Factsheet for GSMUA_Achr11P09360_001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, vacuole
Any Predictor:	cytosol, mitochondrion, nucleus, vacuole
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr2P15100_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33210.1	GSMUA_Achr2P15100_001	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0396400-01	Rice	mitochondrion	59.53	65.44
GSMUA_Achr7P11390_001	Banana	cytosol	68.85	56.0
OQU91850	Sorghum	cytosol	65.23	47.33
KRH52245	Soybean	nucleus	57.58	46.36
TraesCS1D01G136800.4	Wheat	cytosol	63.14	44.69
Bra011427.1-P	Field mustard	cytosol	40.89	44.55
TraesCS1B01G154100.1	Wheat	cytosol	62.73	44.39
VIT_04s0008g01890.t01	Wine grape	nucleus	61.06	44.3
KRH61576	Soybean	nucleus	55.35	44.27
KRH15607	Soybean	cytosol	58.41	43.08
TraesCS1A01G136200.1	Wheat	cytosol	57.72	43.05
PGSC0003DMT400048411	Potato	cytosol	57.3	42.92
Bra034552.1-P	Field mustard	nucleus	50.76	42.84
KRH05410	Soybean	cytosol	58.14	42.57
CDY28286	Canola	nucleus	51.46	42.29
Solyc08g061820.2.1	Tomato	cytosol	57.02	41.79
CDY45032	Canola	nucleus	50.63	41.74
CDY45031	Canola	cytosol	50.76	41.01
Bra034551.1-P	Field mustard	cytosol	50.76	41.01
Zm00001d014232_P014	Maize	cytosol	59.67	40.78
CDY28285	Canola	cytosol	50.35	40.58
CDX75339	Canola	cytosol	54.52	40.54
Zm00001d033037_P008	Maize	cytosol	59.11	40.32
CDX68956	Canola	cytosol	54.66	40.23
AT4G33210.1	Thale cress	cytosol	55.08	40.0
CDY46126	Canola	cytosol	54.24	39.76
Bra037014.1-P	Field mustard	nucleus	54.1	39.45

Protein Annotations

EnsemblPlants:GSMUA_Achr11P09360_001	EnsemblPlants:GSMUA_Achr11T09360_001	EnsemblPlantsGene:GSMUA_Achr11G09360_001	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt_Cys-con_subtyp	ncoils:Coil	PANTHER:PTHR44842	SEG:seg	SMART:SM00367	SUPFAM:SSF52047
SUPFAM:SSF52058	UniParc:UPI000294DBFB	UniProt:M0RQR6	MapMan:35.1	:	:

Description

F-box/LRR-repeat protein 15 [Source:GMGC_GENE;Acc:GSMUA_Achr11G09360_001]

Coordinates

chr11:-:7213912..7220369

Molecular Weight (calculated)

80301.5 Da

IEP (calculated)

6.750

GRAVY (calculated)

0.238

Length

719 amino acids

Sequence
(BLAST)

001: MTSLRHLETL ILDKGRHSES FFLSEAFFLT LTDCPALTTL RISDAFISNC TQEVTVCHEK LHDLQLVKYR ALRITVRCPQ LQTLSLKRSS MAHVLLNCPQ
101: LCVLDLSSCH KLPDTAIRSS AMSCPLLTSL NMSSCLCVTD ETIREISFTC PNLCTLDASN CPNISFELVT LPMLMNLRLE SCEAITSASI SAISQSQMLK
201: SLELYNCGML TSVSLDLPHL QNISLVYLRR FVDLNLRSPV LKQIKVSRCS ALHRISITSN ALQKLVLQKQ ESLTTLLLQC QNLQEMDLSD CESLMDSICE
301: VFSDGGGCPK LRSLVLDNCE RLSMVKISSC TLVYLSLAWC HAMNAIELSC PNLEELNLDG CDHLESASFC SVGLELLNLG ICPRLSDLRI EAQNMLVLDL
401: KGCGVLSQAY IHCPRLKVLD ASFCRKFSDE SLSTIAASCP HIESLILSSC QSVGPNGLSS LRFLRRLTLL DLSYTFFMSL RPVFDNCLQL VVLKLSACKY
501: LTDFSLDALY KEDVLPALRE LDLSYSSIGQ LDILNLITYC TNLVHLNLNG CANINELIWS ASYCHLSNMA INNCSSAISK ENDESFRKTG HLLQILNCTG
601: CPNIKKVLIS SSANCLHLYK INLNLSKNLK EVYLTCTNLC MLNLSYCSSL VILRLNCPRL NNLQLLACRM LTEEALEDAI SQCQELEIIN IFSCSKIRAK
701: DFDRWRMVCP SLRRIQSSL

Best Arabidopsis Sequence Match ( AT4G33210.1 )
(BLAST)

001: MRIWCFSCFT DEDEDEEDDN GGRVKKQSLA TAMDNSNGDG DFVNFGENER APRVPRWRLR LCAEESEAAW AELDRFWTSE IPLNQLVQGE SSSNVVAEAE
101: DCTMEEADHD SYHKRAKVYS GLAECRSVSG VSSDAGNSVS SVERTVSFGI ASSSRTDTDM FCQNFILNYN RKDGKKDDGD DNGSSDTEDF EVHIDLTDDL
201: LHMVFSFLNH VDLCRSAMVC RQWRVASAHE DFWRVLNFEN IRISMEQFEN MCSRYPNATE VNVYGAPAVN ALAMKAATTL RNLEVLTIGK GHISESFFQA
301: LGECNMLRSV TVSDAILGNG AQEIHLSHDR LRELKITKCR VMRLSIRCPQ LRSLSLKRSN MSQAMLNCPL LQLLDIASCH KLLDAAIRSA AISCPQLESL
401: DVSNCSCVSD ETLREIAQAC ANLHILNASY CPNISLESVH LPMLTVLKLH SCEGITSASM TWIANSPALE VLELDNCNLL TTVSLHLSRL QSISLVHCRK
501: FTDLNLQSIM LSSITVSNCP ALRRITITSN ALRRLALQKQ ENLTTLVLQC HSLQEVDLSD CESLSNSVCK IFSDDGGCPM LKSLILDNCE SLTAVRFCNS
601: SLASLSLVGC RAVTSLELKC PRIEQICLDG CDHLETAFFQ PVALRSLNLG ICPKLSVLNI EAPYMVSLEL KGCGVLSEAS IMCPLLTSLD ASFCSQLRDD
701: CLSATTASCP LIESLVLMSC PSIGSDGLSS LNGLPNLTVL DLSYTFLMNL EPVFKSCIQL KVLKLQACKY LTDSSLEPLY KEGALPALEE LDLSYGTLCQ
801: TAIDDLLACC THLTHLSLNG CVNMHDLDWG STSVHLFDYF GVYSSSDNTQ EPAETANRLL QNLNCVGCPN IRKVLIPPAA RFYHLSTLNL SLSVNLKEVD
901: LTCSNLVLLN LSNCCSLEVL KLGCPRLASL FLQSCNMDEA GVEAAISGCS SLETLDLRFC PKISSVSMSK FRTVCPSLKR VFSSPNLLQD

Arabidopsis Description

FBL15SLOMO [Source:UniProtKB/TrEMBL;Acc:A0A178V148]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.