Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS3A01G099400.1 | |
| TraesCS3B01G115800.1 | |
| TraesCS3D01G099700.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G33210.1 | TraesCS3A01G099400.1 | AT2G01950.1 | 19000166 |
| AT4G33210.1 | TraesCS3B01G115800.1 | AT2G01950.1 | 19000166 |
| AT4G33210.1 | TraesCS3D01G099700.1 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G154100.1 | Wheat | cytosol | 98.03 | 93.01 |
| TraesCS1D01G136800.4 | Wheat | cytosol | 97.2 | 92.22 |
| Os10t0396400-01 | Rice | mitochondrion | 52.18 | 76.91 |
| OQU91850 | Sorghum | cytosol | 75.41 | 73.36 |
| Zm00001d014232_P014 | Maize | cytosol | 72.61 | 66.54 |
| Zm00001d033037_P008 | Maize | cytosol | 69.5 | 63.57 |
| GSMUA_Achr7P11390_001 | Banana | cytosol | 55.5 | 60.52 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, vacuole | 43.05 | 57.72 |
| Bra011427.1-P | Field mustard | cytosol | 37.45 | 54.7 |
| KRH52245 | Soybean | nucleus | 48.65 | 52.52 |
| KRH61576 | Soybean | nucleus | 47.82 | 51.28 |
| VIT_04s0008g01890.t01 | Wine grape | nucleus | 51.56 | 50.15 |
| PGSC0003DMT400048411 | Potato | cytosol | 49.48 | 49.69 |
| CDY28286 | Canola | nucleus | 44.92 | 49.49 |
| KRH15607 | Soybean | cytosol | 49.9 | 49.33 |
| CDY45031 | Canola | cytosol | 45.33 | 49.1 |
| KRH05410 | Soybean | cytosol | 49.9 | 48.98 |
| CDX75339 | Canola | cytosol | 49.07 | 48.91 |
| Bra034551.1-P | Field mustard | cytosol | 45.12 | 48.88 |
| AT4G33210.1 | Thale cress | cytosol | 50.1 | 48.79 |
| CDY28285 | Canola | cytosol | 45.12 | 48.77 |
| Solyc08g061820.2.1 | Tomato | cytosol | 49.59 | 48.73 |
| Bra034552.1-P | Field mustard | nucleus | 42.95 | 48.59 |
| CDY46126 | Canola | cytosol | 49.27 | 48.42 |
| Bra037014.1-P | Field mustard | nucleus | 49.48 | 48.38 |
| CDX68956 | Canola | cytosol | 48.86 | 48.21 |
| CDY45032 | Canola | nucleus | 42.84 | 47.36 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G136200.1 | EnsemblPlantsGene:TraesCS1A01G136200 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0008150 | GO:GO:0009653 | GO:GO:0010252 | GO:GO:1905393 | InterPro:F-box_dom | InterPro:IPR001810 |
| InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt_Cys-con_subtyp | PANTHER:PTHR44842 | PFAM:PF12937 | SEG:seg |
| SMART:SM00256 | SMART:SM00367 | SUPFAM:SSF52047 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr1A:+:213902924..213933580
