Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74406 | Canola | endoplasmic reticulum | 84.87 | 55.13 |
| CDY22755 | Canola | extracellular | 36.84 | 45.9 |
| CDY71888 | Canola | extracellular, golgi | 61.84 | 30.62 |
| CDY16047 | Canola | golgi, plasma membrane | 45.39 | 22.92 |
| CDX74067 | Canola | nucleus | 24.34 | 16.59 |
| CDY43847 | Canola | nucleus | 20.39 | 16.15 |
| CDY26345 | Canola | cytosol, nucleus, plastid | 30.26 | 15.33 |
| CDY48061 | Canola | plastid | 34.21 | 15.25 |
| Zm00001d019181_P001 | Maize | nucleus | 23.68 | 14.01 |
| HORVU7Hr1G023920.2 | Barley | cytosol, nucleus | 17.76 | 13.5 |
| CDY08019 | Canola | mitochondrion, nucleus | 25.66 | 13.45 |
| EER97413 | Sorghum | nucleus | 21.71 | 12.94 |
| TraesCS7A01G111400.1 | Wheat | nucleus | 21.05 | 12.55 |
| EER96069 | Sorghum | nucleus | 20.39 | 12.16 |
| Zm00001d021873_P001 | Maize | nucleus | 20.39 | 12.02 |
| PGSC0003DMT400013080 | Potato | nucleus | 20.39 | 12.02 |
| TraesCS7B01G009300.1 | Wheat | nucleus | 20.39 | 11.97 |
| TraesCS7D01G106500.1 | Wheat | nucleus | 19.74 | 11.76 |
| GSMUA_Achr6P16520_001 | Banana | nucleus | 19.08 | 11.65 |
| Os07t0213400-01 | Rice | nucleus, plastid | 19.74 | 11.28 |
| KRH10674 | Soybean | nucleus | 21.71 | 11.0 |
| KRH21674 | Soybean | nucleus | 20.39 | 10.51 |
| TraesCS7B01G305800.3 | Wheat | nucleus | 17.11 | 10.44 |
| Solyc01g106560.2.1 | Tomato | nucleus | 20.39 | 10.1 |
| TraesCS7A01G405900.1 | Wheat | nucleus | 16.45 | 9.96 |
| HORVU7Hr1G023790.1 | Barley | cytosol, mitochondrion, nucleus | 5.26 | 9.76 |
| CDX75374 | Canola | nucleus | 15.79 | 9.45 |
| TraesCS5A01G215300.3 | Wheat | nucleus | 20.39 | 9.34 |
| TraesCS5D01G216700.1 | Wheat | nucleus | 20.39 | 9.28 |
| CDX68998 | Canola | nucleus | 15.13 | 9.27 |
| HORVU7Hr1G094990.2 | Barley | nucleus | 15.79 | 8.6 |
| Os08t0192200-01 | Rice | nucleus | 4.61 | 7.37 |
| VIT_03s0088g01000.t01 | Wine grape | nucleus | 18.42 | 6.67 |
| HORVU7Hr1G023800.2 | Barley | cytosol | 4.61 | 4.52 |
| HORVU7Hr1G023780.5 | Barley | cytosol | 2.63 | 3.33 |
| CDY48230 | Canola | cytosol, extracellular, plastid | 1.97 | 2.7 |
Protein Annotations
| EnsemblPlants:CDY48229 | EnsemblPlantsGene:GSBRNA2T00089085001 | ProteinID:CDY48229 | ProteinID:CDY48229.1 | SEG:seg | UniParc:UPI0004EE8486 |
| UniProt:A0A078IFU6 | MapMan:35.1 | : | : | : | : |
Description
