Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr2P15100_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G33210.1 | GSMUA_Achr2P15100_001 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os10t0396400-01 | Rice | mitochondrion | 53.05 | 71.71 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, vacuole | 56.0 | 68.85 |
| OQU91850 | Sorghum | cytosol | 66.18 | 59.03 |
| TraesCS1D01G136800.4 | Wheat | cytosol | 65.16 | 56.69 |
| Bra011427.1-P | Field mustard | cytosol | 42.31 | 56.67 |
| TraesCS1B01G154100.1 | Wheat | cytosol | 64.59 | 56.2 |
| KRH52245 | Soybean | nucleus | 56.67 | 56.1 |
| TraesCS1A01G136200.1 | Wheat | cytosol | 60.52 | 55.5 |
| KRH61576 | Soybean | nucleus | 54.64 | 53.73 |
| VIT_04s0008g01890.t01 | Wine grape | nucleus | 59.39 | 52.98 |
| KRH15607 | Soybean | cytosol | 57.35 | 52.0 |
| Zm00001d014232_P014 | Maize | cytosol | 61.65 | 51.81 |
| KRH05410 | Soybean | cytosol | 56.9 | 51.22 |
| PGSC0003DMT400048411 | Potato | cytosol | 55.32 | 50.94 |
| Zm00001d033037_P008 | Maize | cytosol | 60.18 | 50.47 |
| CDY28286 | Canola | nucleus | 49.89 | 50.4 |
| Solyc08g061820.2.1 | Tomato | cytosol | 55.54 | 50.05 |
| Bra034552.1-P | Field mustard | nucleus | 47.85 | 49.65 |
| CDX75339 | Canola | cytosol | 53.73 | 49.12 |
| AT4G33210.1 | Thale cress | cytosol | 54.86 | 48.99 |
| CDX68956 | Canola | cytosol | 53.73 | 48.62 |
| CDY28285 | Canola | cytosol | 48.42 | 47.98 |
| CDY46126 | Canola | cytosol | 53.17 | 47.91 |
| Bra037014.1-P | Field mustard | nucleus | 53.17 | 47.67 |
| CDY45032 | Canola | nucleus | 46.95 | 47.59 |
| CDY45031 | Canola | cytosol | 47.51 | 47.19 |
| Bra034551.1-P | Field mustard | cytosol | 47.4 | 47.08 |
Protein Annotations
| Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 | MapMan:35.1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSMUA_Achr7G11390_001 | EnsemblPlants:GSMUA_Achr7P11390_001 | EnsemblPlants:GSMUA_Achr7T11390_001 | InterPro:IPR001611 |
| InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_Cys-con_subtyp | UniProt:M0TGM7 |
| PFAM:PF12937 | PFAM:PF13516 | PANTHER:PTHR44842 | SMART:SM00256 | SMART:SM00367 | SUPFAM:SSF52047 |
| SUPFAM:SSF52058 | SUPFAM:SSF81383 | UniParc:UPI000295469D | SEG:seg | : | : |
Description
