Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74067 | Canola | nucleus | 64.06 | 55.16 |
| CDY71888 | Canola | extracellular, golgi | 85.42 | 53.42 |
| CDY08019 | Canola | mitochondrion, nucleus | 66.15 | 43.79 |
| CDY48230 | Canola | cytosol, extracellular, plastid | 25.0 | 43.24 |
| CDX74406 | Canola | endoplasmic reticulum | 50.52 | 41.45 |
| CDY26345 | Canola | cytosol, nucleus, plastid | 63.54 | 40.67 |
| CDY48061 | Canola | plastid | 69.27 | 39.0 |
| CDX68998 | Canola | nucleus | 46.35 | 35.89 |
| CDX75374 | Canola | nucleus | 46.35 | 35.04 |
| CDY22755 | Canola | extracellular | 21.35 | 33.61 |
| TraesCS7A01G405900.1 | Wheat | nucleus | 42.19 | 32.27 |
| TraesCS7B01G305800.3 | Wheat | nucleus | 41.67 | 32.13 |
| TraesCS7A01G111400.1 | Wheat | nucleus | 41.15 | 30.98 |
| HORVU7Hr1G023800.2 | Barley | cytosol | 25.0 | 30.97 |
| PGSC0003DMT400013080 | Potato | nucleus | 41.15 | 30.62 |
| Zm00001d019181_P001 | Maize | nucleus | 40.62 | 30.35 |
| EER97413 | Sorghum | nucleus | 40.1 | 30.2 |
| TraesCS7B01G009300.1 | Wheat | nucleus | 40.62 | 30.12 |
| TraesCS7D01G106500.1 | Wheat | nucleus | 39.58 | 29.8 |
| CDY16047 | Canola | golgi, plasma membrane | 45.83 | 29.24 |
| Zm00001d021873_P001 | Maize | nucleus | 39.06 | 29.07 |
| EER96069 | Sorghum | nucleus | 38.54 | 29.02 |
| Os07t0213400-01 | Rice | nucleus, plastid | 40.1 | 28.95 |
| HORVU7Hr1G094990.2 | Barley | nucleus | 41.15 | 28.32 |
| KRH10674 | Soybean | nucleus | 42.19 | 27.0 |
| Os08t0192200-01 | Rice | nucleus | 13.02 | 26.32 |
| KRH21674 | Soybean | nucleus | 39.06 | 25.42 |
| Solyc01g106560.2.1 | Tomato | nucleus | 40.62 | 25.41 |
| TraesCS5A01G215300.3 | Wheat | nucleus | 40.62 | 23.49 |
| TraesCS5D01G216700.1 | Wheat | nucleus | 40.62 | 23.35 |
| CDY48229 | Canola | cytosol, mitochondrion | 16.15 | 20.39 |
| VIT_03s0088g01000.t01 | Wine grape | nucleus | 43.23 | 19.76 |
| HORVU7Hr1G023920.2 | Barley | cytosol, nucleus | 19.27 | 18.5 |
| HORVU7Hr1G023780.5 | Barley | cytosol | 10.94 | 17.5 |
| GSMUA_Achr6P16520_001 | Banana | nucleus | 19.79 | 15.26 |
| HORVU7Hr1G023790.1 | Barley | cytosol, mitochondrion, nucleus | 1.56 | 3.66 |
Protein Annotations
| EnsemblPlants:CDY43847 | EnsemblPlantsGene:GSBRNA2T00077373001 | ncoils:Coil | PANTHER:PTHR34684 | ProteinID:CDY43847 | ProteinID:CDY43847.1 |
| SEG:seg | UniParc:UPI0004EDB2D2 | UniProt:A0A078I169 | MapMan:35.2 | : | : |
Description
BnaA05g18590DBnaA05g18590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I169]
Coordinates
chrLK032570:+:15441..16416
Molecular Weight (calculated)
22324.4 Da
IEP (calculated)
9.915
GRAVY (calculated)
-0.906
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLETENRIA SVLLREAAEL RRQAEKDGVR AYIEKPNVRH RPNSRFLTAT VLEFQQSVET NEMWKAQEQE NERLKRKSRD ESSSSSSQMK RSSSFSKRSL
101: DKKCSSINEE RKITHQSLLD KILYLDDDDE ASFTFSFLHL LSLFVNDRKK RGRGSVGPRM DETVPYLPTE KVDQLQSSDT RKRKVVLLQL GL
101: DKKCSSINEE RKITHQSLLD KILYLDDDDE ASFTFSFLHL LSLFVNDRKK RGRGSVGPRM DETVPYLPTE KVDQLQSSDT RKRKVVLLQL GL
001: MDLETENRIA SILLREAAEL RRQAEKDGVR AYLEKPNVRH RPNSRFLTAT VLGVQQANKA VETNEMWSLR SKEIEFGERL KRKSRDESSN GQSEQNNRRD
101: FLKRCTSVDE NVTTTSLSPS SSRSRSKRWQ SEDDDDEGLG DVEVKTFLQS RVKRGRGSVG AMMDEPLPCL PERELSRTSD TGDRKLVIQP ERSPLLRRRT
201: DSSSSDEEEV YKRAHRKRKE HKKKLSKKHK SKEKKRDRKK RKYGRD
101: FLKRCTSVDE NVTTTSLSPS SSRSRSKRWQ SEDDDDEGLG DVEVKTFLQS RVKRGRGSVG AMMDEPLPCL PERELSRTSD TGDRKLVIQP ERSPLLRRRT
201: DSSSSDEEEV YKRAHRKRKE HKKKLSKKHK SKEKKRDRKK RKYGRD
Arabidopsis Description
At4g33690 [Source:UniProtKB/TrEMBL;Acc:Q6NPE9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.