CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH42483
KRH58580

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33210.1	KRH42483	AT2G01950.1	19000166
AT4G33210.1	KRH58580	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05410	Soybean	cytosol	87.9	87.27
KRH52245	Soybean	nucleus	72.41	79.06
KRH61576	Soybean	nucleus	70.05	75.97
Bra011427.1-P	Field mustard	cytosol	46.36	68.48
VIT_04s0008g01890.t01	Wine grape	nucleus	68.41	67.31
PGSC0003DMT400048411	Potato	cytosol	64.92	65.94
Solyc08g061820.2.1	Tomato	cytosol	65.03	64.63
Os10t0396400-01	Rice	mitochondrion	42.56	63.46
CDX75339	Canola	cytosol	62.56	63.08
CDX68956	Canola	cytosol	62.36	62.23
AT4G33210.1	Thale cress	cytosol	62.46	61.52
CDY46126	Canola	cytosol	61.13	60.75
Bra037014.1-P	Field mustard	nucleus	61.13	60.45
CDY28286	Canola	nucleus	53.74	59.89
Bra034552.1-P	Field mustard	nucleus	51.49	58.92
GSMUA_Achr11P...	Banana	cytosol, nucleus, vacuole	43.08	58.41
CDY28285	Canola	cytosol	52.51	57.4
GSMUA_Achr7P11390_001	Banana	cytosol	52.0	57.35
CDY45032	Canola	nucleus	51.18	57.22
CDY45031	Canola	cytosol	52.0	56.97
Bra034551.1-P	Field mustard	cytosol	51.79	56.74
OQU91850	Sorghum	cytosol	52.62	51.77
TraesCS1B01G154100.1	Wheat	cytosol	52.41	50.3
TraesCS1D01G136800.4	Wheat	cytosol	52.31	50.2
TraesCS1A01G136200.1	Wheat	cytosol	49.33	49.9
Zm00001d014232_P014	Maize	cytosol	50.77	47.05
Zm00001d033037_P008	Maize	cytosol	48.51	44.88

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:100782842	Gene3D:3.80.10.10	MapMan:35.1	EMBL:ACUP02008620	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	EnsemblPlantsGene:GLYMA_14G098900	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1M955
InterPro:IPR001810	InterPro:IPR032675	EnsemblPlants:KRH15607	ProteinID:KRH15607	ProteinID:KRH15607.1	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt_Cys-con_subtyp	PFAM:PF12937	PFscan:PS50181	PANTHER:PTHR44842	SMART:SM00256	SMART:SM00367
SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF81383	UniParc:UPI000233BB1B	SEG:seg	:

Description

hypothetical protein

Coordinates

chr14:-:9438996..9446823

Molecular Weight (calculated)

106815.0 Da

IEP (calculated)

4.814

GRAVY (calculated)

0.052

Length

975 amino acids

Sequence
(BLAST)

