Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| OQU92006 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G33210.1 | OQU92006 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os10t0396400-01 | Rice | mitochondrion | 57.72 | 87.46 |
| Zm00001d033037_P008 | Maize | cytosol | 88.6 | 83.3 |
| Zm00001d014232_P014 | Maize | cytosol | 86.38 | 81.37 |
| TraesCS1B01G154100.1 | Wheat | cytosol | 78.71 | 76.77 |
| TraesCS1D01G136800.4 | Wheat | cytosol | 78.41 | 76.48 |
| TraesCS1A01G136200.1 | Wheat | cytosol | 73.36 | 75.41 |
| GSMUA_Achr7P11390_001 | Banana | cytosol | 59.03 | 66.18 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, vacuole | 47.33 | 65.23 |
| Bra011427.1-P | Field mustard | cytosol | 38.24 | 57.42 |
| KRH52245 | Soybean | nucleus | 50.76 | 56.33 |
| KRH61576 | Soybean | nucleus | 48.44 | 53.39 |
| VIT_04s0008g01890.t01 | Wine grape | nucleus | 52.98 | 52.98 |
| CDY28286 | Canola | nucleus | 46.52 | 52.69 |
| KRH15607 | Soybean | cytosol | 51.77 | 52.62 |
| PGSC0003DMT400048411 | Potato | cytosol | 50.76 | 52.4 |
| KRH05410 | Soybean | cytosol | 51.87 | 52.34 |
| Bra034552.1-P | Field mustard | nucleus | 44.6 | 51.88 |
| CDX75339 | Canola | cytosol | 50.25 | 51.5 |
| Solyc08g061820.2.1 | Tomato | cytosol | 50.96 | 51.48 |
| CDY45031 | Canola | cytosol | 45.91 | 51.12 |
| Bra034551.1-P | Field mustard | cytosol | 45.81 | 51.01 |
| CDY46126 | Canola | cytosol | 50.45 | 50.97 |
| Bra037014.1-P | Field mustard | nucleus | 50.45 | 50.71 |
| AT4G33210.1 | Thale cress | cytosol | 50.66 | 50.71 |
| CDY28285 | Canola | cytosol | 45.61 | 50.67 |
| CDX68956 | Canola | cytosol | 49.85 | 50.56 |
| CDY45032 | Canola | nucleus | 44.2 | 50.23 |
Protein Annotations
| Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A1Z5S7E0 | InterPro:F-box_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0010252 | GO:GO:1905393 |
| InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt_Cys-con_subtyp | EnsemblPlants:OQU91850 | ProteinID:OQU91850 |
| ProteinID:OQU91850.1 | PFAM:PF12937 | PANTHER:PTHR44842 | SMART:SM00256 | SMART:SM00367 | EnsemblPlantsGene:SORBI_3001G257300 |
| SUPFAM:SSF52047 | UniParc:UPI000B8B9997 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:30373901..30383397
Molecular Weight (calculated)
108087.0 Da
