Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400075691 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G33210.1 | PGSC0003DMT400075691 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g061820.2.1 | Tomato | cytosol | 97.4 | 95.31 |
| KRH52245 | Soybean | nucleus | 62.81 | 67.53 |
| Bra011427.1-P | Field mustard | cytosol | 45.94 | 66.82 |
| VIT_04s0008g01890.t01 | Wine grape | nucleus | 68.23 | 66.09 |
| KRH15607 | Soybean | cytosol | 65.94 | 64.92 |
| KRH61576 | Soybean | nucleus | 60.62 | 64.74 |
| KRH05410 | Soybean | cytosol | 65.0 | 63.54 |
| Os10t0396400-01 | Rice | mitochondrion | 42.71 | 62.69 |
| CDY28286 | Canola | nucleus | 55.1 | 60.46 |
| CDX75339 | Canola | cytosol | 60.73 | 60.29 |
| CDX68956 | Canola | cytosol | 61.15 | 60.08 |
| CDY46126 | Canola | cytosol | 61.15 | 59.84 |
| AT4G33210.1 | Thale cress | cytosol | 61.56 | 59.7 |
| Bra034552.1-P | Field mustard | nucleus | 52.81 | 59.51 |
| Bra037014.1-P | Field mustard | nucleus | 61.04 | 59.43 |
| CDY45032 | Canola | nucleus | 52.71 | 58.03 |
| Bra034551.1-P | Field mustard | cytosol | 53.75 | 57.98 |
| CDY28285 | Canola | cytosol | 53.85 | 57.96 |
| CDY45031 | Canola | cytosol | 53.44 | 57.64 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, vacuole | 42.92 | 57.3 |
| GSMUA_Achr7P11390_001 | Banana | cytosol | 50.94 | 55.32 |
| OQU91850 | Sorghum | cytosol | 52.4 | 50.76 |
| TraesCS1B01G154100.1 | Wheat | cytosol | 52.92 | 50.0 |
| TraesCS1D01G136800.4 | Wheat | cytosol | 52.5 | 49.61 |
| TraesCS1A01G136200.1 | Wheat | cytosol | 49.69 | 49.48 |
| Zm00001d014232_P014 | Maize | cytosol | 50.1 | 45.72 |
| Zm00001d033037_P008 | Maize | cytosol | 48.33 | 44.02 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0008150 | GO:GO:0009653 | GO:GO:0010252 | GO:GO:1905393 | InterPro:IPR001810 | InterPro:IPR032675 |
| InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt_Cys-con_subtyp | UniProt:M1BME5 | PFAM:PF12937 | EnsemblPlantsGene:PGSC0003DMG400018806 | PGSC:PGSC0003DMG400018806 |
| EnsemblPlants:PGSC0003DMT400048411 | PFscan:PS50181 | PANTHER:PTHR44842 | SMART:SM00256 | SMART:SM00367 | SUPFAM:SSF52047 |
| SUPFAM:SSF52058 | UniParc:UPI0002947F7C | SEG:seg | : | : | : |
Description
F-box/LRR-repeat protein 15 [Source:PGSC_GENE;Acc:PGSC0003DMG400018806]
