Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY54948 | Canola | cytosol | 95.95 | 60.94 |
| Bra038162.1-P | Field mustard | cytosol | 92.57 | 55.92 |
| AT1G56450.1 | Thale cress | cytosol | 89.19 | 53.66 |
| VIT_06s0004g03190.t01 | Wine grape | nucleus | 85.14 | 51.43 |
| Bra027934.1-P | Field mustard | cytosol | 91.89 | 51.32 |
| KRG96935 | Soybean | cytosol, nucleus | 79.05 | 50.43 |
| PGSC0003DMT400020843 | Potato | cytosol | 83.11 | 50.2 |
| Solyc11g069150.1.1 | Tomato | extracellular | 83.11 | 50.2 |
| KRH68696 | Soybean | cytosol, endoplasmic reticulum, nucleus | 78.38 | 50.0 |
| GSMUA_Achr11P... | Banana | cytosol | 79.05 | 46.43 |
| TraesCS4A01G220400.2 | Wheat | cytosol, plastid | 70.27 | 44.83 |
| TraesCS4D01G095100.1 | Wheat | cytosol | 70.27 | 42.8 |
| TraesCS5A01G301400.1 | Wheat | unclear | 70.27 | 42.62 |
| TraesCS5B01G299900.1 | Wheat | cytosol | 70.27 | 42.62 |
| TraesCS5D01G307400.1 | Wheat | cytosol | 70.27 | 41.94 |
| Os09t0515200-01 | Rice | cytosol | 71.62 | 41.41 |
| EER99181 | Sorghum | plastid | 72.3 | 40.68 |
| Zm00001d006125_P002 | Maize | cytosol, peroxisome, plastid | 71.62 | 40.3 |
| HORVU5Hr1G078810.1 | Barley | plastid | 70.27 | 34.67 |
| TraesCS4B01G099100.1 | Wheat | golgi | 70.27 | 32.91 |
| Zm00001d021147_P002 | Maize | cytosol, plastid | 71.62 | 24.48 |
Protein Annotations
| MapMan:19.2.6.1.2.7 | Gene3D:3.60.20.10 | EnsemblPlantsGene:Bra038919 | EnsemblPlants:Bra038919.1 | EnsemblPlants:Bra038919.1-P | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004298 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005839 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0051603 | InterPro:IPR029055 | UniProt:M4FCV0 | InterPro:Ntn_hydrolases_N | PFAM:PF00227 | PANTHER:PTHR11599 |
| PANTHER:PTHR11599:SF5 | InterPro:Proteasome_endopept_cplx_B | InterPro:Proteasome_sua/b | SUPFAM:SSF56235 | UniParc:UPI000253E7BB | : |
Description
AT1G56450 (E=2e-077) PBG1 | PBG1; peptidase/ threonine-type endopeptidase
Coordinates
chrScaffold000155:-:136408..137033
Molecular Weight (calculated)
16700.9 Da
IEP (calculated)
6.669
GRAVY (calculated)
-0.363
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MWDDGNSLGP KEVHNYLTRV MYNRRNKFNP LCNTLVLGGV NNGESYPGMV SMIGVSFEDN HVATGFGNHL AKPILRDEWH ADVSFEDGVK VLEKCMCVLL
101: YRDRSAINKL QIAKITEEGI TVSQPYSLKT FWEYKAFHNP TAGAEGSW
101: YRDRSAINKL QIAKITEEGI TVSQPYSLKT FWEYKAFHNP TAGAEGSW
001: MTTFSVPIDN GDSMKIAEEE SQRTLYPYVT GTSIVAIKYK DGVLMASDMG GSYGSTLRYK NIERVKAIGK HSLLGASGEI SDFQEILRYL DELTLNDNMW
101: DDGNSLGPKE IHNYLTRVMY NRRNKFNPLW NTLVLGGVKN GKSYLGMVSM IGVSFEDDHV ATGFGNHLAR PILRDEWHAD LSFEDGVKLL EKCMRVLLYR
201: DRSAINKLQI AKITEEGVTV SQPYSLKTYW EFSSFHNPTA GAAGSW
101: DDGNSLGPKE IHNYLTRVMY NRRNKFNPLW NTLVLGGVKN GKSYLGMVSM IGVSFEDDHV ATGFGNHLAR PILRDEWHAD LSFEDGVKLL EKCMRVLLYR
201: DRSAINKLQI AKITEEGVTV SQPYSLKTYW EFSSFHNPTA GAAGSW
Arabidopsis Description
PBG1Proteasome subunit beta type-4 [Source:UniProtKB/Swiss-Prot;Acc:Q7DLR9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.