Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS3A01G099400.1 | |
| TraesCS3B01G115800.1 | |
| TraesCS3D01G099700.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G33210.1 | TraesCS3A01G099400.1 | AT2G01950.1 | 19000166 |
| AT4G33210.1 | TraesCS3B01G115800.1 | AT2G01950.1 | 19000166 |
| AT4G33210.1 | TraesCS3D01G099700.1 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G136800.4 | Wheat | cytosol | 98.72 | 98.72 |
| TraesCS1A01G136200.1 | Wheat | cytosol | 93.01 | 98.03 |
| Os10t0396400-01 | Rice | mitochondrion | 54.23 | 84.25 |
| OQU91850 | Sorghum | cytosol | 76.77 | 78.71 |
| Zm00001d014232_P014 | Maize | cytosol | 71.36 | 68.92 |
| Zm00001d033037_P008 | Maize | cytosol | 70.96 | 68.41 |
| GSMUA_Achr7P11390_001 | Banana | cytosol | 56.2 | 64.59 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, vacuole | 44.39 | 62.73 |
| Bra011427.1-P | Field mustard | cytosol | 37.7 | 58.03 |
| KRH52245 | Soybean | nucleus | 48.92 | 55.66 |
| KRH61576 | Soybean | nucleus | 47.24 | 53.39 |
| PGSC0003DMT400048411 | Potato | cytosol | 50.0 | 52.92 |
| VIT_04s0008g01890.t01 | Wine grape | nucleus | 51.57 | 52.88 |
| CDY28286 | Canola | nucleus | 45.37 | 52.69 |
| KRH15607 | Soybean | cytosol | 50.3 | 52.41 |
| CDY45031 | Canola | cytosol | 45.77 | 52.25 |
| Bra034552.1-P | Field mustard | nucleus | 43.7 | 52.11 |
| KRH05410 | Soybean | cytosol | 50.3 | 52.04 |
| Bra034551.1-P | Field mustard | cytosol | 45.57 | 52.02 |
| CDY28285 | Canola | cytosol | 45.67 | 52.02 |
| Solyc08g061820.2.1 | Tomato | cytosol | 50.1 | 51.89 |
| CDX75339 | Canola | cytosol | 49.31 | 51.81 |
| AT4G33210.1 | Thale cress | cytosol | 50.1 | 51.41 |
| CDY46126 | Canola | cytosol | 49.51 | 51.27 |
| Bra037014.1-P | Field mustard | nucleus | 49.7 | 51.22 |
| CDX68956 | Canola | cytosol | 49.11 | 51.07 |
| CDY45032 | Canola | nucleus | 43.41 | 50.57 |
Protein Annotations
| Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 | MapMan:35.1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0010252 | GO:GO:1905393 |
| InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt_Cys-con_subtyp | PFAM:PF12937 | PANTHER:PTHR44842 |
| SMART:SM00256 | SMART:SM00367 | SUPFAM:SSF52047 | SUPFAM:SSF52058 | SUPFAM:SSF81383 | EnsemblPlantsGene:TraesCS1B01G154100 |
| EnsemblPlants:TraesCS1B01G154100.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1B:-:255494873..255511161