F-box/LRR-repeat protein 15 [Source:GMGC_GENE;Acc:GSMUA_Achr7G11390_001]
Coordinates
chr7:+:9112477..9122438
Molecular Weight (calculated)
97535.4 Da
IEP (calculated)
6.258
GRAVY (calculated)
0.181
Length
884 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSSSFILCV SCRFPSSSDA EVAGQPAVVD FMSQNSSALS ENEVAYYLNL FPNDDAVGRT SDFNNGGSSY EDMSSMRNTE DLEIRMDLSD DLLHLIFSFL
101: GQKDLCRAGA TCKQWLVAST HEDFWRCLEF TSTAISPQNF IAICRRYPNA MALTMADILN SNALVIEAMA SLRHLGTLIL KKGQFGDRFF HALTDCPALT
201: KLRIHDASLG NNIQEITVYH DRLHDLQFEK CRVFRISIRC PQLQILSLKR TSMAHVSLSC PQLRELDLTA CHKLSDAAIR SAVTTCPLLG SLNMSSCSCV
301: TDETLREIAF ACPNLCILDA SYCPNVSFES VRLPMLIDLK LDSCEGITST SMSALSYSHM LEALLLDNCG LLTSVSLDLP HLQSISLVHL RKFVDLNLRS
401: PVLQSVKVSR CSALHRISIT SRAIDKLVLQ KQESLATLSL QCHNLQEVDL SDCESLMNSV CEVFSDGGGC PMLRSLVLDN CERISDVGLN NSSLLTLSLA
501: GCHAMTNLDL SCPKLQKVNL DGCDHLERAS FCPVGLESLN LGICPKLNVL VIKAPKMSLL ELKGCGVLSQ ASIHCPSLTS LDASFCRQFM DESLSTTAAS
601: CPHIESLILS SCLSIGPVGL SSLHWLHHLT LLDLSYTFLM NLQPVFDTCS RLVILKLSAC KFLTDSSLYA LYKKGALPTL RELDLSYSSI GQSAITELLA
701: YCTNLVHVNL NGCVNMVELV WRSRHNSSNM AVDTFSSNSI SVQNDGEGFK KPEHLLEFLS CTGCPRIKRV YVPSTANCSH LSKINLNLCT YLKEVDLSCT
801: NLSILNLSYC SSLEILKLNC PRLNNLQLLA CSMLVEEELE AAISHCSMLE ILNIHSCPKI YIEDFERLRI VCPSLKRIHC SPLM
101: GQKDLCRAGA TCKQWLVAST HEDFWRCLEF TSTAISPQNF IAICRRYPNA MALTMADILN SNALVIEAMA SLRHLGTLIL KKGQFGDRFF HALTDCPALT
201: KLRIHDASLG NNIQEITVYH DRLHDLQFEK CRVFRISIRC PQLQILSLKR TSMAHVSLSC PQLRELDLTA CHKLSDAAIR SAVTTCPLLG SLNMSSCSCV
301: TDETLREIAF ACPNLCILDA SYCPNVSFES VRLPMLIDLK LDSCEGITST SMSALSYSHM LEALLLDNCG LLTSVSLDLP HLQSISLVHL RKFVDLNLRS
401: PVLQSVKVSR CSALHRISIT SRAIDKLVLQ KQESLATLSL QCHNLQEVDL SDCESLMNSV CEVFSDGGGC PMLRSLVLDN CERISDVGLN NSSLLTLSLA
501: GCHAMTNLDL SCPKLQKVNL DGCDHLERAS FCPVGLESLN LGICPKLNVL VIKAPKMSLL ELKGCGVLSQ ASIHCPSLTS LDASFCRQFM DESLSTTAAS
601: CPHIESLILS SCLSIGPVGL SSLHWLHHLT LLDLSYTFLM NLQPVFDTCS RLVILKLSAC KFLTDSSLYA LYKKGALPTL RELDLSYSSI GQSAITELLA
701: YCTNLVHVNL NGCVNMVELV WRSRHNSSNM AVDTFSSNSI SVQNDGEGFK KPEHLLEFLS CTGCPRIKRV YVPSTANCSH LSKINLNLCT YLKEVDLSCT
801: NLSILNLSYC SSLEILKLNC PRLNNLQLLA CSMLVEEELE AAISHCSMLE ILNIHSCPKI YIEDFERLRI VCPSLKRIHC SPLM
001: MRIWCFSCFT DEDEDEEDDN GGRVKKQSLA TAMDNSNGDG DFVNFGENER APRVPRWRLR LCAEESEAAW AELDRFWTSE IPLNQLVQGE SSSNVVAEAE
