Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d000055_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G33210.1 | Zm00001d000055_P001 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU91850 | Sorghum | cytosol | 81.37 | 86.38 |
| Os10t0396400-01 | Rice | mitochondrion | 50.19 | 80.73 |
| Zm00001d033037_P008 | Maize | cytosol | 76.52 | 76.38 |
| TraesCS1A01G136200.1 | Wheat | cytosol | 66.54 | 72.61 |
| TraesCS1B01G154100.1 | Wheat | cytosol | 68.92 | 71.36 |
| TraesCS1D01G136800.4 | Wheat | cytosol | 68.54 | 70.96 |
| GSMUA_Achr7P11390_001 | Banana | cytosol | 51.81 | 61.65 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, vacuole | 40.78 | 59.67 |
| Bra011427.1-P | Field mustard | cytosol | 34.22 | 54.55 |
| KRH52245 | Soybean | nucleus | 45.72 | 53.86 |
| KRH61576 | Soybean | nucleus | 43.92 | 51.39 |
| KRH05410 | Soybean | cytosol | 47.62 | 51.02 |
| CDY28286 | Canola | nucleus | 42.4 | 50.97 |
| KRH15607 | Soybean | cytosol | 47.05 | 50.77 |
| VIT_04s0008g01890.t01 | Wine grape | nucleus | 47.34 | 50.25 |
| PGSC0003DMT400048411 | Potato | cytosol | 45.72 | 50.1 |
| Bra034552.1-P | Field mustard | nucleus | 40.49 | 50.0 |
| CDX75339 | Canola | cytosol | 45.34 | 49.33 |
| Solyc08g061820.2.1 | Tomato | cytosol | 45.82 | 49.13 |
| CDY45031 | Canola | cytosol | 41.54 | 49.1 |
| Bra034551.1-P | Field mustard | cytosol | 41.35 | 48.88 |
| CDY28285 | Canola | cytosol | 41.35 | 48.77 |
| CDY45032 | Canola | nucleus | 40.4 | 48.74 |
| CDX68956 | Canola | cytosol | 45.15 | 48.62 |
| CDY46126 | Canola | cytosol | 45.25 | 48.52 |
| Bra037014.1-P | Field mustard | nucleus | 45.34 | 48.38 |
| AT4G33210.1 | Thale cress | cytosol | 45.25 | 48.08 |
Protein Annotations
| Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A1D6GR33 | ProteinID:AQK65590.1 | InterPro:F-box_dom |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt_Cys-con_subtyp | PFAM:PF12937 | PANTHER:PTHR44842 |
| SMART:SM00256 | SMART:SM00367 | SUPFAM:SSF52047 | TMHMM:TMhelix | UniParc:UPI00084410E6 | EnsemblPlantsGene:Zm00001d014232 |
| EnsemblPlants:Zm00001d014232_P014 | EnsemblPlants:Zm00001d014232_T014 | SEG:seg | : | : | : |
Description
F-box/LRR-repeat protein 15
Coordinates
chr5:-:37307558..37319723
Molecular Weight (calculated)
114918.0 Da
IEP (calculated)
4.978
GRAVY (calculated)
0.093
Length
1052 amino acids