Molecular Weight (calculated)
104271.0 Da
IEP (calculated)
4.809
GRAVY (calculated)
-0.006
Length
964 amino acids
Sequence
(BLAST)
(BLAST)
001: MADGGKMKGV EGSGEGTGHG EDMDEEAREE LELALSLGRQ GWHLPPVPVP PPAPALRWSM VFPAWDPDAA GSSRAAESVW DSPPVPPLRF RDMWRGGGAN
101: TDAGGAGEAE EHNNVEEEEG SEDGDRDLQN KRPKVGAFGE ESSGVNASFF GYEAPHLHAF AEHDHLKLSH APENELDFGL SLISNDGGND IPRETNSHGV
201: CDVERSGGTN AEDLEIRMDL SDDLLHLIFS FLCQKDLCRA GATCKQWQSA SMHEDFWKYL KFENTRISLQ NFVNICHRYQ NVTNLNLFGV LSAESLVIEA
301: ITFLRHLKTL IMGKGQLGET FFQALAECPL LNTLTVSDAS LGSGIQEVTV NHDGLRELQI VKCRALRVSI RCHQLRILSL RRTGMAHVSL NCPQLLELDF
401: QSCHKLSDTA IRQAATACPL LASVDMSSCS CVTDETLREI ANACQNLSVL DASNCPNISF ESVKLPMLVD LRLSSCEGIT SASMGAVCFS RILEALQLDN
501: CSLLTSVSLD LPHLKNISLV HLRKFADLNL RSPVLSYIKV SRCSALRCVT ITSNALKKLV LQKQESLCNL SLQCHNLIDV DLSDCESLTN EICKVFSDGG
601: GCPMLRSLIL DNCESLSVVE LNNSSLVNLS LAGCRSMTFL KLACPKLQVV ILDGCDHLER ASFCPVGLES LNLGICPKLS VLRIEAPNMS ILELKGCGVL
701: SEASINCPCL ISLDASFCRQ LMDDSLSQTA EACPLIEHLI LSSCLSIDVR GLSSLHCLQK LALLDLSYTF LMNLKPVFDS CLQLKXXXXX XXXXLSDSSL
801: EPLYREGALP MLVELDLSYS SIGQTAIKEL LACCTNLVNV NLNGCTNLHE LVCGSDYCRS GDMPVDAFPP DSAPDKTKEI RESSDCQLEV LNCTGCPNIK
901: KVVIPSTANY LNLSKINLNL SANLKEVDLK CSNLYNLNLS NCNSLEILKL DCPRLANLQL LRMN
101: TDAGGAGEAE EHNNVEEEEG SEDGDRDLQN KRPKVGAFGE ESSGVNASFF GYEAPHLHAF AEHDHLKLSH APENELDFGL SLISNDGGND IPRETNSHGV
201: CDVERSGGTN AEDLEIRMDL SDDLLHLIFS FLCQKDLCRA GATCKQWQSA SMHEDFWKYL KFENTRISLQ NFVNICHRYQ NVTNLNLFGV LSAESLVIEA
301: ITFLRHLKTL IMGKGQLGET FFQALAECPL LNTLTVSDAS LGSGIQEVTV NHDGLRELQI VKCRALRVSI RCHQLRILSL RRTGMAHVSL NCPQLLELDF
401: QSCHKLSDTA IRQAATACPL LASVDMSSCS CVTDETLREI ANACQNLSVL DASNCPNISF ESVKLPMLVD LRLSSCEGIT SASMGAVCFS RILEALQLDN
501: CSLLTSVSLD LPHLKNISLV HLRKFADLNL RSPVLSYIKV SRCSALRCVT ITSNALKKLV LQKQESLCNL SLQCHNLIDV DLSDCESLTN EICKVFSDGG
601: GCPMLRSLIL DNCESLSVVE LNNSSLVNLS LAGCRSMTFL KLACPKLQVV ILDGCDHLER ASFCPVGLES LNLGICPKLS VLRIEAPNMS ILELKGCGVL
701: SEASINCPCL ISLDASFCRQ LMDDSLSQTA EACPLIEHLI LSSCLSIDVR GLSSLHCLQK LALLDLSYTF LMNLKPVFDS CLQLKXXXXX XXXXLSDSSL
801: EPLYREGALP MLVELDLSYS SIGQTAIKEL LACCTNLVNV NLNGCTNLHE LVCGSDYCRS GDMPVDAFPP DSAPDKTKEI RESSDCQLEV LNCTGCPNIK
901: KVVIPSTANY LNLSKINLNL SANLKEVDLK CSNLYNLNLS NCNSLEILKL DCPRLANLQL LRMN