Molecular Weight (calculated)
110306.0 Da
IEP (calculated)
4.778
GRAVY (calculated)
0.023
Length
1016 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADGGKMKGV EGSGEGTGHG EDMDEEAREE LELALSLGRR GWHLPPVPVP PPAPALRWSM VFPAWDPDAA GSSRAAESVW DSPPVPPLRF RDMWGGGGAD
0101: ADAGGAGEAE EHNNVEEEEG SEDGDRDLQN KRPKVGAFGE ESSGVNASFF GYEAPHLHAF AEHDHLKLSH GPENELDFGL SLISNDGGND IPRETNSHGV
0201: CDVERSGGTN AEDLEIRMDL SDDLLHLIFS FLCQKDLCRA GAACKQWQSA SMHEDFWKYL KFENTRISLQ NFVNICHRYQ NVTNLNLSGV LSAESLVIEA
0301: ITFLRHLKTL IMGKGQLGET FFQALAECPL LNTLTVSDAS LGSGIQEVTV NHDGLRELQI VKCRALRVSI RCHQLRILSL RRTGMAHVSL NCPQLLELDF
0401: QSCHKLSDTA IRQAATACPL LASLDMSSCS CVTDETLREI ANACQNLSVL DASNCPNISF ESVKLPMLVD LRLSSCEGIT SASMGAVCFS RILEALQLDN
0501: CSLLTSVSLD LPHLKNISLV HLRKFADLNL RSPVLSYIKV SRCSALRCVT ITSNALKKLV LQKQESLCNL SLQCHNLIDV DLSDCESLTN EICKVFSDGG
0601: GCPMLRSLIL DNCESLSVVE LNNSSLVNLS LAGCRSMTFL KLACPKLQVV ILDGCDHLER ASFCPVGLES LNLGICPKLS VLRIEAPNMS ILELKGCGVL
0701: SEASINCPCL ISLDASFCRQ LMDDSLSQTA EACPLIEHLI LSSCLSIDVR GLSSLHCLQK LALLDLSYTF LMNLKPVFDS CLQLKVXXXS ACKYLSDSSL
0801: EPLYREGALP MLVELDLSYS SIGQTAIEEL LACCTNLVNV NLNGCTNLHE LVCGSDYCRS GDMPVDAFPP DSAPDKTKEI RESSNCQLEV LNCTGCPNIK
0901: KVVIPSTANY LNLSKINLNL SANLKEVDLK CSNLYNLNLS NCNSLEILKL DCPRLANLQL LACTMLQEDE LKSALSFCGA LEILNVHSCP QINTLDFGRL
1001: QAVCPTLKRI QSSLIA
0101: ADAGGAGEAE EHNNVEEEEG SEDGDRDLQN KRPKVGAFGE ESSGVNASFF GYEAPHLHAF AEHDHLKLSH GPENELDFGL SLISNDGGND IPRETNSHGV
0201: CDVERSGGTN AEDLEIRMDL SDDLLHLIFS FLCQKDLCRA GAACKQWQSA SMHEDFWKYL KFENTRISLQ NFVNICHRYQ NVTNLNLSGV LSAESLVIEA
0301: ITFLRHLKTL IMGKGQLGET FFQALAECPL LNTLTVSDAS LGSGIQEVTV NHDGLRELQI VKCRALRVSI RCHQLRILSL RRTGMAHVSL NCPQLLELDF
0401: QSCHKLSDTA IRQAATACPL LASLDMSSCS CVTDETLREI ANACQNLSVL DASNCPNISF ESVKLPMLVD LRLSSCEGIT SASMGAVCFS RILEALQLDN
0501: CSLLTSVSLD LPHLKNISLV HLRKFADLNL RSPVLSYIKV SRCSALRCVT ITSNALKKLV LQKQESLCNL SLQCHNLIDV DLSDCESLTN EICKVFSDGG
0601: GCPMLRSLIL DNCESLSVVE LNNSSLVNLS LAGCRSMTFL KLACPKLQVV ILDGCDHLER ASFCPVGLES LNLGICPKLS VLRIEAPNMS ILELKGCGVL
0701: SEASINCPCL ISLDASFCRQ LMDDSLSQTA EACPLIEHLI LSSCLSIDVR GLSSLHCLQK LALLDLSYTF LMNLKPVFDS CLQLKVXXXS ACKYLSDSSL
0801: EPLYREGALP MLVELDLSYS SIGQTAIEEL LACCTNLVNV NLNGCTNLHE LVCGSDYCRS GDMPVDAFPP DSAPDKTKEI RESSNCQLEV LNCTGCPNIK
0901: KVVIPSTANY LNLSKINLNL SANLKEVDLK CSNLYNLNLS NCNSLEILKL DCPRLANLQL LACTMLQEDE LKSALSFCGA LEILNVHSCP QINTLDFGRL
