Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc04g008430.1.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G33210.1 | Solyc04g008430.1.1 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400048411 | Potato | cytosol | 95.31 | 97.4 |
| KRH52245 | Soybean | nucleus | 61.57 | 67.64 |
| Bra011427.1-P | Field mustard | cytosol | 45.46 | 67.58 |
| VIT_04s0008g01890.t01 | Wine grape | nucleus | 67.28 | 66.6 |
| KRH15607 | Soybean | cytosol | 64.63 | 65.03 |
| KRH61576 | Soybean | nucleus | 59.23 | 64.63 |
| KRH05410 | Soybean | cytosol | 63.81 | 63.75 |
| Os10t0396400-01 | Rice | mitochondrion | 41.79 | 62.69 |
| CDX75339 | Canola | cytosol | 60.86 | 61.74 |
| CDX68956 | Canola | cytosol | 61.16 | 61.41 |
| CDY46126 | Canola | cytosol | 61.16 | 61.16 |
| AT4G33210.1 | Thale cress | cytosol | 61.57 | 61.01 |
| Bra037014.1-P | Field mustard | nucleus | 60.96 | 60.65 |
| CDY28286 | Canola | nucleus | 54.03 | 60.57 |
| Bra034552.1-P | Field mustard | nucleus | 51.89 | 59.74 |
| Bra034551.1-P | Field mustard | cytosol | 52.91 | 58.31 |
| CDY28285 | Canola | cytosol | 53.01 | 58.3 |
| CDY45032 | Canola | nucleus | 51.78 | 58.26 |
| CDY45031 | Canola | cytosol | 52.5 | 57.87 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, vacuole | 41.79 | 57.02 |
| GSMUA_Achr7P11390_001 | Banana | cytosol | 50.05 | 55.54 |
| OQU91850 | Sorghum | cytosol | 51.48 | 50.96 |
| TraesCS1B01G154100.1 | Wheat | cytosol | 51.89 | 50.1 |
| TraesCS1D01G136800.4 | Wheat | cytosol | 51.48 | 49.7 |
| TraesCS1A01G136200.1 | Wheat | cytosol | 48.73 | 49.59 |
| Zm00001d014232_P014 | Maize | cytosol | 49.13 | 45.82 |
| Zm00001d033037_P008 | Maize | cytosol | 47.71 | 44.4 |
Protein Annotations
| Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 | MapMan:35.1 | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0010252 | GO:GO:1905393 | InterPro:IPR001810 |
| InterPro:IPR032675 | UniProt:K4CKX1 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt_Cys-con_subtyp | PFAM:PF12937 | PFscan:PS50181 |
| PANTHER:PTHR44842 | SMART:SM00256 | SMART:SM00367 | SUPFAM:SSF52047 | SUPFAM:SSF52058 | EnsemblPlantsGene:Solyc08g061820.2 |
| EnsemblPlants:Solyc08g061820.2.1 | UniParc:UPI000276AEB6 | SEG:seg | : | : | : |
Description
F-box/LRR-repeat protein 15 [Source:Projected from Arabidopsis thaliana (AT4G33210) UniProtKB/Swiss-Prot;Acc:Q9SMY8]
