Factsheet for Os09t0515200-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 3
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G220400.2	Wheat	cytosol, plastid	81.25	89.66
TraesCS5A01G301400.1	Wheat	unclear	83.98	88.11
TraesCS5B01G299900.1	Wheat	cytosol	83.98	88.11
TraesCS4D01G095100.1	Wheat	cytosol	83.2	87.65
TraesCS5D01G307400.1	Wheat	cytosol	84.38	87.1
Zm00001d006125_P002	Maize	cytosol, peroxisome, plastid	87.5	85.17
EER99181	Sorghum	plastid	87.5	85.17
GSMUA_Achr11P...	Banana	cytosol	73.83	75.0
KRG96935	Soybean	cytosol, nucleus	67.58	74.57
KRH68696	Soybean	cytosol, endoplasmic reticulum, nucleus	67.58	74.57
Bra038919.1-P	Field mustard	cytosol	41.41	71.62
CDY41710	Canola	cytosol	68.36	71.43
Bra038162.1-P	Field mustard	cytosol	68.36	71.43
VIT_06s0004g03190.t01	Wine grape	nucleus	68.36	71.43
CDY42368	Canola	cytosol	67.97	71.02
CDY04377	Canola	cytosol, extracellular	67.58	70.61
HORVU5Hr1G078810.1	Barley	plastid	82.42	70.33
AT1G56450.1	Thale cress	cytosol	67.19	69.92
CDY68783	Canola	cytosol	66.8	69.8
PGSC0003DMT400020843	Potato	cytosol	66.02	68.98
Solyc11g069150.1.1	Tomato	extracellular	65.23	68.16
TraesCS4B01G099100.1	Wheat	golgi	83.59	67.72
CDY39004	Canola	extracellular	67.97	66.67
Bra027934.1-P	Field mustard	cytosol	68.36	66.04
CDY54948	Canola	cytosol	57.81	63.52
Zm00001d021147_P002	Maize	cytosol, plastid	82.81	48.96

Protein Annotations

MapMan:19.2.6.1.2.7	Gene3D:3.60.20.10	EntrezGene:4347573	EMBL:AB026568	EMBL:AK071380	EMBL:AK103975
EMBL:AK104212	ProteinID:BAD34432.1	ProteinID:BAF25579.1	ProteinID:BAT08953.1	GO:GO:0000502	GO:GO:0003674
GO:GO:0003824	GO:GO:0004175	GO:GO:0004298	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0005839	GO:GO:0005840	GO:GO:0006508
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009628
GO:GO:0009651	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0022626	GO:GO:0046686
GO:GO:0051603	InterPro:IPR023333	InterPro:IPR029055	InterPro:Ntn_hydrolases_N	EnsemblPlantsGene:Os09g0515200	EnsemblPlants:Os09t0515200-01
PFAM:PF00227	PIRSF:PIRSF001213	ScanProsite:PS00854	PFscan:PS51476	PANTHER:PTHR11599	PANTHER:PTHR11599:SF5
InterPro:Proteasome_bsu_CS	InterPro:Proteasome_endopept_cplx_B	InterPro:Proteasome_suB-type	InterPro:Proteasome_sua/b	UniProt:Q9LST4	SUPFAM:SSF56235
MEROPS:T01.A13	UniParc:UPI00000A61D0	RefSeq:XP_015651258.1	SEG:seg	:	:

Description

20S proteasome beta7 subunitBeta 7 subunit of 20S proteasome. (Os09t0515200-01);Beta 7 subunit of 20S proteasome. (Os09t0515200-02)

Coordinates

chr9:-:20066961..20069477

Molecular Weight (calculated)

28477.9 Da

IEP (calculated)

7.770

GRAVY (calculated)

-0.336

Length

256 amino acids

Sequence
(BLAST)

001: MAWQQPMDGS HASGSKAAAA VADGPGTQRT QYPYVTGSSI IALKYKDGVI MASDTGASYG STLRYKSVER IKAVGKHSLI GASGEFSDFQ EILRYLDELT
101: LSDHMWDDGN SLGPKEVHSY LTRVMYNRRN KFDPLWNSLV IGGVKKGPKG EEKYLGMVNM IGTHFEENHI ATGFGNHMAI PILRTEWRED MTFEEAVKLV
201: EKCLLVLLYR DRSSINKFQI AKITTEGATI YPPYSLKTYW GFAAFENPAQ GAVGSW

Best Arabidopsis Sequence Match ( AT1G56450.1 )
(BLAST)

001: MTTFSVPIDN GDSMKIAEEE SQRTLYPYVT GTSIVAIKYK DGVLMASDMG GSYGSTLRYK NIERVKAIGK HSLLGASGEI SDFQEILRYL DELTLNDNMW
101: DDGNSLGPKE IHNYLTRVMY NRRNKFNPLW NTLVLGGVKN GKSYLGMVSM IGVSFEDDHV ATGFGNHLAR PILRDEWHAD LSFEDGVKLL EKCMRVLLYR
201: DRSAINKLQI AKITEEGVTV SQPYSLKTYW EFSSFHNPTA GAAGSW

Arabidopsis Description

PBG1Proteasome subunit beta type-4 [Source:UniProtKB/Swiss-Prot;Acc:Q7DLR9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.