BnaAnng09590DBnaAnng09590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IFU6]
Coordinates
chrLK032761:-:66503..69152
Molecular Weight (calculated)
17618.9 Da
IEP (calculated)
5.095
GRAVY (calculated)
-0.441
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MMRIESFLQS RYIYKRERGS VGPRMDETGP YLPTEKVDQF QSSDTRERKV RDEAAEVRGD IEFAVYRCNK SECLQEEWGV LEKSPEAALD VDQTIFVAVA
101: EDVERSKTTV LWAARNFSSK KFCLLYVHRP ARPASCNENL LLLFLSDLTV LW
101: EDVERSKTTV LWAARNFSSK KFCLLYVHRP ARPASCNENL LLLFLSDLTV LW
001: MGEIGGEELV LDVDETIFVA VAEDVERSKT TVLWAARNFS GKKICLLYVH RTARAASWTH KKLVGGSFKK HDVKVIERVE KPKVDELMNS YLQLLSETEI
101: QTDKLCIAGQ NIEECIVELI ARHKIKWLVM GAASDKHYSW KMTDLKSKKA IFVCKKAPDS CHIWFLCKGY LIFTRASNDD SNNRQTMPPL VQLDSDNETR
201: KSEKLESSYM RRRLRYWRSL LEQVNLLQNC ADGEKDTGQL EREKVEPRAP PLFSSGSSSS FGEPVGPEPV SPELVDSDTL NTSNVEEKER EGDVARKVHR
301: YDKAMHDIGQ SDRTVYGEAG KKWEEDASTT EALCKAKALE GLCIKESSQR KRLEELLEKE KLEVKMVIEQ NNGFMKELQM VQGRNLKLES QMRKLQDLEK
401: EHGEKFDTAM ELLKSFRQKR DEIRIDHENA VKEVNALRRL VKGETGESSG SEMLDYSFME INEATNEFDP SWKLGEGKYG SVYKGNLQHL QVAVEILSRV
501: RHPNLVTLMG ACPESRSLIY QYIPNGSLED CFSSENNVPA LSWESRIRIA SEICSALLFL HSNIPCIIHG NLKPSKILLD SNLVTKINDY GISQLIPIDG
601: LDKSDPHVDP HYFVSREMTL ESDIYAFGII LLQLLTRRPV SGILRDVKCA LENDNISAVL DNSAGDWPVA RGKKLANVAI RCCKKNPMNR PDLAVVLRFI
701: DRMKAPEVPS SETSSYANQN VPRRPPSHYL CPIFQEVMKD PLIAADGFTY EAEAIREWLA NGHDTSPMTN LKMEDCNLIP NHALHLAIQD WQNQW
101: QTDKLCIAGQ NIEECIVELI ARHKIKWLVM GAASDKHYSW KMTDLKSKKA IFVCKKAPDS CHIWFLCKGY LIFTRASNDD SNNRQTMPPL VQLDSDNETR
201: KSEKLESSYM RRRLRYWRSL LEQVNLLQNC ADGEKDTGQL EREKVEPRAP PLFSSGSSSS FGEPVGPEPV SPELVDSDTL NTSNVEEKER EGDVARKVHR
301: YDKAMHDIGQ SDRTVYGEAG KKWEEDASTT EALCKAKALE GLCIKESSQR KRLEELLEKE KLEVKMVIEQ NNGFMKELQM VQGRNLKLES QMRKLQDLEK
401: EHGEKFDTAM ELLKSFRQKR DEIRIDHENA VKEVNALRRL VKGETGESSG SEMLDYSFME INEATNEFDP SWKLGEGKYG SVYKGNLQHL QVAVEILSRV
501: RHPNLVTLMG ACPESRSLIY QYIPNGSLED CFSSENNVPA LSWESRIRIA SEICSALLFL HSNIPCIIHG NLKPSKILLD SNLVTKINDY GISQLIPIDG
601: LDKSDPHVDP HYFVSREMTL ESDIYAFGII LLQLLTRRPV SGILRDVKCA LENDNISAVL DNSAGDWPVA RGKKLANVAI RCCKKNPMNR PDLAVVLRFI
701: DRMKAPEVPS SETSSYANQN VPRRPPSHYL CPIFQEVMKD PLIAADGFTY EAEAIREWLA NGHDTSPMTN LKMEDCNLIP NHALHLAIQD WQNQW
Arabidopsis Description
PUB32U-box domain-containing protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q94A51]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.