Sequence
(BLAST)
(BLAST)
0001: MANEGRMKGV QGVGGGTGDE EDGNEEVREE LELALSLGWR SWHLPPRQEP APSSHNWTAV LPEWNPDAAG SSHDAKTALG GQSIPSLRFR DMLGGILDAS
0101: HAGGSVEVGW GNLDEEDEDR DLQNKRLRVQ HFGEESPLHS GASATPFDSK LTFLPISDEC VHLKLSCLPE HELEFGLSLF PNDGSESLRD ANNEIVDDAE
0201: NPGERNSEGV GIRMDLSDDL LHLIFSFLGQ KDLCRAGVTC KQWRSASVHD DFWKCLKFEN TRISLQNFVN ICRRYPSVTE LNLNGVINAE MLVLEAIVFL
0301: RHLKTLTMGK GQLGGPFFQA LSECPLLTAL TVNDASLGSG IQEATIKHGG LRELHIFKCR ALRISVRCSQ LQILSLRRTG MAHVSLNCPQ LLELDFQSCH
0401: KLSDNAIRQA ATACPLLAKL DMSSCSCVTD ETLRDIGNSC PSLSALDASN CPNISFESVK LPMLVDLRLL SCEGITSASM VAIAYSRLLE ALQLDNCSLL
0501: TSVSLDLPHL KNMSLVHLRK FAELNLRSPV LSYIKVSRCS VLHRVSITST TLQKLVLQKQ ESLSSLSLQC HNLIDVDLSD CESLTNAICE VFSDGGGCPK
0601: LRSLILDNCE SLSIVELNSS SLVCLSLAGC RSMTCLRLSC PNLQHVNLDG CDHLKNAAFC PVGLESLNLG ICPKLSILCI EAPNMSIMEL KGCGVLSEAS
0701: INCPRLTSLD ASFCRQLVDD SLTCMTGACP LIEHLILSSC LSIGIDGLSS LHCLHKLTLL DLSYTFLINL KPIFDSCPQL KVLKLSACKY LSDSSLDALY
0801: REGALPLLVE LDLSYSPIEQ NAIEGLLACC SNLVNVNFNG CTNFQELVCE SGDSGSVDMP VDSCPPSSPI KNEEISEQPG RLLEVLNCTG CPNIKKVVIP
0901: LIANFSHLSK INLNLSTNLK EVDLTCSNLL TLNLSNCSSL EVLKLDCPRL TNLQLLACTM LQEEEFDERS KSGKALLDAL CTYYPSIAGI LQARGNVVLF
1001: IQSIHGSVIS TFFLQICFVA GDSKISVHVC LSLFLGVYQW SYQMYMLVYM HQ
0101: HAGGSVEVGW GNLDEEDEDR DLQNKRLRVQ HFGEESPLHS GASATPFDSK LTFLPISDEC VHLKLSCLPE HELEFGLSLF PNDGSESLRD ANNEIVDDAE
0201: NPGERNSEGV GIRMDLSDDL LHLIFSFLGQ KDLCRAGVTC KQWRSASVHD DFWKCLKFEN TRISLQNFVN ICRRYPSVTE LNLNGVINAE MLVLEAIVFL
0301: RHLKTLTMGK GQLGGPFFQA LSECPLLTAL TVNDASLGSG IQEATIKHGG LRELHIFKCR ALRISVRCSQ LQILSLRRTG MAHVSLNCPQ LLELDFQSCH
0401: KLSDNAIRQA ATACPLLAKL DMSSCSCVTD ETLRDIGNSC PSLSALDASN CPNISFESVK LPMLVDLRLL SCEGITSASM VAIAYSRLLE ALQLDNCSLL
0501: TSVSLDLPHL KNMSLVHLRK FAELNLRSPV LSYIKVSRCS VLHRVSITST TLQKLVLQKQ ESLSSLSLQC HNLIDVDLSD CESLTNAICE VFSDGGGCPK
0601: LRSLILDNCE SLSIVELNSS SLVCLSLAGC RSMTCLRLSC PNLQHVNLDG CDHLKNAAFC PVGLESLNLG ICPKLSILCI EAPNMSIMEL KGCGVLSEAS
0701: INCPRLTSLD ASFCRQLVDD SLTCMTGACP LIEHLILSSC LSIGIDGLSS LHCLHKLTLL DLSYTFLINL KPIFDSCPQL KVLKLSACKY LSDSSLDALY
0801: REGALPLLVE LDLSYSPIEQ NAIEGLLACC SNLVNVNFNG CTNFQELVCE SGDSGSVDMP VDSCPPSSPI KNEEISEQPG RLLEVLNCTG CPNIKKVVIP
0901: LIANFSHLSK INLNLSTNLK EVDLTCSNLL TLNLSNCSSL EVLKLDCPRL TNLQLLACTM LQEEEFDERS KSGKALLDAL CTYYPSIAGI LQARGNVVLF