101: DCTMEEADHD SYHKRAKVYS GLAECRSVSG VSSDAGNSVS SVERTVSFGI ASSSRTDTDM FCQNFILNYN RKDGKKDDGD DNGSSDTEDF EVHIDLTDDL
201: LHMVFSFLNH VDLCRSAMVC RQWRVASAHE DFWRVLNFEN IRISMEQFEN MCSRYPNATE VNVYGAPAVN ALAMKAATTL RNLEVLTIGK GHISESFFQA
301: LGECNMLRSV TVSDAILGNG AQEIHLSHDR LRELKITKCR VMRLSIRCPQ LRSLSLKRSN MSQAMLNCPL LQLLDIASCH KLLDAAIRSA AISCPQLESL
401: DVSNCSCVSD ETLREIAQAC ANLHILNASY CPNISLESVH LPMLTVLKLH SCEGITSASM TWIANSPALE VLELDNCNLL TTVSLHLSRL QSISLVHCRK
501: FTDLNLQSIM LSSITVSNCP ALRRITITSN ALRRLALQKQ ENLTTLVLQC HSLQEVDLSD CESLSNSVCK IFSDDGGCPM LKSLILDNCE SLTAVRFCNS
601: SLASLSLVGC RAVTSLELKC PRIEQICLDG CDHLETAFFQ PVALRSLNLG ICPKLSVLNI EAPYMVSLEL KGCGVLSEAS IMCPLLTSLD ASFCSQLRDD
701: CLSATTASCP LIESLVLMSC PSIGSDGLSS LNGLPNLTVL DLSYTFLMNL EPVFKSCIQL KVLKLQACKY LTDSSLEPLY KEGALPALEE LDLSYGTLCQ
801: TAIDDLLACC THLTHLSLNG CVNMHDLDWG STSVHLFDYF GVYSSSDNTQ EPAETANRLL QNLNCVGCPN IRKVLIPPAA RFYHLSTLNL SLSVNLKEVD
901: LTCSNLVLLN LSNCCSLEVL KLGCPRLASL FLQSCNMDEA GVEAAISGCS SLETLDLRFC PKISSVSMSK FRTVCPSLKR VFSSPNLLQD
101: DCTMEEADHD SYHKRAKVYS GLAECRSVSG VSSDAGNSVS SVERTVSFGI ASSSRTDTDM FCQNFILNYN RKDGKKDDGD DNGSSDTEDF EVHIDLTDDL
201: LHMVFSFLNH VDLCRSAMVC RQWRVASAHE DFWRVLNFEN IRISMEQFEN MCSRYPNATE VNVYGAPAVN ALAMKAATTL RNLEVLTIGK GHISESFFQA
301: LGECNMLRSV TVSDAILGNG AQEIHLSHDR LRELKITKCR VMRLSIRCPQ LRSLSLKRSN MSQAMLNCPL LQLLDIASCH KLLDAAIRSA AISCPQLESL
401: DVSNCSCVSD ETLREIAQAC ANLHILNASY CPNISLESVH LPMLTVLKLH SCEGITSASM TWIANSPALE VLELDNCNLL TTVSLHLSRL QSISLVHCRK
501: FTDLNLQSIM LSSITVSNCP ALRRITITSN ALRRLALQKQ ENLTTLVLQC HSLQEVDLSD CESLSNSVCK IFSDDGGCPM LKSLILDNCE SLTAVRFCNS
601: SLASLSLVGC RAVTSLELKC PRIEQICLDG CDHLETAFFQ PVALRSLNLG ICPKLSVLNI EAPYMVSLEL KGCGVLSEAS IMCPLLTSLD ASFCSQLRDD
701: CLSATTASCP LIESLVLMSC PSIGSDGLSS LNGLPNLTVL DLSYTFLMNL EPVFKSCIQL KVLKLQACKY LTDSSLEPLY KEGALPALEE LDLSYGTLCQ
801: TAIDDLLACC THLTHLSLNG CVNMHDLDWG STSVHLFDYF GVYSSSDNTQ EPAETANRLL QNLNCVGCPN IRKVLIPPAA RFYHLSTLNL SLSVNLKEVD
901: LTCSNLVLLN LSNCCSLEVL KLGCPRLASL FLQSCNMDEA GVEAAISGCS SLETLDLRFC PKISSVSMSK FRTVCPSLKR VFSSPNLLQD
Arabidopsis Description
FBL15SLOMO [Source:UniProtKB/TrEMBL;Acc:A0A178V148]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.