CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol, plastid

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 1
extracellular 2
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plastid
Any Predictor:	cytosol, extracellular, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48061	Canola	plastid	79.28	25.81
CDY43847	Canola	nucleus	43.24	25.0
HORVU7Hr1G023800.2	Barley	cytosol	32.43	23.23
CDY71888	Canola	extracellular, golgi	62.16	22.48
CDY16047	Canola	golgi, plasma membrane	58.56	21.59
CDX74067	Canola	nucleus	43.24	21.52
CDX68998	Canola	nucleus	43.24	19.35
CDY08019	Canola	mitochondrion, nucleus	50.45	19.31
CDX75374	Canola	nucleus	43.24	18.9
CDY26345	Canola	cytosol, nucleus, plastid	45.95	17.0
TraesCS7A01G405900.1	Wheat	nucleus	35.14	15.54
TraesCS7B01G305800.3	Wheat	nucleus	33.33	14.86
PGSC0003DMT400013080	Potato	nucleus	34.23	14.73
HORVU7Hr1G094990.2	Barley	nucleus	36.94	14.7
Zm00001d019181_P001	Maize	nucleus	33.33	14.4
Os07t0213400-01	Rice	nucleus, plastid	34.23	14.29
TraesCS7A01G111400.1	Wheat	nucleus	32.43	14.12
EER97413	Sorghum	nucleus	32.43	14.12
EER96069	Sorghum	nucleus	32.43	14.12
TraesCS7D01G106500.1	Wheat	nucleus	32.43	14.12
Zm00001d021873_P001	Maize	nucleus	32.43	13.95
TraesCS7B01G009300.1	Wheat	nucleus	32.43	13.9
KRH10674	Soybean	nucleus	35.14	13.0
KRH21674	Soybean	nucleus	34.23	12.88
Solyc01g106560.2.1	Tomato	nucleus	35.14	12.7
TraesCS5A01G215300.3	Wheat	nucleus	32.43	10.84
TraesCS5D01G216700.1	Wheat	nucleus	32.43	10.78
VIT_03s0088g01000.t01	Wine grape	nucleus	36.94	9.76
HORVU7Hr1G023780.5	Barley	cytosol	7.21	6.67
CDY22755	Canola	extracellular	6.31	5.74
Os08t0192200-01	Rice	nucleus	4.5	5.26
CDX74406	Canola	endoplasmic reticulum	8.11	3.85
CDY48229	Canola	cytosol, mitochondrion	2.7	1.97
GSMUA_Achr6P16520_001	Banana	nucleus	3.6	1.61
HORVU7Hr1G023920.2	Barley	cytosol, nucleus	2.7	1.5
HORVU7Hr1G023790.1	Barley	cytosol, mitochondrion, nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:CDY48230	EnsemblPlantsGene:GSBRNA2T00089087001	ncoils:Coil	PANTHER:PTHR34684	ProteinID:CDY48230	ProteinID:CDY48230.1
UniParc:UPI0004EE5E5A	UniProt:A0A078IBG2	MapMan:35.2	:	:	:

Description

BnaAnng09600DBnaAnng09600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IBG2]

Coordinates

chrLK032761:-:69601..70548

Molecular Weight (calculated)

12709.5 Da

IEP (calculated)

8.502

GRAVY (calculated)

-0.093

Length

111 amino acids

Sequence
(BLAST)

001: MRFTLSTPTS VQDSQLTSNL CVQAYMKATT LPAHICFDVQ CLLVLMDLET ENRIASVLLR EAAELRRQAE KDGVRAYLEK PNVRHRPNSR FSQQLSLVFN
101: NCVIFFCSLK Q

Best Arabidopsis Sequence Match ( AT4G33690.1 )
(BLAST)

001: MDLETENRIA SILLREAAEL RRQAEKDGVR AYLEKPNVRH RPNSRFLTAT VLGVQQANKA VETNEMWSLR SKEIEFGERL KRKSRDESSN GQSEQNNRRD
101: FLKRCTSVDE NVTTTSLSPS SSRSRSKRWQ SEDDDDEGLG DVEVKTFLQS RVKRGRGSVG AMMDEPLPCL PERELSRTSD TGDRKLVIQP ERSPLLRRRT
201: DSSSSDEEEV YKRAHRKRKE HKKKLSKKHK SKEKKRDRKK RKYGRD

Arabidopsis Description

At4g33690 [Source:UniProtKB/TrEMBL;Acc:Q6NPE9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.