Coordinates
chr8:-:49553831..49563378
Molecular Weight (calculated)
107416.0 Da
IEP (calculated)
4.625
GRAVY (calculated)
0.103
Length
981 amino acids
Sequence
(BLAST)
(BLAST)
001: MRIWCCLCFG EEEDNKKGYK SMRDPILGNN GDESPDENSA FDWRNVFEGV NVAAVVSPQA GAVGDLGVPK NEEIDFDSNW TSSTVEVKNE SYSGEKMLDV
101: NLNLGLSGEA SSSTVLKEDS DPFTCSKRPK VNSFSLDWDN HLLQETSYLC PMNEGGGDVS LSNLLGATDD EGKDSKMEDL DVRMDLTDDL LHMVFSFLDH
201: IDLCRAASVC SQWRAASSHE DFWRYLNFEN KQISSNQFED MCRRYPNATT INLYGTPNIH PLAMKAVSSL RNLETLSLGR GQLGETFFQA LTDCHVLRSL
301: TINDATLGNG IQEIPISHDS LRLLQLVKCR VLRVSIRCPQ LETLSLKRSS MPHAVLNCPL LHDLDIASCH KLSDAAIRSA ATACPLLESL DMSNCSCVSD
401: ETLRDIAQTC GHLRVLDASY CPNISLESVR LVMLTVLKLH SCEGITSASM AAIAHSYMLE VLELDNCSLL TSVSLDLPRL QSIRLVHCRK FIDLNLHCGM
501: LSSITVSNCP LLQRINITSS ALKKLVLQKQ ESLTTIALQC PNLLEVDLTE CESLTNSVCE VFSDGGGCPV LKSLVLDNCE SLTLVAFCST SLVSLSLGGC
601: RALISLALRC PYLEQVSLDG CDHLEVASFC PVGLRSLNLG ICPKMNMLHI EAPQMASLEL KGCGVLSEAS INCPLLTSFD ASFCSQLKDD CLSATTSSCP
701: LIESLVLMSC PSVGCDGLLS LQSLPNLTYL DLSYTFLVTL QPVYESCLQL KVLKLQACKY LTDTSLEPLY KENALPALCE LDLSYGTLCQ SAIEELLACC
801: THLSHVSLNG CINMHDLNWG FSGDQLSQIP SVSIPHVSSL GEQQLSNEQP KRLLENLNCV GCPNIKKVLI PMAQGFLLSS LNLSLSGNLK EVDIACYNLC
901: VLNLSNCCSL ESLQLECPRL SSLFLQSCNV DEESVEAAVS RCMMLETLDV RFCPKICPLN MTRLRVACPS LKRIFSSLVP S
101: NLNLGLSGEA SSSTVLKEDS DPFTCSKRPK VNSFSLDWDN HLLQETSYLC PMNEGGGDVS LSNLLGATDD EGKDSKMEDL DVRMDLTDDL LHMVFSFLDH
201: IDLCRAASVC SQWRAASSHE DFWRYLNFEN KQISSNQFED MCRRYPNATT INLYGTPNIH PLAMKAVSSL RNLETLSLGR GQLGETFFQA LTDCHVLRSL
301: TINDATLGNG IQEIPISHDS LRLLQLVKCR VLRVSIRCPQ LETLSLKRSS MPHAVLNCPL LHDLDIASCH KLSDAAIRSA ATACPLLESL DMSNCSCVSD
401: ETLRDIAQTC GHLRVLDASY CPNISLESVR LVMLTVLKLH SCEGITSASM AAIAHSYMLE VLELDNCSLL TSVSLDLPRL QSIRLVHCRK FIDLNLHCGM
501: LSSITVSNCP LLQRINITSS ALKKLVLQKQ ESLTTIALQC PNLLEVDLTE CESLTNSVCE VFSDGGGCPV LKSLVLDNCE SLTLVAFCST SLVSLSLGGC
601: RALISLALRC PYLEQVSLDG CDHLEVASFC PVGLRSLNLG ICPKMNMLHI EAPQMASLEL KGCGVLSEAS INCPLLTSFD ASFCSQLKDD CLSATTSSCP
701: LIESLVLMSC PSVGCDGLLS LQSLPNLTYL DLSYTFLVTL QPVYESCLQL KVLKLQACKY LTDTSLEPLY KENALPALCE LDLSYGTLCQ SAIEELLACC
801: THLSHVSLNG CINMHDLNWG FSGDQLSQIP SVSIPHVSSL GEQQLSNEQP KRLLENLNCV GCPNIKKVLI PMAQGFLLSS LNLSLSGNLK EVDIACYNLC
901: VLNLSNCCSL ESLQLECPRL SSLFLQSCNV DEESVEAAVS RCMMLETLDV RFCPKICPLN MTRLRVACPS LKRIFSSLVP S