001: MKLWCFPWLC FTEEEEEERN VPKPMKEDDI FGNDVVSDDD DDGNNTRGGD DEQFATARTD ALGSWPGESS STAAAACSET PAAGGESRDS SHKRAKFYAD
101: FEERNFSTHA GKCGASNEYG DYDHIKGTLR PNGETCYDAF ALMGAVEESS SGFDSSIVKE GEGDDSDISK VEDVEVRMDL TDDLLHMVFS FLDHPNLCKA
201: ARICKQWRGA SAHEDFWKSL NFEDRNISVE QFEDMCRRYP NATAVSISGS AIYLLVMKAI CSLRNLEVLT LGRGQIADTF FHALADCSML RRLNINDSTL
301: GNGIQEITIN HDRLCHLQLT KCRVMRIAVR CPQLETMSLK RSNMAQVVLN CPLLHELDIG SCHKLPDAAI RAAATSCPQL VSLDMSNCSC VSDETLREIA
401: LSCANLSFLD ASYCSNISLE SVRLPMLTVL KLHSCEGITS ASMAAIAHSY MLEVLELDNC SLLTSVSLDL PRLQTIRLVH CRKFADLNLR TMMLSSILVS
501: NCPALHRINI TSNSLQKLAL QKQDSLTTLA LQCQSLQEVD LSECESLTNS ICDVFSDGGG CPMLKSLVLD NCESLESVRF ISTTLVSLSL GGCRAITALE
601: LTCPNLEKVI LDGCDHLEKA SFCPVGLRSL NLGICPKLNI LSIEAMFMVS LELKGCGVLS EASLNCPLLT SLDASFCSQL TDECLSATTA SCPLIESLIL
701: MSCPSIGLDG LCSLRRLPNL TLLDLSYTFL VNLQPVFESC SQLKVLKLQA CKYLTDSSLE PLYKGALPAL QELDLSYGTL CQSAIEELLS CCRHLTRVSL
801: NGCANMHDLN WGCSRGHIAE LPGVNVLSIA TSHENVHKLS EQPTRLLQNL NCVGCPNIRK VFIPSTAHCS RLLFLNLSLS ANLKEVDVAC LNLSWLNLSN
901: CSSLEVLKLE CPRLTSLFLQ SCNIDEEAVE AAISKCTMLE TLDVRFCPKI CSMSMGRLRA ACSSLKRIFS SLSSS

Best Arabidopsis Sequence Match ( AT4G33210.1 )
(BLAST)

001: MRIWCFSCFT DEDEDEEDDN GGRVKKQSLA TAMDNSNGDG DFVNFGENER APRVPRWRLR LCAEESEAAW AELDRFWTSE IPLNQLVQGE SSSNVVAEAE
101: DCTMEEADHD SYHKRAKVYS GLAECRSVSG VSSDAGNSVS SVERTVSFGI ASSSRTDTDM FCQNFILNYN RKDGKKDDGD DNGSSDTEDF EVHIDLTDDL
201: LHMVFSFLNH VDLCRSAMVC RQWRVASAHE DFWRVLNFEN IRISMEQFEN MCSRYPNATE VNVYGAPAVN ALAMKAATTL RNLEVLTIGK GHISESFFQA
301: LGECNMLRSV TVSDAILGNG AQEIHLSHDR LRELKITKCR VMRLSIRCPQ LRSLSLKRSN MSQAMLNCPL LQLLDIASCH KLLDAAIRSA AISCPQLESL
401: DVSNCSCVSD ETLREIAQAC ANLHILNASY CPNISLESVH LPMLTVLKLH SCEGITSASM TWIANSPALE VLELDNCNLL TTVSLHLSRL QSISLVHCRK
501: FTDLNLQSIM LSSITVSNCP ALRRITITSN ALRRLALQKQ ENLTTLVLQC HSLQEVDLSD CESLSNSVCK IFSDDGGCPM LKSLILDNCE SLTAVRFCNS
601: SLASLSLVGC RAVTSLELKC PRIEQICLDG CDHLETAFFQ PVALRSLNLG ICPKLSVLNI EAPYMVSLEL KGCGVLSEAS IMCPLLTSLD ASFCSQLRDD
701: CLSATTASCP LIESLVLMSC PSIGSDGLSS LNGLPNLTVL DLSYTFLMNL EPVFKSCIQL KVLKLQACKY LTDSSLEPLY KEGALPALEE LDLSYGTLCQ
801: TAIDDLLACC THLTHLSLNG CVNMHDLDWG STSVHLFDYF GVYSSSDNTQ EPAETANRLL QNLNCVGCPN IRKVLIPPAA RFYHLSTLNL SLSVNLKEVD
901: LTCSNLVLLN LSNCCSLEVL KLGCPRLASL FLQSCNMDEA GVEAAISGCS SLETLDLRFC PKISSVSMSK FRTVCPSLKR VFSSPNLLQD

Arabidopsis Description

FBL15SLOMO [Source:UniProtKB/TrEMBL;Acc:A0A178V148]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.