IEP (calculated)
5.101
GRAVY (calculated)
0.075
Length
991 amino acids
Sequence
(BLAST)
(BLAST)
001: MADGGRMKGV QGAGGGAGDE GEGNEEAREE LELALSLGRR GWHLPPRQEP APRSLNWTAV LPEWNPDAAG SSQVAERALG GQSISSLAFH DMLGEDEDRD
101: LQNKRLRVRR FGEESPLHSG ASATPFGSES SFLPISEECV HLKLSRFPEH ELEFGLSLFP NDGSESPRDA NNEKVDDAEN SGGRNSEDVG IRMDLSDDLL
201: HLIFSFLGQK DLCRAGVTCK QWRSASVHDD FWKCLKFENT RISLQNFVNI CRRYPSVTEL NLHGVINAET LVLEAIMFLR HLKTLTMGKG QLGEAFFLAL
301: AECPLLTALT VTDASLGSGI QEVTVNHDGL RELHILKCRA LRISVRCSQL QILSLRRTGM AHVSLNCPQL LELDFQSCHK LSDNAIRQAA TACPLLAKLD
401: MSSCSCVTDE TLRDIASSCP SLSVLDASNC PNISFESVRL PMLIDLRLLS CEGITSASMA AIAYSRLLEA LQLDNCSLLT SVSLDLPHLK NISLVHLRKF
501: ADLNLRSPVL SYIKVSRCSA LHRVSITSTT LQKLVLQKQE SLSNLSLQCH NLIDVDLSDC ESLTNAICEV FSDGGGCPML RSLILDNCES LSIVELNSSS
601: LACLSLAGCR SMTFLRLSCP NLQHVNLDGC DHLQSAAFCP VGLESLNLGI CPKLSVLRIE APNMSILELK GCGVLSEASI NCPRLTSLDA SFCRQLVDDS
701: LTRMAEACPL IEHLILSSCL SIGIDGLSSL HCLHKLTLLD LSYTFLINLK PVFDSCPQLR VLKLSACKYL SDSSLDALYR EGALPLLVEL DLSYSSIGQN
801: AIEDLLACCT NLVNVNLNGC TNFQELVCGS DDSSSVDMPV DFCPPSSSPI KSEEISERSG RLLEVLSCTG CPNIKKVVIP SIANFLHLSK ISLNLSTNLK
901: EVDLTCSNLF MLNLSNCSSL EVLKLDCPRL TNLQLLACTM LQEEELESAI SRCSALEILN VHSCPKINAL DFGRLRLVCP SLKRIQSSLI S
101: LQNKRLRVRR FGEESPLHSG ASATPFGSES SFLPISEECV HLKLSRFPEH ELEFGLSLFP NDGSESPRDA NNEKVDDAEN SGGRNSEDVG IRMDLSDDLL
201: HLIFSFLGQK DLCRAGVTCK QWRSASVHDD FWKCLKFENT RISLQNFVNI CRRYPSVTEL NLHGVINAET LVLEAIMFLR HLKTLTMGKG QLGEAFFLAL
301: AECPLLTALT VTDASLGSGI QEVTVNHDGL RELHILKCRA LRISVRCSQL QILSLRRTGM AHVSLNCPQL LELDFQSCHK LSDNAIRQAA TACPLLAKLD
401: MSSCSCVTDE TLRDIASSCP SLSVLDASNC PNISFESVRL PMLIDLRLLS CEGITSASMA AIAYSRLLEA LQLDNCSLLT SVSLDLPHLK NISLVHLRKF
501: ADLNLRSPVL SYIKVSRCSA LHRVSITSTT LQKLVLQKQE SLSNLSLQCH NLIDVDLSDC ESLTNAICEV FSDGGGCPML RSLILDNCES LSIVELNSSS
601: LACLSLAGCR SMTFLRLSCP NLQHVNLDGC DHLQSAAFCP VGLESLNLGI CPKLSVLRIE APNMSILELK GCGVLSEASI NCPRLTSLDA SFCRQLVDDS
701: LTRMAEACPL IEHLILSSCL SIGIDGLSSL HCLHKLTLLD LSYTFLINLK PVFDSCPQLR VLKLSACKYL SDSSLDALYR EGALPLLVEL DLSYSSIGQN
801: AIEDLLACCT NLVNVNLNGC TNFQELVCGS DDSSSVDMPV DFCPPSSSPI KSEEISERSG RLLEVLSCTG CPNIKKVVIP SIANFLHLSK ISLNLSTNLK
901: EVDLTCSNLF MLNLSNCSSL EVLKLDCPRL TNLQLLACTM LQEEELESAI SRCSALEILN VHSCPKINAL DFGRLRLVCP SLKRIQSSLI S