1001: QAVCPTLKRI QSSLIA
001: MRIWCFSCFT DEDEDEEDDN GGRVKKQSLA TAMDNSNGDG DFVNFGENER APRVPRWRLR LCAEESEAAW AELDRFWTSE IPLNQLVQGE SSSNVVAEAE
101: DCTMEEADHD SYHKRAKVYS GLAECRSVSG VSSDAGNSVS SVERTVSFGI ASSSRTDTDM FCQNFILNYN RKDGKKDDGD DNGSSDTEDF EVHIDLTDDL
201: LHMVFSFLNH VDLCRSAMVC RQWRVASAHE DFWRVLNFEN IRISMEQFEN MCSRYPNATE VNVYGAPAVN ALAMKAATTL RNLEVLTIGK GHISESFFQA
301: LGECNMLRSV TVSDAILGNG AQEIHLSHDR LRELKITKCR VMRLSIRCPQ LRSLSLKRSN MSQAMLNCPL LQLLDIASCH KLLDAAIRSA AISCPQLESL
401: DVSNCSCVSD ETLREIAQAC ANLHILNASY CPNISLESVH LPMLTVLKLH SCEGITSASM TWIANSPALE VLELDNCNLL TTVSLHLSRL QSISLVHCRK
501: FTDLNLQSIM LSSITVSNCP ALRRITITSN ALRRLALQKQ ENLTTLVLQC HSLQEVDLSD CESLSNSVCK IFSDDGGCPM LKSLILDNCE SLTAVRFCNS
601: SLASLSLVGC RAVTSLELKC PRIEQICLDG CDHLETAFFQ PVALRSLNLG ICPKLSVLNI EAPYMVSLEL KGCGVLSEAS IMCPLLTSLD ASFCSQLRDD
701: CLSATTASCP LIESLVLMSC PSIGSDGLSS LNGLPNLTVL DLSYTFLMNL EPVFKSCIQL KVLKLQACKY LTDSSLEPLY KEGALPALEE LDLSYGTLCQ
801: TAIDDLLACC THLTHLSLNG CVNMHDLDWG STSVHLFDYF GVYSSSDNTQ EPAETANRLL QNLNCVGCPN IRKVLIPPAA RFYHLSTLNL SLSVNLKEVD
901: LTCSNLVLLN LSNCCSLEVL KLGCPRLASL FLQSCNMDEA GVEAAISGCS SLETLDLRFC PKISSVSMSK FRTVCPSLKR VFSSPNLLQD
101: DCTMEEADHD SYHKRAKVYS GLAECRSVSG VSSDAGNSVS SVERTVSFGI ASSSRTDTDM FCQNFILNYN RKDGKKDDGD DNGSSDTEDF EVHIDLTDDL
201: LHMVFSFLNH VDLCRSAMVC RQWRVASAHE DFWRVLNFEN IRISMEQFEN MCSRYPNATE VNVYGAPAVN ALAMKAATTL RNLEVLTIGK GHISESFFQA
301: LGECNMLRSV TVSDAILGNG AQEIHLSHDR LRELKITKCR VMRLSIRCPQ LRSLSLKRSN MSQAMLNCPL LQLLDIASCH KLLDAAIRSA AISCPQLESL
401: DVSNCSCVSD ETLREIAQAC ANLHILNASY CPNISLESVH LPMLTVLKLH SCEGITSASM TWIANSPALE VLELDNCNLL TTVSLHLSRL QSISLVHCRK
501: FTDLNLQSIM LSSITVSNCP ALRRITITSN ALRRLALQKQ ENLTTLVLQC HSLQEVDLSD CESLSNSVCK IFSDDGGCPM LKSLILDNCE SLTAVRFCNS
601: SLASLSLVGC RAVTSLELKC PRIEQICLDG CDHLETAFFQ PVALRSLNLG ICPKLSVLNI EAPYMVSLEL KGCGVLSEAS IMCPLLTSLD ASFCSQLRDD
701: CLSATTASCP LIESLVLMSC PSIGSDGLSS LNGLPNLTVL DLSYTFLMNL EPVFKSCIQL KVLKLQACKY LTDSSLEPLY KEGALPALEE LDLSYGTLCQ
801: TAIDDLLACC THLTHLSLNG CVNMHDLDWG STSVHLFDYF GVYSSSDNTQ EPAETANRLL QNLNCVGCPN IRKVLIPPAA RFYHLSTLNL SLSVNLKEVD
901: LTCSNLVLLN LSNCCSLEVL KLGCPRLASL FLQSCNMDEA GVEAAISGCS SLETLDLRFC PKISSVSMSK FRTVCPSLKR VFSSPNLLQD
Arabidopsis Description
FBL15SLOMO [Source:UniProtKB/TrEMBL;Acc:A0A178V148]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.