Subcellular Localization
min:
: max
Winner_takes_all: extracellular, golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- golgi 4
- plasma membrane 3
- endoplasmic reticulum 3
- vacuole 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43847 | Canola | nucleus | 53.42 | 85.42 |
| CDX74406 | Canola | endoplasmic reticulum | 53.75 | 70.51 |
| CDY48230 | Canola | cytosol, extracellular, plastid | 22.48 | 62.16 |
| CDY48229 | Canola | cytosol, mitochondrion | 30.62 | 61.84 |
| CDX74067 | Canola | nucleus | 40.39 | 55.61 |
| CDY48061 | Canola | plastid | 55.05 | 49.56 |
| CDY26345 | Canola | cytosol, nucleus, plastid | 44.63 | 45.67 |
| CDY16047 | Canola | golgi, plasma membrane | 44.63 | 45.51 |
| CDY08019 | Canola | mitochondrion, nucleus | 42.02 | 44.48 |
| CDY22755 | Canola | extracellular | 17.59 | 44.26 |
| CDX68998 | Canola | nucleus | 28.99 | 35.89 |
| CDX75374 | Canola | nucleus | 29.32 | 35.43 |
| Zm00001d019181_P001 | Maize | nucleus | 29.32 | 35.02 |
| EER97413 | Sorghum | nucleus | 27.69 | 33.33 |
| TraesCS7A01G111400.1 | Wheat | nucleus | 27.69 | 33.33 |
| Os07t0213400-01 | Rice | nucleus, plastid | 28.66 | 33.08 |
| TraesCS7B01G009300.1 | Wheat | nucleus | 27.69 | 32.82 |
| PGSC0003DMT400013080 | Potato | nucleus | 27.36 | 32.56 |
| TraesCS7B01G305800.3 | Wheat | nucleus | 26.38 | 32.53 |
| EER96069 | Sorghum | nucleus | 26.71 | 32.16 |
| TraesCS7D01G106500.1 | Wheat | nucleus | 26.71 | 32.16 |
| TraesCS7A01G405900.1 | Wheat | nucleus | 26.06 | 31.87 |
| Zm00001d021873_P001 | Maize | nucleus | 26.71 | 31.78 |
| HORVU7Hr1G023800.2 | Barley | cytosol | 15.96 | 31.61 |
| HORVU7Hr1G094990.2 | Barley | nucleus | 26.71 | 29.39 |
| KRH10674 | Soybean | nucleus | 28.34 | 29.0 |
| Solyc01g106560.2.1 | Tomato | nucleus | 27.36 | 27.36 |
| KRH21674 | Soybean | nucleus | 25.73 | 26.78 |
| Os08t0192200-01 | Rice | nucleus | 8.14 | 26.32 |
| TraesCS5A01G215300.3 | Wheat | nucleus | 27.69 | 25.6 |
| TraesCS5D01G216700.1 | Wheat | nucleus | 27.69 | 25.45 |
| VIT_03s0088g01000.t01 | Wine grape | nucleus | 28.01 | 20.48 |
| HORVU7Hr1G023920.2 | Barley | cytosol, nucleus | 13.03 | 20.0 |
| HORVU7Hr1G023780.5 | Barley | cytosol | 6.51 | 16.67 |
| GSMUA_Achr6P16520_001 | Banana | nucleus | 13.03 | 16.06 |
| HORVU7Hr1G023790.1 | Barley | cytosol, mitochondrion, nucleus | 2.28 | 8.54 |
Protein Annotations
| EnsemblPlants:CDY71888 | EnsemblPlantsGene:GSBRNA2T00021012001 | GO:A0A078JW75 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR34684 | ProteinID:CDY71888 | ProteinID:CDY71888.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EF1C0B |
| UniProt:A0A078JW75 | MapMan:35.1 | : | : | : | : |
Description
BnaAnng39170DBnaAnng39170D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JW75]
Coordinates
chrLK047960:+:2..2256
Molecular Weight (calculated)
35185.1 Da
IEP (calculated)
7.313
GRAVY (calculated)
-0.348
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: CVQAYMRATT LPAQICFDVQ CLLLLMDLET ENQIASVLLR KAAELRRQAE KDGVRAYLEK PNVRHRPNSR FLTATVLGVQ QSVETNEMWK AQEQENERLK
101: RKSREESSSS SSQMKRSSSF SKRSLDKKCS SINEERKITH QSPLDKRLYL DDDDEFFSPI TVYICLFAIA SVTFSFLHLL SLFVNDRNKR GRGSVGPRMD
201: ETVPYLPTEK VDQLQKVRGD IEFAVYECLQ EEWGVLEKSL EAALDVDQTI FVVVAEDVER SKTTVLWAAR NFSGKKICSL YVHRPARPAS CSENLLLLFL
301: SDLTVLW
101: RKSREESSSS SSQMKRSSSF SKRSLDKKCS SINEERKITH QSPLDKRLYL DDDDEFFSPI TVYICLFAIA SVTFSFLHLL SLFVNDRNKR GRGSVGPRMD
201: ETVPYLPTEK VDQLQKVRGD IEFAVYECLQ EEWGVLEKSL EAALDVDQTI FVVVAEDVER SKTTVLWAAR NFSGKKICSL YVHRPARPAS CSENLLLLFL
301: SDLTVLW
001: MDLETENRIA SILLREAAEL RRQAEKDGVR AYLEKPNVRH RPNSRFLTAT VLGVQQANKA VETNEMWSLR SKEIEFGERL KRKSRDESSN GQSEQNNRRD
101: FLKRCTSVDE NVTTTSLSPS SSRSRSKRWQ SEDDDDEGLG DVEVKTFLQS RVKRGRGSVG AMMDEPLPCL PERELSRTSD TGDRKLVIQP ERSPLLRRRT
201: DSSSSDEEEV YKRAHRKRKE HKKKLSKKHK SKEKKRDRKK RKYGRD
101: FLKRCTSVDE NVTTTSLSPS SSRSRSKRWQ SEDDDDEGLG DVEVKTFLQS RVKRGRGSVG AMMDEPLPCL PERELSRTSD TGDRKLVIQP ERSPLLRRRT
201: DSSSSDEEEV YKRAHRKRKE HKKKLSKKHK SKEKKRDRKK RKYGRD
Arabidopsis Description
At4g33690 [Source:UniProtKB/TrEMBL;Acc:Q6NPE9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.