Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G33210.1 | CDY03088 | AT2G01950.1 | 19000166 |
| AT4G33210.1 | CDY17621 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011427.1-P | Field mustard | cytosol | 67.32 | 98.64 |
| CDX68956 | Canola | cytosol | 96.9 | 95.91 |
| AT4G33210.1 | Thale cress | cytosol | 89.35 | 87.27 |
| CDY46126 | Canola | cytosol | 87.49 | 86.24 |
| CDY28286 | Canola | nucleus | 70.73 | 78.17 |
| CDY28285 | Canola | cytosol | 71.98 | 78.03 |
| CDY45031 | Canola | cytosol | 70.63 | 76.74 |
| CDY45032 | Canola | nucleus | 69.08 | 76.61 |
| KRH52245 | Soybean | nucleus | 61.32 | 66.41 |
| KRH15607 | Soybean | cytosol | 63.08 | 62.56 |
| KRH61576 | Soybean | nucleus | 57.81 | 62.18 |
| KRH05410 | Soybean | cytosol | 62.46 | 61.51 |
| VIT_04s0008g01890.t01 | Wine grape | nucleus | 62.46 | 60.95 |
| Solyc08g061820.2.1 | Tomato | cytosol | 61.74 | 60.86 |
| PGSC0003DMT400048411 | Potato | cytosol | 60.29 | 60.73 |
| Os10t0396400-01 | Rice | mitochondrion | 40.43 | 59.79 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, vacuole | 40.54 | 54.52 |
| GSMUA_Achr7P11390_001 | Banana | cytosol | 49.12 | 53.73 |
| OQU91850 | Sorghum | cytosol | 51.5 | 50.25 |
| TraesCS1B01G154100.1 | Wheat | cytosol | 51.81 | 49.31 |
| TraesCS1D01G136800.4 | Wheat | cytosol | 51.71 | 49.21 |
| TraesCS1A01G136200.1 | Wheat | cytosol | 48.91 | 49.07 |
| Zm00001d014232_P014 | Maize | cytosol | 49.33 | 45.34 |
| Zm00001d033037_P008 | Maize | cytosol | 47.16 | 43.26 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | EnsemblPlants:CDX75339 | ProteinID:CDX75339 | ProteinID:CDX75339.1 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00121217001 | InterPro:IPR001810 |
| InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt_Cys-con_subtyp | PFAM:PF00646 | PANTHER:PTHR44842 | SMART:SM00256 |
| SMART:SM00367 | SUPFAM:SSF52047 | SUPFAM:SSF52058 | SUPFAM:SSF81383 | UniParc:UPI0004EF4651 | SEG:seg |
Description
BnaA01g03630D
Coordinates
chrLK031804:-:712053..717316
Molecular Weight (calculated)
106436.0 Da
IEP (calculated)
4.864
GRAVY (calculated)
-0.002
Length
967 amino acids
Sequence
(BLAST)
(BLAST)