001: MRIWCFSCFT DEDEDEEDDN GGRVKKQSLA TAMDNSNGDG DFVNFGENER APRVPRWRLR LCAEESEAAW AELDRFWTSE IPLNQLVQGE SSSNVVAEAE
101: DCTMEEADHD SYHKRAKVYS GLAECRSVSG VSSDAGNSVS SVERTVSFGI ASSSRTDTDM FCQNFILNYN RKDGKKDDGD DNGSSDTEDF EVHIDLTDDL
201: LHMVFSFLNH VDLCRSAMVC RQWRVASAHE DFWRVLNFEN IRISMEQFEN MCSRYPNATE VNVYGAPAVN ALAMKAATTL RNLEVLTIGK GHISESFFQA
301: LGECNMLRSV TVSDAILGNG AQEIHLSHDR LRELKITKCR VMRLSIRCPQ LRSLSLKRSN MSQAMLNCPL LQLLDIASCH KLLDAAIRSA AISCPQLESL
401: DVSNCSCVSD ETLREIAQAC ANLHILNASY CPNISLESVH LPMLTVLKLH SCEGITSASM TWIANSPALE VLELDNCNLL TTVSLHLSRL QSISLVHCRK
501: FTDLNLQSIM LSSITVSNCP ALRRITITSN ALRRLALQKQ ENLTTLVLQC HSLQEVDLSD CESLSNSVCK IFSDDGGCPM LKSLILDNCE SLTAVRFCNS
601: SLASLSLVGC RAVTSLELKC PRIEQICLDG CDHLETAFFQ PVALRSLNLG ICPKLSVLNI EAPYMVSLEL KGCGVLSEAS IMCPLLTSLD ASFCSQLRDD
701: CLSATTASCP LIESLVLMSC PSIGSDGLSS LNGLPNLTVL DLSYTFLMNL EPVFKSCIQL KVLKLQACKY LTDSSLEPLY KEGALPALEE LDLSYGTLCQ
801: TAIDDLLACC THLTHLSLNG CVNMHDLDWG STSVHLFDYF GVYSSSDNTQ EPAETANRLL QNLNCVGCPN IRKVLIPPAA RFYHLSTLNL SLSVNLKEVD
901: LTCSNLVLLN LSNCCSLEVL KLGCPRLASL FLQSCNMDEA GVEAAISGCS SLETLDLRFC PKISSVSMSK FRTVCPSLKR VFSSPNLLQD
101: DCTMEEADHD SYHKRAKVYS GLAECRSVSG VSSDAGNSVS SVERTVSFGI ASSSRTDTDM FCQNFILNYN RKDGKKDDGD DNGSSDTEDF EVHIDLTDDL
201: LHMVFSFLNH VDLCRSAMVC RQWRVASAHE DFWRVLNFEN IRISMEQFEN MCSRYPNATE VNVYGAPAVN ALAMKAATTL RNLEVLTIGK GHISESFFQA
301: LGECNMLRSV TVSDAILGNG AQEIHLSHDR LRELKITKCR VMRLSIRCPQ LRSLSLKRSN MSQAMLNCPL LQLLDIASCH KLLDAAIRSA AISCPQLESL
401: DVSNCSCVSD ETLREIAQAC ANLHILNASY CPNISLESVH LPMLTVLKLH SCEGITSASM TWIANSPALE VLELDNCNLL TTVSLHLSRL QSISLVHCRK
501: FTDLNLQSIM LSSITVSNCP ALRRITITSN ALRRLALQKQ ENLTTLVLQC HSLQEVDLSD CESLSNSVCK IFSDDGGCPM LKSLILDNCE SLTAVRFCNS
601: SLASLSLVGC RAVTSLELKC PRIEQICLDG CDHLETAFFQ PVALRSLNLG ICPKLSVLNI EAPYMVSLEL KGCGVLSEAS IMCPLLTSLD ASFCSQLRDD
701: CLSATTASCP LIESLVLMSC PSIGSDGLSS LNGLPNLTVL DLSYTFLMNL EPVFKSCIQL KVLKLQACKY LTDSSLEPLY KEGALPALEE LDLSYGTLCQ
801: TAIDDLLACC THLTHLSLNG CVNMHDLDWG STSVHLFDYF GVYSSSDNTQ EPAETANRLL QNLNCVGCPN IRKVLIPPAA RFYHLSTLNL SLSVNLKEVD
901: LTCSNLVLLN LSNCCSLEVL KLGCPRLASL FLQSCNMDEA GVEAAISGCS SLETLDLRFC PKISSVSMSK FRTVCPSLKR VFSSPNLLQD
Arabidopsis Description
FBL15SLOMO [Source:UniProtKB/TrEMBL;Acc:A0A178V148]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.