001: MRIWCFSCFT DEDEDEEDDN GGRVKKQSLA TAMDNSNGDG DFVNFGENER APRVPRWRLR LCAEESEAAW AELDRFWTSE IPLNQLVQGE SSSNVVAEAE
101: DCTMEEADHD SYHKRAKVYS GLAECRSVSG VSSDAGNSVS SVERTVSFGI ASSSRTDTDM FCQNFILNYN RKDGKKDDGD DNGSSDTEDF EVHIDLTDDL
201: LHMVFSFLNH VDLCRSAMVC RQWRVASAHE DFWRVLNFEN IRISMEQFEN MCSRYPNATE VNVYGAPAVN ALAMKAATTL RNLEVLTIGK GHISESFFQA
301: LGECNMLRSV TVSDAILGNG AQEIHLSHDR LRELKITKCR VMRLSIRCPQ LRSLSLKRSN MSQAMLNCPL LQLLDIASCH KLLDAAIRSA AISCPQLESL
401: DVSNCSCVSD ETLREIAQAC ANLHILNASY CPNISLESVH LPMLTVLKLH SCEGITSASM TWIANSPALE VLELDNCNLL TTVSLHLSRL QSISLVHCRK
501: FTDLNLQSIM LSSITVSNCP ALRRITITSN ALRRLALQKQ ENLTTLVLQC HSLQEVDLSD CESLSNSVCK IFSDDGGCPM LKSLILDNCE SLTAVRFCNS
601: SLASLSLVGC RAVTSLELKC PRIEQICLDG CDHLETAFFQ PVALRSLNLG ICPKLSVLNI EAPYMVSLEL KGCGVLSEAS IMCPLLTSLD ASFCSQLRDD
701: CLSATTASCP LIESLVLMSC PSIGSDGLSS LNGLPNLTVL DLSYTFLMNL EPVFKSCIQL KVLKLQACKY LTDSSLEPLY KEGALPALEE LDLSYGTLCQ
801: TAIDDLLACC THLTHLSLNG CVNMHDLDWG STSVHLFDYF GVYSSSDNTQ EPAETANRLL QNLNCVGCPN IRKVLIPPAA RFYHLSTLNL SLSVNLKEVD
901: LTCSNLVLLN LSNCCSLEVL KLGCPRLASL FLQSCNMDEA GVEAAISGCS SLETLDLRFC PKISSVSMSK FRTVCPSLKR VFSSPNLLQD
101: DCTMEEADHD SYHKRAKVYS GLAECRSVSG VSSDAGNSVS SVERTVSFGI ASSSRTDTDM FCQNFILNYN RKDGKKDDGD DNGSSDTEDF EVHIDLTDDL
201: LHMVFSFLNH VDLCRSAMVC RQWRVASAHE DFWRVLNFEN IRISMEQFEN MCSRYPNATE VNVYGAPAVN ALAMKAATTL RNLEVLTIGK GHISESFFQA
301: LGECNMLRSV TVSDAILGNG AQEIHLSHDR LRELKITKCR VMRLSIRCPQ LRSLSLKRSN MSQAMLNCPL LQLLDIASCH KLLDAAIRSA AISCPQLESL
401: DVSNCSCVSD ETLREIAQAC ANLHILNASY CPNISLESVH LPMLTVLKLH SCEGITSASM TWIANSPALE VLELDNCNLL TTVSLHLSRL QSISLVHCRK
501: FTDLNLQSIM LSSITVSNCP ALRRITITSN ALRRLALQKQ ENLTTLVLQC HSLQEVDLSD CESLSNSVCK IFSDDGGCPM LKSLILDNCE SLTAVRFCNS
601: SLASLSLVGC RAVTSLELKC PRIEQICLDG CDHLETAFFQ PVALRSLNLG ICPKLSVLNI EAPYMVSLEL KGCGVLSEAS IMCPLLTSLD ASFCSQLRDD
701: CLSATTASCP LIESLVLMSC PSIGSDGLSS LNGLPNLTVL DLSYTFLMNL EPVFKSCIQL KVLKLQACKY LTDSSLEPLY KEGALPALEE LDLSYGTLCQ
801: TAIDDLLACC THLTHLSLNG CVNMHDLDWG STSVHLFDYF GVYSSSDNTQ EPAETANRLL QNLNCVGCPN IRKVLIPPAA RFYHLSTLNL SLSVNLKEVD
901: LTCSNLVLLN LSNCCSLEVL KLGCPRLASL FLQSCNMDEA GVEAAISGCS SLETLDLRFC PKISSVSMSK FRTVCPSLKR VFSSPNLLQD
Arabidopsis Description
FBL15SLOMO [Source:UniProtKB/TrEMBL;Acc:A0A178V148]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.