001: MRIWCFHCFT NDEEQEENRN RGGVSHRLKK QSAMDDNNNN NNKGGDFVGF DLNEREENGA ELERVRSSEI RLHQLVQGES SNEDCTMEEA DHDSYHKRAK
101: VYSGLAVSSD AGNSGSSVER SVSFGVASSS RTDADMFCQN FILNYAGRKD GKRDDGDDNG SSDAEDFEVH IDLTDDLLHM VFSFLSHIDL CRSAMVCRQW
201: RVASAHEDFW KVLNFENMRI SIEQFEDMCH RYPNATEVNV YGAPAVNALA MKAATTLRNL EVLIIGKGHI SENFFQALEE CNMLRSVTVN EAILGNGAQE
301: INLSHDRLRE LKITKCRVMR LSLRCPQLRS LSLKRSNMSQ AMLNCPLLQL LDIASCHKLL DAAIRSAAIS CPQLESLDVS NCSCVSDETL REIAQACAGL
401: HSLNASYCPN ISLESVHLPM LTVLKLHSCE GITSASMTWI ANSHALEVLE LDNCNLLTSV ALHLSRLQSI SLVHCRKFTE LNLQSTMLSS ITISNCPALR
501: RITIASNSLR RLALQKQENL TTLVLQCQSL QEVDLSDCES LSNTVCEIFS DDGGCPMLKS LILDNCESLT EVRFCNSSLA TLSLVGCRAV TSLELKCPRI
601: EEICLDGCDH LETALFQPVA LRSLNLGICP KLSVLNIEAP YMVSLELKGC GVLSEASIIC PLLTSLDASF CGQLTDDCLS ATTASCPLIE SLVLMSCPSI
701: GSDGLSSLNG LPNLTVLDLS YTFLMNLEPI FKSCIQLKVL KLQACKYLTD SSLEPLYKEG ALPALEELDL SYGTLCQTAI DDLLAYCTHL THLSLNGCVN
801: MHDLDWGSTN VQLFDYFGGY SSSENTQEAA ETANRLLQNL NCVGCPNIRK VLIPPAARFY HLSSLNLSLS VNLKEVNLAC SNLVLLNLSN CCSLEVLKLS
901: CPRLASLFLQ SCNMDEAGVE AAISGCCSLE TLDLRFCPKI SSVSMGRFRT VCPSLKRVFS SPNLLQD
101: VYSGLAVSSD AGNSGSSVER SVSFGVASSS RTDADMFCQN FILNYAGRKD GKRDDGDDNG SSDAEDFEVH IDLTDDLLHM VFSFLSHIDL CRSAMVCRQW
201: RVASAHEDFW KVLNFENMRI SIEQFEDMCH RYPNATEVNV YGAPAVNALA MKAATTLRNL EVLIIGKGHI SENFFQALEE CNMLRSVTVN EAILGNGAQE
301: INLSHDRLRE LKITKCRVMR LSLRCPQLRS LSLKRSNMSQ AMLNCPLLQL LDIASCHKLL DAAIRSAAIS CPQLESLDVS NCSCVSDETL REIAQACAGL
401: HSLNASYCPN ISLESVHLPM LTVLKLHSCE GITSASMTWI ANSHALEVLE LDNCNLLTSV ALHLSRLQSI SLVHCRKFTE LNLQSTMLSS ITISNCPALR
501: RITIASNSLR RLALQKQENL TTLVLQCQSL QEVDLSDCES LSNTVCEIFS DDGGCPMLKS LILDNCESLT EVRFCNSSLA TLSLVGCRAV TSLELKCPRI
601: EEICLDGCDH LETALFQPVA LRSLNLGICP KLSVLNIEAP YMVSLELKGC GVLSEASIIC PLLTSLDASF CGQLTDDCLS ATTASCPLIE SLVLMSCPSI
701: GSDGLSSLNG LPNLTVLDLS YTFLMNLEPI FKSCIQLKVL KLQACKYLTD SSLEPLYKEG ALPALEELDL SYGTLCQTAI DDLLAYCTHL THLSLNGCVN
801: MHDLDWGSTN VQLFDYFGGY SSSENTQEAA ETANRLLQNL NCVGCPNIRK VLIPPAARFY HLSSLNLSLS VNLKEVNLAC SNLVLLNLSN CCSLEVLKLS
901: CPRLASLFLQ SCNMDEAGVE AAISGCCSLE TLDLRFCPKI SSVSMGRFRT VCPSLKRVFS SPNLLQD
001: MRIWCFSCFT DEDEDEEDDN GGRVKKQSLA TAMDNSNGDG DFVNFGENER APRVPRWRLR LCAEESEAAW AELDRFWTSE IPLNQLVQGE SSSNVVAEAE
