Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72476 | Canola | cytosol | 65.22 | 54.55 |
| CDX72474 | Canola | cytosol | 61.96 | 51.35 |
| Bra017642.1-P | Field mustard | endoplasmic reticulum | 78.26 | 44.72 |
| AT3G25580.1 | Thale cress | nucleus | 66.3 | 29.05 |
| CDX69045 | Canola | cytosol | 60.87 | 26.67 |
| CDX75419 | Canola | nucleus | 60.87 | 26.67 |
| AT2G18990.1 | Thale cress | cytosol | 58.7 | 25.59 |
| KRG91066 | Soybean | cytoskeleton, cytosol, nucleus | 51.09 | 22.07 |
| Solyc11g012730.1.1 | Tomato | cytosol | 48.91 | 21.23 |
| VIT_03s0091g00380.t01 | Wine grape | cytosol | 46.74 | 20.28 |
| TraesCS3B01G432200.1 | Wheat | cytosol | 45.65 | 20.0 |
| TraesCS3A01G399200.1 | Wheat | cytosol | 45.65 | 20.0 |
| TraesCS3D01G393400.1 | Wheat | cytosol | 45.65 | 20.0 |
| Os08t0250700-01 | Rice | cytosol | 45.65 | 20.0 |
| KRH35706 | Soybean | cytosol | 45.65 | 19.72 |
| HORVU3Hr1G089950.1 | Barley | cytosol | 42.39 | 18.48 |
| Zm00001d050225_P001 | Maize | cytosol | 42.39 | 18.4 |
| PGSC0003DMT400034610 | Potato | cytosol | 42.39 | 18.22 |
| GSMUA_Achr9P21300_001 | Banana | cytosol | 41.3 | 18.01 |
| EES14790 | Sorghum | cytosol | 41.3 | 18.01 |
| CDY57635 | Canola | cytosol | 28.26 | 11.3 |
| CDY26529 | Canola | cytosol | 28.26 | 11.3 |
| CDX77968 | Canola | cytosol | 27.17 | 10.87 |
| CDX73765 | Canola | cytosol | 27.17 | 10.87 |
| KRH13153 | Soybean | cytosol | 5.43 | 3.25 |
Protein Annotations
| EnsemblPlants:CDY49291 | EnsemblPlantsGene:GSBRNA2T00092707001 | Gene3D:3.40.30.10 | PANTHER:PTHR21148 | PANTHER:PTHR21148:SF11 | ProteinID:CDY49291 |
| ProteinID:CDY49291.1 | SignalP:SignalP-noTM | UniParc:UPI0004EECA5C | UniProt:A0A078IH18 | MapMan:35.1 | : |
Description
BnaA03g51040DBnaA03g51040D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078IH18]
Coordinates
chrLK032822:-:121915..122281
Molecular Weight (calculated)
10540.2 Da
IEP (calculated)
9.689
GRAVY (calculated)
-0.798
Length
92 amino acids
Sequence
(BLAST)
(BLAST)
1: SKLRKVRSWL RGSRLWFFPL FALIKNTKVD DYVAGFNELG GKDDFSTDDL EDRLARAQVI HYEGESSSHK VKSMTQARRS VRQSANSDSD SE
001: MANPIQEILE KQVLTVAKAM EDKIDDEIAS LEKLDEDDLE VLRERRLKQM KKMAEKKKRW ISLGHGEYSE IHSEKDFFSV VKASERVVCH FYRENWPCKV
101: MDKHMSILAK QHIETRFVKI QAEKSPFLAE RLKIVVLPTL ALIKNTKVDD YVVGFNELGG KDDFSTEDLE ERIARAQVIH YDGESSSLKP KSTTQVRRNV
201: RQSARSDSDS E
101: MDKHMSILAK QHIETRFVKI QAEKSPFLAE RLKIVVLPTL ALIKNTKVDD YVVGFNELGG KDDFSTEDLE ERIARAQVIH YDGESSSLKP KSTTQVRRNV
201: RQSARSDSDS E
Arabidopsis Description
TXND9Thioredoxin domain-containing protein 9 homolog [Source:UniProtKB/Swiss-Prot;Acc:O64628]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.