKVYS GLAECRSVSG VSSDAGNSVS SVERTVSFGI ASSSRTDTDM FCQNFILNYN RKDGKKDDGD DNGSSDTEDF EVHIDLTDDL
201: LHMVFSFLNH VDLCRSAMVC RQWRVASAHE DFWRVLNFEN IRISMEQFEN MCSRYPNATE VNVYGAPAVN ALAMKAATTL RNLEVLTIGK GHISESFFQA
301: LGECNMLRSV TVSDAILGNG AQEIHLSHDR LRELKITKCR VMRLSIRCPQ LRSLSLKRSN MSQAMLNCPL LQLLDIASCH KLLDAAIRSA AISCPQLESL
401: DVSNCSCVSD ETLREIAQAC ANLHILNASY CPNISLESVH LPMLTVLKLH SCEGITSASM TWIANSPALE VLELDNCNLL TTVSLHLSRL QSISLVHCRK
501: FTDLNLQSIM LSSITVSNCP ALRRITITSN ALRRLALQKQ ENLTTLVLQC HSLQEVDLSD CESLSNSVCK IFSDDGGCPM LKSLILDNCE SLTAVRFCNS
601: SLASLSLVGC RAVTSLELKC PRIEQICLDG CDHLETAFFQ PVALRSLNLG ICPKLSVLNI EAPYMVSLEL KGCGVLSEAS IMCPLLTSLD ASFCSQLRDD
701: CLSATTASCP LIESLVLMSC PSIGSDGLSS LNGLPNLTVL DLSYTFLMNL EPVFKSCIQL KVLKLQACKY LTDSSLEPLY KEGALPALEE LDLSYGTLCQ
801: TAIDDLLACC THLTHLSLNG CVNMHDLDWG STSVHLFDYF GVYSSSDNTQ EPAETANRLL QNLNCVGCPN IRKVLIPPAA RFYHLSTLNL SLSVNLKEVD
901: LTCSNLVLLN LSNCCSLEVL KLGCPRLASL FLQSCNMDEA GVEAAISGCS SLETLDLRFC PKISSVSMSK FRTVCPSLKR VFSSPNLLQD
Arabidopsis Description
FBL15SLOMO [Source:UniProtKB/TrEMBL;Acc:A0A178V148]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.