101: DCTMEEADHD SYHKRAKVYS GLAECRSVSG VSSDAGNSVS SVERTVSFGI ASSSRTDTDM FCQNFILNYN RKDGKKDDGD DNGSSDTEDF EVHIDLTDDL
201: LHMVFSFLNH VDLCRSAMVC RQWRVASAHE DFWRVLNFEN IRISMEQFEN MCSRYPNATE VNVYGAPAVN ALAMKAATTL RNLEVLTIGK GHISESFFQA
301: LGECNMLRSV TVSDAILGNG AQEIHLSHDR LRELKITKCR VMRLSIRCPQ LRSLSLKRSN MSQAMLNCPL LQLLDIASCH KLLDAAIRSA AISCPQLESL
401: DVSNCSCVSD ETLREIAQAC ANLHILNASY CPNISLESVH LPMLTVLKLH SCEGITSASM TWIANSPALE VLELDNCNLL TTVSLHLSRL QSISLVHCRK
501: FTDLNLQSIM LSSITVSNCP ALRRITITSN ALRRLALQKQ ENLTTLVLQC HSLQEVDLSD CESLSNSVCK IFSDDGGCPM LKSLILDNCE SLTAVRFCNS
601: SLASLSLVGC RAVTSLELKC PRIEQICLDG CDHLETAFFQ PVALRSLNLG ICPKLSVLNI EAPYMVSLEL KGCGVLSEAS IMCPLLTSLD ASFCSQLRDD
701: CLSATTASCP LIESLVLMSC PSIGSDGLSS LNGLPNLTVL DLSYTFLMNL EPVFKSCIQL KVLKLQACKY LTDSSLEPLY KEGALPALEE LDLSYGTLCQ
801: TAIDDLLACC THLTHLSLNG CVNMHDLDWG STSVHLFDYF GVYSSSDNTQ EPAETANRLL QNLNCVGCPN IRKVLIPPAA RFYHLSTLNL SLSVNLKEVD
901: LTCSNLVLLN LSNCCSLEVL KLGCPRLASL FLQSCNMDEA GVEAAISGCS SLETLDLRFC PKISSVSMSK FRTVCPSLKR VFSSPNLLQD
101: DCTMEEADHD SYHKRAKVYS GLAECRSVSG VSSDAGNSVS SVERTVSFGI ASSSRTDTDM FCQNFILNYN RKDGKKDDGD DNGSSDTEDF EVHIDLTDDL
201: LHMVFSFLNH VDLCRSAMVC RQWRVASAHE DFWRVLNFEN IRISMEQFEN MCSRYPNATE VNVYGAPAVN ALAMKAATTL RNLEVLTIGK GHISESFFQA
301: LGECNMLRSV TVSDAILGNG AQEIHLSHDR LRELKITKCR VMRLSIRCPQ LRSLSLKRSN MSQAMLNCPL LQLLDIASCH KLLDAAIRSA AISCPQLESL
401: DVSNCSCVSD ETLREIAQAC ANLHILNASY CPNISLESVH LPMLTVLKLH SCEGITSASM TWIANSPALE VLELDNCNLL TTVSLHLSRL QSISLVHCRK
501: FTDLNLQSIM LSSITVSNCP ALRRITITSN ALRRLALQKQ ENLTTLVLQC HSLQEVDLSD CESLSNSVCK IFSDDGGCPM LKSLILDNCE SLTAVRFCNS
601: SLASLSLVGC RAVTSLELKC PRIEQICLDG CDHLETAFFQ PVALRSLNLG ICPKLSVLNI EAPYMVSLEL KGCGVLSEAS IMCPLLTSLD ASFCSQLRDD
701: CLSATTASCP LIESLVLMSC PSIGSDGLSS LNGLPNLTVL DLSYTFLMNL EPVFKSCIQL KVLKLQACKY LTDSSLEPLY KEGALPALEE LDLSYGTLCQ
801: TAIDDLLACC THLTHLSLNG CVNMHDLDWG STSVHLFDYF GVYSSSDNTQ EPAETANRLL QNLNCVGCPN IRKVLIPPAA RFYHLSTLNL SLSVNLKEVD
901: LTCSNLVLLN LSNCCSLEVL KLGCPRLASL FLQSCNMDEA GVEAAISGCS SLETLDLRFC PKISSVSMSK FRTVCPSLKR VFSSPNLLQD
Arabidopsis Description
FBL15SLOMO [Source:UniProtKB/TrEMBL;Acc:A0A178V148]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.