Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g069150.1.1 | Tomato | extracellular | 99.18 | 99.18 |
| VIT_06s0004g03190.t01 | Wine grape | nucleus | 88.16 | 88.16 |
| KRG96935 | Soybean | cytosol, nucleus | 80.0 | 84.48 |
| KRH68696 | Soybean | cytosol, endoplasmic reticulum, nucleus | 79.18 | 83.62 |
| Bra038919.1-P | Field mustard | cytosol | 50.2 | 83.11 |
| CDY42368 | Canola | cytosol | 80.41 | 80.41 |
| Bra038162.1-P | Field mustard | cytosol | 80.0 | 80.0 |
| CDY04377 | Canola | cytosol, extracellular | 80.0 | 80.0 |
| CDY41710 | Canola | cytosol | 79.59 | 79.59 |
| CDY68783 | Canola | cytosol | 79.59 | 79.59 |
| AT1G56450.1 | Thale cress | cytosol | 77.96 | 77.64 |
| GSMUA_Achr11P... | Banana | cytosol | 79.59 | 77.38 |
| CDY39004 | Canola | extracellular | 80.0 | 75.1 |
| Bra027934.1-P | Field mustard | cytosol | 79.59 | 73.58 |
| CDY54948 | Canola | cytosol | 68.16 | 71.67 |
| TraesCS4A01G220400.2 | Wheat | cytosol, plastid | 66.12 | 69.83 |
| TraesCS5A01G301400.1 | Wheat | unclear | 67.76 | 68.03 |
| TraesCS5B01G299900.1 | Wheat | cytosol | 67.76 | 68.03 |
| TraesCS4D01G095100.1 | Wheat | cytosol | 67.35 | 67.9 |
| TraesCS5D01G307400.1 | Wheat | cytosol | 67.76 | 66.94 |
| Os09t0515200-01 | Rice | cytosol | 68.98 | 66.02 |
| EER99181 | Sorghum | plastid | 70.2 | 65.4 |
| Zm00001d006125_P002 | Maize | cytosol, peroxisome, plastid | 70.2 | 65.4 |
| HORVU5Hr1G078810.1 | Barley | plastid | 68.16 | 55.67 |
| TraesCS4B01G099100.1 | Wheat | golgi | 66.94 | 51.9 |
| Zm00001d021147_P002 | Maize | cytosol, plastid | 67.35 | 38.11 |
Protein Annotations
| EntrezGene:102600302 | MapMan:19.2.6.1.2.7 | Gene3D:3.60.20.10 | GO:GO:0000502 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004175 | GO:GO:0004298 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005839 | GO:GO:0005840 | GO:GO:0006508 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009056 | GO:GO:0009628 | GO:GO:0009651 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0022626 | GO:GO:0046686 | GO:GO:0051603 |
| InterPro:IPR023333 | InterPro:IPR029055 | UniProt:M1AE64 | InterPro:Ntn_hydrolases_N | PFAM:PF00227 | EnsemblPlantsGene:PGSC0003DMG400008067 |
| PGSC:PGSC0003DMG400008067 | EnsemblPlants:PGSC0003DMT400020843 | PIRSF:PIRSF001213 | ScanProsite:PS00854 | PFscan:PS51476 | PANTHER:PTHR11599 |
| PANTHER:PTHR11599:SF5 | InterPro:Proteasome_bsu_CS | InterPro:Proteasome_endopept_cplx_B | InterPro:Proteasome_suB-type | InterPro:Proteasome_sua/b | SUPFAM:SSF56235 |
| MEROPS:T01.A13 | UniParc:UPI0002951F75 | RefSeq:XP_006340139.1 | : | : | : |
Description
Proteasome subunit beta type [Source:PGSC_GENE;Acc:PGSC0003DMG400008067]
Coordinates
chr11:-:41056618..41061071
Molecular Weight (calculated)
27630.0 Da
IEP (calculated)
7.731
GRAVY (calculated)
-0.392
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MNVMDSAPAK SSLMSPESDI QRTQYPYVTG TSVVGIKYKD GILLAADMGG SYGSTIRYKS VERLKPVGKH SLLGASGEIS DFQEIMKYLD ELILYDNMWD
101: DGNSLGPKEV HNYLTRVMYN RRNKFNPLWN SLVLGGVKNG QKYLGTVSMI GVHYEDNHVA TGFGNHLARP ILRDEWHENL SYEEGVKLLE KCMRVLLYRD
201: RSAVNKLQIA KITEEGVTIS QPYSLKTFWN FSAFQNPTVG AEGSW
101: DGNSLGPKEV HNYLTRVMYN RRNKFNPLWN SLVLGGVKNG QKYLGTVSMI GVHYEDNHVA TGFGNHLARP ILRDEWHENL SYEEGVKLLE KCMRVLLYRD
201: RSAVNKLQIA KITEEGVTIS QPYSLKTFWN FSAFQNPTVG AEGSW
001: MTTFSVPIDN GDSMKIAEEE SQRTLYPYVT GTSIVAIKYK DGVLMASDMG GSYGSTLRYK NIERVKAIGK HSLLGASGEI SDFQEILRYL DELTLNDNMW
101: DDGNSLGPKE IHNYLTRVMY NRRNKFNPLW NTLVLGGVKN GKSYLGMVSM IGVSFEDDHV ATGFGNHLAR PILRDEWHAD LSFEDGVKLL EKCMRVLLYR
201: DRSAINKLQI AKITEEGVTV SQPYSLKTYW EFSSFHNPTA GAAGSW
101: DDGNSLGPKE IHNYLTRVMY NRRNKFNPLW NTLVLGGVKN GKSYLGMVSM IGVSFEDDHV ATGFGNHLAR PILRDEWHAD LSFEDGVKLL EKCMRVLLYR
201: DRSAINKLQI AKITEEGVTV SQPYSLKTYW EFSSFHNPTA GAAGSW
Arabidopsis Description
PBG1Proteasome subunit beta type-4 [Source:UniProtKB/Swiss-Prot;Acc:Q7DLR9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.