Coordinates
chr8:-:33609225..33619213
Molecular Weight (calculated)
104964.0 Da
IEP (calculated)
4.654
GRAVY (calculated)
0.120
Length
960 amino acids
Sequence
(BLAST)
(BLAST)
001: MRDPILGNNG DESPDENSAF DWRNVFEGVN VAAVVSPQAG AAGDLGVPKN EEIDFDSNWL SSEVEVKNEN YSGEKMLDVN LNLGLSGEAS SSTVLKEDSD
101: RDTCSKRPKV NSFSLDWDNH LLLETSYLCP MNEGGGDMSL SNLLGATDAE GKDSKMDYLD VRMDLTDDLL HMVFSFLDHI DLCRAASVCS QWRAASSHED
201: FWRYLNFENK QISSNQFEDM CRRYPNATTI NLYGTPNIHP LAMKAVSSLR NLETLSLGRG QLGETFFQAL TDCHVLRSLT INDATLGNGI QEIPISHDSL
301: RLLQLVKCRV LRVSIRCPQL ETLSLKRSSM PHAVLNCPLL HDLDIASCHK LSDAAIRSAA TACPLLESLD MSNCSCVSDE TLRDIAQTCG NLRVLDASYC
401: PNISLESVRL VMLTVLKLHS CEGITSASMA AIAHSYMLEV LELDNCSLLT SVSLDLPRLQ SIRLVHCRKF IDLNLHCGML SSITVSNCPL LHRINITSSA
501: LKKLVLQKQE SLTTIALQCP NLLEVDLTEC ESLTNSICEV FSDGGGCPVL KSLVLDNCES LTLVAFCSTS LVSLSLGGCR ALISLALSCR YLEQVSLDGC
601: DHLEVASFCP VGLRSLNLGI CPKMNMLHIE APQMASLELK GCGVLSEASI NCPLLTSFDA SFCSQLKDDC LSATTSSCPL IESLVLMSCP SVGCDGLLSL
701: QSLPNLTYLD LSYTFLVTLQ PVYESCLQLK VLKLQACKYL TDTSLEPLYK ENALPALCEL DLSYGTLCQS AIEELLACCT HLSHVSLNGC INMHDLNWGF
801: TGDQLSHIPS VSIPHGSSLG EQQLPNEQPK RLLENLNCVG CPNIKKVFIP MAQGFLLSSL NLSLSANLKE VDIACYNLCV LNLSNCCSLE SLQLECPRLS
901: SLFLQSCNID EEAVEAAVSR CTMLETLDVR FCPKICPLNM TRLRVACPSL KRIFSSLVPS
101: RDTCSKRPKV NSFSLDWDNH LLLETSYLCP MNEGGGDMSL SNLLGATDAE GKDSKMDYLD VRMDLTDDLL HMVFSFLDHI DLCRAASVCS QWRAASSHED
201: FWRYLNFENK QISSNQFEDM CRRYPNATTI NLYGTPNIHP LAMKAVSSLR NLETLSLGRG QLGETFFQAL TDCHVLRSLT INDATLGNGI QEIPISHDSL
301: RLLQLVKCRV LRVSIRCPQL ETLSLKRSSM PHAVLNCPLL HDLDIASCHK LSDAAIRSAA TACPLLESLD MSNCSCVSDE TLRDIAQTCG NLRVLDASYC
401: PNISLESVRL VMLTVLKLHS CEGITSASMA AIAHSYMLEV LELDNCSLLT SVSLDLPRLQ SIRLVHCRKF IDLNLHCGML SSITVSNCPL LHRINITSSA
501: LKKLVLQKQE SLTTIALQCP NLLEVDLTEC ESLTNSICEV FSDGGGCPVL KSLVLDNCES LTLVAFCSTS LVSLSLGGCR ALISLALSCR YLEQVSLDGC
601: DHLEVASFCP VGLRSLNLGI CPKMNMLHIE APQMASLELK GCGVLSEASI NCPLLTSFDA SFCSQLKDDC LSATTSSCPL IESLVLMSCP SVGCDGLLSL
701: QSLPNLTYLD LSYTFLVTLQ PVYESCLQLK VLKLQACKYL TDTSLEPLYK ENALPALCEL DLSYGTLCQS AIEELLACCT HLSHVSLNGC INMHDLNWGF
801: TGDQLSHIPS VSIPHGSSLG EQQLPNEQPK RLLENLNCVG CPNIKKVFIP MAQGFLLSSL NLSLSANLKE VDIACYNLCV LNLSNCCSLE SLQLECPRLS
901: SLFLQSCNID EEAVEAAVSR CTMLETLDVR FCPKICPLNM TRLRVACPSL KRIFSSLVPS