001: MRIWCFSCFT DEDEDEEDDN GGRVKKQSLA TAMDNSNGDG DFVNFGENER APRVPRWRLR LCAEESEAAW AELDRFWTSE IPLNQLVQGE SSSNVVAEAE
101: DCTMEEADHD SYHKRAKVYS GLAECRSVSG VSSDAGNSVS SVERTVSFGI ASSSRTDTDM FCQNFILNYN RKDGKKDDGD DNGSSDTEDF EVHIDLTDDL
201: LHMVFSFLNH VDLCRSAMVC RQWRVASAHE DFWRVLNFEN IRISMEQFEN MCSRYPNATE VNVYGAPAVN ALAMKAATTL RNLEVLTIGK GHISESFFQA
301: LGECNMLRSV TVSDAILGNG AQEIHLSHDR LRELKITKCR VMRLSIRCPQ LRSLSLKRSN MSQAMLNCPL LQLLDIASCH KLLDAAIRSA AISCPQLESL
401: DVSNCSCVSD ETLREIAQAC ANLHILNASY CPNISLESVH LPMLTVLKLH SCEGITSASM TWIANSPALE VLELDNCNLL TTVSLHLSRL QSISLVHCRK
501: FTDLNLQSIM LSSITVSNCP ALRRITITSN ALRRLALQKQ ENLTTLVLQC HSLQEVDLSD CESLSNSVCK IFSDDGGCPM LKSLILDNCE SLTAVRFCNS
601: SLASLSLVGC RAVTSLELKC PRIEQICLDG CDHLETAFFQ PVALRSLNLG ICPKLSVLNI EAPYMVSLEL KGCGVLSEAS IMCPLLTSLD ASFCSQLRDD
701: CLSATTASCP LIESLVLMSC PSIGSDGLSS LNGLPNLTVL DLSYTFLMNL EPVFKSCIQL KVLKLQACKY LTDSSLEPLY KEGALPALEE LDLSYGTLCQ
801: TAIDDLLACC THLTHLSLNG CVNMHDLDWG STSVHLFDYF GVYSSSDNTQ EPAETANRLL QNLNCVGCPN IRKVLIPPAA RFYHLSTLNL SLSVNLKEVD
901: LTCSNLVLLN LSNCCSLEVL KLGCPRLASL FLQSCNMDEA GVEAAISGCS SLETLDLRFC PKISSVSMSK FRTVCPSLKR VFSSPNLLQD
101: DCTMEEADHD SYHKRAKVYS GLAECRSVSG VSSDAGNSVS SVERTVSFGI ASSSRTDTDM FCQNFILNYN RKDGKKDDGD DNGSSDTEDF EVHIDLTDDL
201: LHMVFSFLNH VDLCRSAMVC RQWRVASAHE DFWRVLNFEN IRISMEQFEN MCSRYPNATE VNVYGAPAVN ALAMKAATTL RNLEVLTIGK GHISESFFQA
301: LGECNMLRSV TVSDAILGNG AQEIHLSHDR LRELKITKCR VMRLSIRCPQ LRSLSLKRSN MSQAMLNCPL LQLLDIASCH KLLDAAIRSA AISCPQLESL
401: DVSNCSCVSD ETLREIAQAC ANLHILNASY CPNISLESVH LPMLTVLKLH SCEGITSASM TWIANSPALE VLELDNCNLL TTVSLHLSRL QSISLVHCRK
501: FTDLNLQSIM LSSITVSNCP ALRRITITSN ALRRLALQKQ ENLTTLVLQC HSLQEVDLSD CESLSNSVCK IFSDDGGCPM LKSLILDNCE SLTAVRFCNS
601: SLASLSLVGC RAVTSLELKC PRIEQICLDG CDHLETAFFQ PVALRSLNLG ICPKLSVLNI EAPYMVSLEL KGCGVLSEAS IMCPLLTSLD ASFCSQLRDD
701: CLSATTASCP LIESLVLMSC PSIGSDGLSS LNGLPNLTVL DLSYTFLMNL EPVFKSCIQL KVLKLQACKY LTDSSLEPLY KEGALPALEE LDLSYGTLCQ
801: TAIDDLLACC THLTHLSLNG CVNMHDLDWG STSVHLFDYF GVYSSSDNTQ EPAETANRLL QNLNCVGCPN IRKVLIPPAA RFYHLSTLNL SLSVNLKEVD
901: LTCSNLVLLN LSNCCSLEVL KLGCPRLASL FLQSCNMDEA GVEAAISGCS SLETLDLRFC PKISSVSMSK FRTVCPSLKR VFSSPNLLQD
Arabidopsis Description
FBL15SLOMO [Source:UniProtKB/TrEMBL;Acc:A0A178V148]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.