1001: IQSIHGSVIS TFFLQICFVA GDSKISVHVC LSLFLGVYQW SYQMYMLVYM HQ
001: MRIWCFSCFT DEDEDEEDDN GGRVKKQSLA TAMDNSNGDG DFVNFGENER APRVPRWRLR LCAEESEAAW AELDRFWTSE IPLNQLVQGE SSSNVVAEAE
101: DCTMEEADHD SYHKRAKVYS GLAECRSVSG VSSDAGNSVS SVERTVSFGI ASSSRTDTDM FCQNFILNYN RKDGKKDDGD DNGSSDTEDF EVHIDLTDDL
201: LHMVFSFLNH VDLCRSAMVC RQWRVASAHE DFWRVLNFEN IRISMEQFEN MCSRYPNATE VNVYGAPAVN ALAMKAATTL RNLEVLTIGK GHISESFFQA
301: LGECNMLRSV TVSDAILGNG AQEIHLSHDR LRELKITKCR VMRLSIRCPQ LRSLSLKRSN MSQAMLNCPL LQLLDIASCH KLLDAAIRSA AISCPQLESL
401: DVSNCSCVSD ETLREIAQAC ANLHILNASY CPNISLESVH LPMLTVLKLH SCEGITSASM TWIANSPALE VLELDNCNLL TTVSLHLSRL QSISLVHCRK
501: FTDLNLQSIM LSSITVSNCP ALRRITITSN ALRRLALQKQ ENLTTLVLQC HSLQEVDLSD CESLSNSVCK IFSDDGGCPM LKSLILDNCE SLTAVRFCNS
601: SLASLSLVGC RAVTSLELKC PRIEQICLDG CDHLETAFFQ PVALRSLNLG ICPKLSVLNI EAPYMVSLEL KGCGVLSEAS IMCPLLTSLD ASFCSQLRDD
701: CLSATTASCP LIESLVLMSC PSIGSDGLSS LNGLPNLTVL DLSYTFLMNL EPVFKSCIQL KVLKLQACKY LTDSSLEPLY KEGALPALEE LDLSYGTLCQ
801: TAIDDLLACC THLTHLSLNG CVNMHDLDWG STSVHLFDYF GVYSSSDNTQ EPAETANRLL QNLNCVGCPN IRKVLIPPAA RFYHLSTLNL SLSVNLKEVD
901: LTCSNLVLLN LSNCCSLEVL KLGCPRLASL FLQSCNMDEA GVEAAISGCS SLETLDLRFC PKISSVSMSK FRTVCPSLKR VFSSPNLLQD
101: DCTMEEADHD SYHKRAKVYS GLAECRSVSG VSSDAGNSVS SVERTVSFGI ASSSRTDTDM FCQNFILNYN RKDGKKDDGD DNGSSDTEDF EVHIDLTDDL
201: LHMVFSFLNH VDLCRSAMVC RQWRVASAHE DFWRVLNFEN IRISMEQFEN MCSRYPNATE VNVYGAPAVN ALAMKAATTL RNLEVLTIGK GHISESFFQA
301: LGECNMLRSV TVSDAILGNG AQEIHLSHDR LRELKITKCR VMRLSIRCPQ LRSLSLKRSN MSQAMLNCPL LQLLDIASCH KLLDAAIRSA AISCPQLESL
401: DVSNCSCVSD ETLREIAQAC ANLHILNASY CPNISLESVH LPMLTVLKLH SCEGITSASM TWIANSPALE VLELDNCNLL TTVSLHLSRL QSISLVHCRK
501: FTDLNLQSIM LSSITVSNCP ALRRITITSN ALRRLALQKQ ENLTTLVLQC HSLQEVDLSD CESLSNSVCK IFSDDGGCPM LKSLILDNCE SLTAVRFCNS
601: SLASLSLVGC RAVTSLELKC PRIEQICLDG CDHLETAFFQ PVALRSLNLG ICPKLSVLNI EAPYMVSLEL KGCGVLSEAS IMCPLLTSLD ASFCSQLRDD
701: CLSATTASCP LIESLVLMSC PSIGSDGLSS LNGLPNLTVL DLSYTFLMNL EPVFKSCIQL KVLKLQACKY LTDSSLEPLY KEGALPALEE LDLSYGTLCQ
801: TAIDDLLACC THLTHLSLNG CVNMHDLDWG STSVHLFDYF GVYSSSDNTQ EPAETANRLL QNLNCVGCPN IRKVLIPPAA RFYHLSTLNL SLSVNLKEVD
901: LTCSNLVLLN LSNCCSLEVL KLGCPRLASL FLQSCNMDEA GVEAAISGCS SLETLDLRFC PKISSVSMSK FRTVCPSLKR VFSSPNLLQD
Arabidopsis Description
FBL15SLOMO [Source:UniProtKB/TrEMBL;Acc:A0A178V148]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.