001: MRIWCFSCFT DEDEDEEDDN GGRVKKQSLA TAMDNSNGDG DFVNFGENER APRVPRWRLR LCAEESEAAW AELDRFWTSE IPLNQLVQGE SSSNVVAEAE
101: DCTMEEADHD SYHKRAKVYS GLAECRSVSG VSSDAGNSVS SVERTVSFGI ASSSRTDTDM FCQNFILNYN RKDGKKDDGD DNGSSDTEDF EVHIDLTDDL
201: LHMVFSFLNH VDLCRSAMVC RQWRVASAHE DFWRVLNFEN IRISMEQFEN MCSRYPNATE VNVYGAPAVN ALAMKAATTL RNLEVLTIGK GHISESFFQA
301: LGECNMLRSV TVSDAILGNG AQEIHLSHDR LRELKITKCR VMRLSIRCPQ LRSLSLKRSN MSQAMLNCPL LQLLDIASCH KLLDAAIRSA AISCPQLESL
401: DVSNCSCVSD ETLREIAQAC ANLHILNASY CPNISLESVH LPMLTVLKLH SCEGITSASM TWIANSPALE VLELDNCNLL TTVSLHLSRL QSISLVHCRK
501: FTDLNLQSIM LSSITVSNCP ALRRITITSN ALRRLALQKQ ENLTTLVLQC HSLQEVDLSD CESLSNSVCK IFSDDGGCPM LKSLILDNCE SLTAVRFCNS
601: SLASLSLVGC RAVTSLELKC PRIEQICLDG CDHLETAFFQ PVALRSLNLG ICPKLSVLNI EAPYMVSLEL KGCGVLSEAS IMCPLLTSLD ASFCSQLRDD
701: CLSATTASCP LIESLVLMSC PSIGSDGLSS LNGLPNLTVL DLSYTFLMNL EPVFKSCIQL KVLKLQACKY LTDSSLEPLY KEGALPALEE LDLSYGTLCQ
801: TAIDDLLACC THLTHLSLNG CVNMHDLDWG STSVHLFDYF GVYSSSDNTQ EPAETANRLL QNLNCVGCPN IRKVLIPPAA RFYHLSTLNL SLSVNLKEVD
901: LTCSNLVLLN LSNCCSLEVL KLGCPRLASL FLQSCNMDEA GVEAAISGCS SLETLDLRFC PKISSVSMSK FRTVCPSLKR VFSSPNLLQD
101: DCTMEEADHD SYHKRAKVYS GLAECRSVSG VSSDAGNSVS SVERTVSFGI ASSSRTDTDM FCQNFILNYN RKDGKKDDGD DNGSSDTEDF EVHIDLTDDL
201: LHMVFSFLNH VDLCRSAMVC RQWRVASAHE DFWRVLNFEN IRISMEQFEN MCSRYPNATE VNVYGAPAVN ALAMKAATTL RNLEVLTIGK GHISESFFQA
301: LGECNMLRSV TVSDAILGNG AQEIHLSHDR LRELKITKCR VMRLSIRCPQ LRSLSLKRSN MSQAMLNCPL LQLLDIASCH KLLDAAIRSA AISCPQLESL
401: DVSNCSCVSD ETLREIAQAC ANLHILNASY CPNISLESVH LPMLTVLKLH SCEGITSASM TWIANSPALE VLELDNCNLL TTVSLHLSRL QSISLVHCRK
501: FTDLNLQSIM LSSITVSNCP ALRRITITSN ALRRLALQKQ ENLTTLVLQC HSLQEVDLSD CESLSNSVCK IFSDDGGCPM LKSLILDNCE SLTAVRFCNS
601: SLASLSLVGC RAVTSLELKC PRIEQICLDG CDHLETAFFQ PVALRSLNLG ICPKLSVLNI EAPYMVSLEL KGCGVLSEAS IMCPLLTSLD ASFCSQLRDD
701: CLSATTASCP LIESLVLMSC PSIGSDGLSS LNGLPNLTVL DLSYTFLMNL EPVFKSCIQL KVLKLQACKY LTDSSLEPLY KEGALPALEE LDLSYGTLCQ
801: TAIDDLLACC THLTHLSLNG CVNMHDLDWG STSVHLFDYF GVYSSSDNTQ EPAETANRLL QNLNCVGCPN IRKVLIPPAA RFYHLSTLNL SLSVNLKEVD
901: LTCSNLVLLN LSNCCSLEVL KLGCPRLASL FLQSCNMDEA GVEAAISGCS SLETLDLRFC PKISSVSMSK FRTVCPSLKR VFSSPNLLQD
Arabidopsis Description
FBL15SLOMO [Source:UniProtKB/TrEMBL;Acc:A0A178V148]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.